FFCP PHASE1:Hg19::chr20:44937199..44937215,-: Difference between revisions
From FANTOM5_SSTAR
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64405 | |EntrezGene=64405 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13251 | |HGNC=13251 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-62bp_to_ENST00000537909,uc010ghk.1_5end | |||
|cluster_id=chr20:44937199..44937215,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_5_at_CDH22_5end | |||
|id=chr20:44937199..44937215,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.92e-24;3!UBERON:0006601;2.14e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.26e-64!57;UBERON:0005068!2.26e-64!57;UBERON:0006241!2.26e-64!57;UBERON:0007135!2.26e-64!57;UBERON:0001017!3.33e-56!82;UBERON:0000955!5.00e-56!69;UBERON:0006238!5.00e-56!69;UBERON:0005743!1.05e-55!86;UBERON:0002616!6.37e-52!59;UBERON:0000073!1.39e-51!94;UBERON:0001016!1.39e-51!94;UBERON:0003075!5.03e-51!86;UBERON:0007284!5.03e-51!86;UBERON:0002780!9.59e-50!41;UBERON:0001890!9.59e-50!41;UBERON:0006240!9.59e-50!41;UBERON:0003080!2.23e-48!42;UBERON:0002346!3.19e-48!90;UBERON:0001950!9.62e-44!20;UBERON:0002619!1.73e-43!22;UBERON:0007023!4.41e-41!115;UBERON:0001893!6.17e-39!34;UBERON:0000956!8.88e-38!25;UBERON:0000203!8.88e-38!25;UBERON:0002791!1.10e-36!33;UBERON:0003056!9.92e-36!61;UBERON:0002020!2.06e-35!34;UBERON:0003528!2.06e-35!34;UBERON:0000033!4.52e-35!123;UBERON:0001869!5.46e-35!32;UBERON:0000153!7.12e-33!129;UBERON:0007811!7.12e-33!129;UBERON:0004121!1.28e-31!169;UBERON:0000924!1.41e-30!173;UBERON:0006601!1.41e-30!173;UBERON:0000200!8.48e-17!6;UBERON:0001871!1.13e-16!7;UBERON:0003076!2.07e-16!15;UBERON:0003057!2.07e-16!15;UBERON:0001872!2.58e-14!5;UBERON:0000025!5.48e-14!194;UBERON:0001894!3.02e-12!7;UBERON:0006222!3.02e-12!7;UBERON:0000475!2.48e-11!365;UBERON:0004111!1.42e-10!241;UBERON:0003296!1.77e-10!4;UBERON:0010133!1.77e-10!4;UBERON:0004733!2.32e-10!12;UBERON:0002028!2.32e-10!12;UBERON:0007277!2.32e-10!12;UBERON:0004732!1.79e-09!13;UBERON:0002771!2.38e-09!3;UBERON:0000064!6.49e-09!219;UBERON:0002240!7.36e-09!3;UBERON:0002021!7.59e-09!5;UBERON:0000349!1.31e-08!5;UBERON:0000483!3.32e-08!309;UBERON:0000119!5.11e-08!312;UBERON:0000477!7.94e-08!286;UBERON:0002298!1.07e-07!8;UBERON:0002680!1.86e-07!9;UBERON:0001895!1.86e-07!9;UBERON:0010092!1.86e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.94e-66;20!UBERON:0002619;4.44e-60;22!UBERON:0000956;7.30e-53;25!UBERON:0000203;7.30e-53;25!UBERON:0001869;3.69e-41;32!UBERON:0001893;8.28e-40;34!UBERON:0002791;4.01e-35;32!UBERON:0003528;2.25e-33;34!UBERON:0002020;2.25e-33;34!UBERON:0000200;2.55e-30;6!UBERON:0000073;1.05e-26;53!UBERON:0002616;1.05e-26;53!UBERON:0002780;1.20e-26;41!UBERON:0001890;1.20e-26;41!UBERON:0001871;5.50e-26;6!UBERON:0000955;2.09e-25;68!UBERON:0001872;2.85e-24;5!UBERON:0001017;7.80e-23;75!UBERON:0001016;2.81e-20;83!UBERON:0002771;1.23e-15;2!UBERON:0002037;2.39e-12;6!UBERON:0001870;9.80e-11;3!UBERON:0004733;1.77e-10;12!UBERON:0002028;1.77e-10;12!UBERON:0004732;1.11e-09;13!UBERON:0011216;2.38e-09;132!UBERON:0002022;4.88e-09;1!UBERON:0002581;1.13e-08;1!UBERON:0002902;1.13e-08;1!UBERON:0009899;1.13e-08;1!UBERON:0007190;1.13e-08;1!UBERON:0007023;1.14e-08;114!UBERON:0002680;2.18e-08;9!UBERON:0001895;2.18e-08;9!UBERON:0002021;8.91e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,8.13e-67,20;UBERON:0002619,8.58e-61,22;UBERON:0001049,7.41e-54,56;UBERON:0005068,7.41e-54,56;UBERON:0006241,7.41e-54,56;UBERON:0007135,7.41e-54,56;UBERON:0000956,1.71e-53,25;UBERON:0000203,1.71e-53,25;UBERON:0000955,3.34e-52,68;UBERON:0006238,3.34e-52,68;UBERON:0001017,9.81e-52,81;UBERON:0000073,1.39e-51,53;UBERON:0002616,1.39e-51,53;UBERON:0001869,7.60e-48,32;UBERON:0001016,2.75e-46,89;UBERON:0001893,5.89e-45,34;UBERON:0002780,3.90e-42,41;UBERON:0001890,3.90e-42,41;UBERON:0003080,3.90e-42,41;UBERON:0006240,3.90e-42,41;UBERON:0002791,1.29e-41,32;UBERON:0003075,1.70e-39,82;UBERON:0007284,1.70e-39,82;UBERON:0003528,4.30e-39,34;UBERON:0002020,4.30e-39,34;UBERON:0002346,1.66e-37,86;UBERON:0003056,2.89e-31,61;UBERON:0000200,1.08e-30,6;UBERON:0010371,2.02e-30,104;UBERON:0007023,8.90e-28,114;UBERON:0001871,1.33e-26,6;UBERON:0001872,1.94e-24,5;UBERON:0010314,3.36e-23,132;UBERON:0004121,1.46e-22,171;UBERON:0000924,1.46e-22,171;UBERON:0006601,1.46e-22,171;UBERON:0011216,6.29e-18,223;UBERON:0002771,4.00e-16,2;UBERON:0000025,9.11e-15,192;UBERON:0003076,1.50e-12,15;UBERON:0003057,1.50e-12,15;UBERON:0002037,2.39e-12,6;UBERON:0006215,2.39e-12,6;UBERON:0004111,5.03e-11,240;UBERON:0001870,1.20e-10,3;UBERON:0004733,1.86e-10,12;UBERON:0002028,1.86e-10,12;UBERON:0007277,1.86e-10,12;UBERON:0004732,1.16e-09,13;UBERON:0002022,4.89e-09,1;UBERON:0002581,7.75e-09,1;UBERON:0002902,8.36e-09,1;UBERON:0009899,8.36e-09,1;UBERON:0000483,9.36e-09,306;UBERON:0007190,1.22e-08,1;UBERON:0000119,1.25e-08,309;UBERON:0002680,2.18e-08,9;UBERON:0001895,2.18e-08,9;UBERON:0010092,2.18e-08,9;UBERON:0002021,7.26e-07,5 | |||
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| ||
|short_description=p5@CDH22 | |||
}} | }} |
Latest revision as of 14:43, 16 September 2015
Short description: | p5@CDH22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CDH22_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -62bp_to_ENST00000537909, uc010ghk.1_5end |
EntrezGene: | CDH22 |
HGNC: | 13251 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data