FFCP PHASE1:Hg19::chr1:149889382..149889404,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9900 | |EntrezGene=9900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20566 | |HGNC=20566 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000369145_5end | |association_with_transcript=0bp_to_ENST00000369145_5end | ||
|cluster_id=chr1:149889382..149889404,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_SV2A_5end | |description=CAGE_peak_1_at_SV2A_5end | ||
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|ontology_enrichment_celltype=CL:0000055!5.20e-25!180;CL:0000133!4.52e-13!59;CL:0000333!1.46e-11!41;CL:0002319!9.66e-11!25;CL:0000221!2.85e-09!71;CL:0000057!1.95e-08!75;CL:0000393!7.21e-08!60;CL:0000211!7.21e-08!60;CL:0000095!1.31e-07!17;CL:0000123!1.31e-07!17;CL:0000243!5.83e-07!15;CL:0000125!5.83e-07!15;CL:0000030!5.83e-07!15;CL:0000339!5.83e-07!15 | |ontology_enrichment_celltype=CL:0000055!5.20e-25!180;CL:0000133!4.52e-13!59;CL:0000333!1.46e-11!41;CL:0002319!9.66e-11!25;CL:0000221!2.85e-09!71;CL:0000057!1.95e-08!75;CL:0000393!7.21e-08!60;CL:0000211!7.21e-08!60;CL:0000095!1.31e-07!17;CL:0000123!1.31e-07!17;CL:0000243!5.83e-07!15;CL:0000125!5.83e-07!15;CL:0000030!5.83e-07!15;CL:0000339!5.83e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002319;4.89e-11;25!CL:0000095;8.28e-08;17!CL:0000243;3.93e-07;15!CL:0000125;3.93e-07;15 | |ontology_enrichment_celltype_v019=CL:0002319;4.89e-11;25!CL:0000095;8.28e-08;17!CL:0000243;3.93e-07;15!CL:0000125;3.93e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000133,2.31e-13,59;CL:0000333,6.86e-12,41;CL:0002319,4.84e-11,25;CL:0000221,2.53e-09,72;CL:0000057,6.00e-09,76;CL:0000393,2.31e-08,61;CL:0000211,2.31e-08,61;CL:0000095,8.29e-08,17;CL:0000123,8.29e-08,17;CL:0000243,3.87e-07,15;CL:0000125,3.87e-07,15;CL:0000030,3.87e-07,15;CL:0000339,3.87e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.89e-09;82!CL:0000133;3.22e-07;59!CL:0000339;3.93e-07;15 | |ontology_enrichment_development_v019=UBERON:0006601;8.89e-09;82!CL:0000133;3.22e-07;59!CL:0000339;3.93e-07;15 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;6.86e-19;32!UBERON:0003528;7.43e-19;34!UBERON:0002020;7.43e-19;34!UBERON:0001893;8.24e-19;34!UBERON:0002791;1.25e-18;32!UBERON:0000073;1.83e-18;53!UBERON:0002616;1.83e-18;53!UBERON:0002780;2.70e-18;41!UBERON:0001890;2.70e-18;41!UBERON:0000956;1.80e-16;25!UBERON:0000203;1.80e-16;25!UBERON:0000955;2.08e-16;68!UBERON:0001017;3.59e-16;75!UBERON:0002619;2.46e-15;22!UBERON:0001016;4.19e-15;83!UBERON:0001950;4.45e-14;20!UBERON:0004732;1.27e-08;13!UBERON:0004733;4.20e-08;12!UBERON:0002028;4.20e-08;12!UBERON:0011216;4.71e-08;132!UBERON:0010314;2.23e-07;132!UBERON:0000125;7.67e-07;9!UBERON:0002308;7.67e-07;9!UBERON:0002420;9.06e-07;9!UBERON:0007245;9.06e-07;9!UBERON:0010009;9.06e-07;9!UBERON:0010011;9.06e-07;9!UBERON:0000454;9.06e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0001869;6.86e-19;32!UBERON:0003528;7.43e-19;34!UBERON:0002020;7.43e-19;34!UBERON:0001893;8.24e-19;34!UBERON:0002791;1.25e-18;32!UBERON:0000073;1.83e-18;53!UBERON:0002616;1.83e-18;53!UBERON:0002780;2.70e-18;41!UBERON:0001890;2.70e-18;41!UBERON:0000956;1.80e-16;25!UBERON:0000203;1.80e-16;25!UBERON:0000955;2.08e-16;68!UBERON:0001017;3.59e-16;75!UBERON:0002619;2.46e-15;22!UBERON:0001016;4.19e-15;83!UBERON:0001950;4.45e-14;20!UBERON:0004732;1.27e-08;13!UBERON:0004733;4.20e-08;12!UBERON:0002028;4.20e-08;12!UBERON:0011216;4.71e-08;132!UBERON:0010314;2.23e-07;132!UBERON:0000125;7.67e-07;9!UBERON:0002308;7.67e-07;9!UBERON:0002420;9.06e-07;9!UBERON:0007245;9.06e-07;9!UBERON:0010009;9.06e-07;9!UBERON:0010011;9.06e-07;9!UBERON:0000454;9.06e-07;9 | ||
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| ||
|short_description=p1@SV2A | |short_description=p1@SV2A | ||
}} | }} |
Latest revision as of 20:49, 16 September 2015
Short description: | p1@SV2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SV2A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000369145_5end |
EntrezGene: | SV2A |
HGNC: | 20566 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 2.31e-13 | 59 |
migratory neural crest cell | 6.86e-12 | 41 |
neural cell | 4.84e-11 | 25 |
ectodermal cell | 2.53e-09 | 72 |
fibroblast | 6.00e-09 | 76 |
electrically responsive cell | 2.31e-08 | 61 |
electrically active cell | 2.31e-08 | 61 |
neuron associated cell | 8.29e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 8.29e-08 | 17 |
glial cell (sensu Vertebrata) | 3.87e-07 | 15 |
glial cell | 3.87e-07 | 15 |
glioblast | 3.87e-07 | 15 |
glioblast (sensu Vertebrata) | 3.87e-07 | 15 |