FFCP PHASE1:Hg19::chr13:29069256..29069272,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2321 | |EntrezGene=2321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3763 | |HGNC=3763 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBM6,P17948 | |UniProt=F8WBM6,P17948 | ||
|association_with_transcript=0bp_to_ENST00000450836,ENST00000539099,ENST00000541932,NM_001159920,NM_001160030,NM_001160031,NM_002019,uc001usb.3,uc001usc.3,uc001usd.2,uc010aar.1,uc010tdp.1_5end | |association_with_transcript=0bp_to_ENST00000450836,ENST00000539099,ENST00000541932,NM_001159920,NM_001160030,NM_001160031,NM_002019,uc001usb.3,uc001usc.3,uc001usd.2,uc010aar.1,uc010tdp.1_5end | ||
|cluster_id=chr13:29069256..29069272,- | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_1_at_FLT1_5end | |description=CAGE_peak_1_at_FLT1_5end | ||
|id=chr13:29069256..29069272,- | |id=chr13:29069256..29069272,- | ||
|ontology_enrichment_celltype=CL:0002057!1.77e-12!42;CL:0000860!2.12e-10!45;CL:0002139!7.77e-09!24;CL:0002009!1.23e-08!65;CL:0000115!1.63e-08!35;CL:0000766!2.23e-08!76;CL:0002194!5.68e-08!63;CL:0000576!5.68e-08!63;CL:0000040!5.68e-08!63;CL:0000559!5.68e-08!63;CL:0000557!7.90e-08!71;CL:0000071!1.73e-07!18;CL:0002546!1.73e-07!18;CL:0000839!7.54e-07!70 | |ontology_enrichment_celltype=CL:0002057!1.77e-12!42;CL:0000860!2.12e-10!45;CL:0002139!7.77e-09!24;CL:0002009!1.23e-08!65;CL:0000115!1.63e-08!35;CL:0000766!2.23e-08!76;CL:0002194!5.68e-08!63;CL:0000576!5.68e-08!63;CL:0000040!5.68e-08!63;CL:0000559!5.68e-08!63;CL:0000557!7.90e-08!71;CL:0000071!1.73e-07!18;CL:0002546!1.73e-07!18;CL:0000839!7.54e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.77e-13;33!CL:0002057;1.77e-13;33!CL:0000473;6.05e-11;39!CL:0000234;6.05e-11;39!CL:0002139;1.08e-09;24!CL:0000115;1.57e-08;36!CL:0000071;3.07e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.65e-11,42;CL:0002057,1.65e-11,42;CL:0000473,1.67e-11,48;CL:0000234,1.67e-11,48;CL:0000115,8.77e-10,36;CL:0002139,9.05e-10,24;CL:0002009,9.17e-10,61;CL:0002194,5.38e-09,59;CL:0000576,5.38e-09,59;CL:0000040,5.38e-09,59;CL:0000559,5.38e-09,59;CL:0000766,1.22e-08,72;CL:0000557,2.01e-08,67;CL:0000071,2.98e-08,18;CL:0002546,2.98e-08,18;CL:0000839,2.16e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;6.22e-09;42!CL:0002546;3.07e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.85e-36!115;UBERON:0001049!9.67e-18!57;UBERON:0005068!9.67e-18!57;UBERON:0006241!9.67e-18!57;UBERON:0007135!9.67e-18!57;UBERON:0003075!2.50e-15!86;UBERON:0007284!2.50e-15!86;UBERON:0001017!4.61e-15!82;UBERON:0003080!8.00e-15!42;UBERON:0002616!1.38e-14!59;UBERON:0005743!2.21e-14!86;UBERON:0002780!3.05e-14!41;UBERON:0001890!3.05e-14!41;UBERON:0006240!3.05e-14!41;UBERON:0002346!1.25e-13!90;UBERON:0000955!4.05e-13!69;UBERON:0006238!4.05e-13!69;UBERON:0002020!2.65e-12!34;UBERON:0003528!2.65e-12!34;UBERON:0000468!4.89e-12!659;UBERON:0001893!5.80e-12!34;UBERON:0000073!9.76e-12!94;UBERON:0001016!9.76e-12!94;UBERON:0002791!1.34e-11!33;UBERON:0003056!2.95e-11!61;UBERON:0001869!4.04e-11!32;UBERON:0003081!8.73e-11!216;UBERON:0000467!1.65e-10!625;UBERON:0000480!2.59e-10!626;UBERON:0004111!9.23e-10!241;UBERON:0000062!1.39e-09!511;UBERON:0002619!1.57e-09!22;UBERON:0000025!1.61e-09!194;UBERON:0000153!4.22e-09!129;UBERON:0007811!4.22e-09!129;UBERON:0000033!1.14e-08!123;UBERON:0001950!1.37e-08!20;UBERON:0000956!3.52e-08!25;UBERON:0000203!3.52e-08!25;UBERON:0000477!4.97e-08!286;UBERON:0004121!1.39e-07!169;UBERON:0001986!1.73e-07!18;UBERON:0004638!1.73e-07!18;UBERON:0004852!1.73e-07!18;UBERON:0000922!2.78e-07!612;UBERON:0000924!7.01e-07!173;UBERON:0006601!7.01e-07!173 | |ontology_enrichment_uberon=UBERON:0007023!3.85e-36!115;UBERON:0001049!9.67e-18!57;UBERON:0005068!9.67e-18!57;UBERON:0006241!9.67e-18!57;UBERON:0007135!9.67e-18!57;UBERON:0003075!2.50e-15!86;UBERON:0007284!2.50e-15!86;UBERON:0001017!4.61e-15!82;UBERON:0003080!8.00e-15!42;UBERON:0002616!1.38e-14!59;UBERON:0005743!2.21e-14!86;UBERON:0002780!3.05e-14!41;UBERON:0001890!3.05e-14!41;UBERON:0006240!3.05e-14!41;UBERON:0002346!1.25e-13!90;UBERON:0000955!4.05e-13!69;UBERON:0006238!4.05e-13!69;UBERON:0002020!2.65e-12!34;UBERON:0003528!2.65e-12!34;UBERON:0000468!4.89e-12!659;UBERON:0001893!5.80e-12!34;UBERON:0000073!9.76e-12!94;UBERON:0001016!9.76e-12!94;UBERON:0002791!1.34e-11!33;UBERON:0003056!2.95e-11!61;UBERON:0001869!4.04e-11!32;UBERON:0003081!8.73e-11!216;UBERON:0000467!1.65e-10!625;UBERON:0000480!2.59e-10!626;UBERON:0004111!9.23e-10!241;UBERON:0000062!1.39e-09!511;UBERON:0002619!1.57e-09!22;UBERON:0000025!1.61e-09!194;UBERON:0000153!4.22e-09!129;UBERON:0007811!4.22e-09!129;UBERON:0000033!1.14e-08!123;UBERON:0001950!1.37e-08!20;UBERON:0000956!3.52e-08!25;UBERON:0000203!3.52e-08!25;UBERON:0000477!4.97e-08!286;UBERON:0004121!1.39e-07!169;UBERON:0001986!1.73e-07!18;UBERON:0004638!1.73e-07!18;UBERON:0004852!1.73e-07!18;UBERON:0000922!2.78e-07!612;UBERON:0000924!7.01e-07!173;UBERON:0006601!7.01e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.51e-12;41!UBERON:0001890;8.51e-12;41!UBERON:0003528;1.91e-11;34!UBERON:0002020;1.91e-11;34!UBERON:0002791;3.91e-11;32!UBERON:0001893;3.91e-11;34!UBERON:0001869;5.73e-11;32!UBERON:0007023;7.69e-11;114!UBERON:0000073;1.11e-10;53!UBERON:0002616;1.11e-10;53!UBERON:0002619;1.51e-10;22!UBERON:0001950;1.73e-09;20!UBERON:0000956;7.26e-09;25!UBERON:0000203;7.26e-09;25!UBERON:0004638;3.07e-08;18!UBERON:0001986;3.07e-08;18!UBERON:0004852;3.07e-08;18!UBERON:0001017;7.43e-07;75 | |||
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| ||
|short_description=p1@FLT1 | |short_description=p1@FLT1 | ||
}} | }} |
Latest revision as of 00:45, 17 September 2015
Short description: | p1@FLT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FLT1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000450836, ENST00000539099, ENST00000541932, NM_001159920, NM_001160030, NM_001160031, NM_002019, uc001usb.3, uc001usc.3, uc001usd.2, uc010aar.1, uc010tdp.1_5end |
EntrezGene: | FLT1 |
HGNC: | 3763 |
UniProt: | F8WBM6P17948 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.65e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.65e-11 | 42 |
defensive cell | 1.67e-11 | 48 |
phagocyte | 1.67e-11 | 48 |
endothelial cell | 8.77e-10 | 36 |
endothelial cell of vascular tree | 9.05e-10 | 24 |
macrophage dendritic cell progenitor | 9.17e-10 | 61 |
monopoietic cell | 5.38e-09 | 59 |
monocyte | 5.38e-09 | 59 |
monoblast | 5.38e-09 | 59 |
promonocyte | 5.38e-09 | 59 |
myeloid leukocyte | 1.22e-08 | 72 |
granulocyte monocyte progenitor cell | 2.01e-08 | 67 |
blood vessel endothelial cell | 2.98e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.98e-08 | 18 |
myeloid lineage restricted progenitor cell | 2.16e-07 | 66 |