FFCP PHASE1:Hg19::chr9:34179030..34179064,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51271 | |EntrezGene=51271 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12461 | |HGNC=12461 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000379186_5end | |association_with_transcript=0bp_to_ENST00000379186_5end | ||
|cluster_id=chr9:34179030..34179064,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_UBAP1_5end | |description=CAGE_peak_1_at_UBAP1_5end | ||
|id=chr9:34179030..34179064,+ | |id=chr9:34179030..34179064,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.07e-18!42;CL:0000766!8.53e-18!76;CL:0000860!2.94e-17!45;CL:0000557!5.68e-15!71;CL:0000839!1.39e-14!70;CL:0002009!2.07e-13!65;CL:0002194!1.68e-12!63;CL:0000576!1.68e-12!63;CL:0000040!1.68e-12!63;CL:0000559!1.68e-12!63 | |ontology_enrichment_celltype=CL:0002057!1.07e-18!42;CL:0000766!8.53e-18!76;CL:0000860!2.94e-17!45;CL:0000557!5.68e-15!71;CL:0000839!1.39e-14!70;CL:0002009!2.07e-13!65;CL:0002194!1.68e-12!63;CL:0000576!1.68e-12!63;CL:0000040!1.68e-12!63;CL:0000559!1.68e-12!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.30e-18;33!CL:0002057;1.30e-18;33!CL:0000473;2.49e-14;39!CL:0000234;2.49e-14;39!CL:0000576;1.21e-10;48!CL:0000766;4.03e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.03e-18,72;CL:0000860,1.07e-18,42;CL:0002057,1.07e-18,42;CL:0000473,1.87e-17,48;CL:0000234,1.87e-17,48;CL:0000557,8.46e-16,67;CL:0000839,2.13e-15,66;CL:0002009,3.22e-14,61;CL:0002194,2.82e-13,59;CL:0000576,2.82e-13,59;CL:0000040,2.82e-13,59;CL:0000559,2.82e-13,59;CL:0000763,6.24e-07,108;CL:0000049,6.24e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;4.57e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.55e-22!115;UBERON:0002390!3.57e-15!102;UBERON:0003061!3.57e-15!102;UBERON:0002193!1.82e-14!112;UBERON:0002371!1.40e-13!80;UBERON:0001474!1.09e-11!86;UBERON:0000467!8.71e-11!625;UBERON:0002405!9.86e-11!115;UBERON:0001049!1.11e-10!57;UBERON:0005068!1.11e-10!57;UBERON:0006241!1.11e-10!57;UBERON:0007135!1.11e-10!57;UBERON:0002050!1.34e-10!605;UBERON:0005423!1.34e-10!605;UBERON:0000480!1.42e-10!626;UBERON:0000923!1.47e-10!604;UBERON:0005291!1.47e-10!604;UBERON:0006598!1.47e-10!604;UBERON:0002532!1.47e-10!604;UBERON:0003081!2.72e-10!216;UBERON:0000062!2.97e-10!511;UBERON:0003075!7.78e-10!86;UBERON:0007284!7.78e-10!86;UBERON:0000922!9.13e-10!612;UBERON:0004765!1.98e-09!101;UBERON:0001434!1.98e-09!101;UBERON:0000468!9.14e-09!659;UBERON:0002616!9.46e-09!59;UBERON:0002346!3.50e-08!90;UBERON:0003080!7.83e-08!42;UBERON:0002780!1.49e-07!41;UBERON:0001890!1.49e-07!41;UBERON:0006240!1.49e-07!41;UBERON:0005743!2.90e-07!86;UBERON:0003056!3.26e-07!61;UBERON:0000955!4.61e-07!69;UBERON:0006238!4.61e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.12e-22,114;UBERON:0002390,9.60e-16,98;UBERON:0003061,9.60e-16,98;UBERON:0002193,5.88e-15,108;UBERON:0002371,3.07e-14,76;UBERON:0005423,2.44e-12,581;UBERON:0001474,3.28e-12,82;UBERON:0004765,6.85e-12,90;UBERON:0002405,7.85e-12,93;UBERON:0002050,3.39e-11,564;UBERON:0000922,1.33e-10,592;UBERON:0000923,1.73e-10,560;UBERON:0010316,1.73e-10,560;UBERON:0005291,1.73e-10,560;UBERON:0006598,1.73e-10,560;UBERON:0010317,1.73e-10,560;UBERON:0002532,1.73e-10,560;UBERON:0001049,2.15e-10,56;UBERON:0005068,2.15e-10,56;UBERON:0006241,2.15e-10,56;UBERON:0007135,2.15e-10,56;UBERON:0003075,3.77e-10,82;UBERON:0007284,3.77e-10,82;UBERON:0000073,1.18e-09,53;UBERON:0002616,1.18e-09,53;UBERON:0010371,2.80e-09,104;UBERON:0001434,3.65e-09,100;UBERON:0003081,3.81e-09,203;UBERON:0002346,2.04e-08,86;UBERON:0002780,1.49e-07,41;UBERON:0001890,1.49e-07,41;UBERON:0003080,1.49e-07,41;UBERON:0006240,1.49e-07,41;UBERON:0003056,2.83e-07,61;UBERON:0000955,7.98e-07,68;UBERON:0006238,7.98e-07,68 | |||
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|short_description=p1@UBAP1 | |short_description=p1@UBAP1 | ||
}} | }} |
Latest revision as of 04:50, 17 September 2015
Short description: | p1@UBAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UBAP1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000379186_5end |
EntrezGene: | UBAP1 |
HGNC: | 12461 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.03e-18 | 72 |
classical monocyte | 1.07e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.07e-18 | 42 |
defensive cell | 1.87e-17 | 48 |
phagocyte | 1.87e-17 | 48 |
granulocyte monocyte progenitor cell | 8.46e-16 | 67 |
myeloid lineage restricted progenitor cell | 2.13e-15 | 66 |
macrophage dendritic cell progenitor | 3.22e-14 | 61 |
monopoietic cell | 2.82e-13 | 59 |
monocyte | 2.82e-13 | 59 |
monoblast | 2.82e-13 | 59 |
promonocyte | 2.82e-13 | 59 |
myeloid cell | 6.24e-07 | 108 |
common myeloid progenitor | 6.24e-07 | 108 |