FFCP PHASE1:Hg19::chr2:50148868..50148876,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9378 | |EntrezGene=9378 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8008 | |HGNC=8008 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=104bp_to_AF087975_5end | |association_with_transcript=104bp_to_AF087975_5end | ||
|cluster_id=chr2:50148868..50148876,- | |||
|coexpression_cluster_id=C552 | |coexpression_cluster_id=C552 | ||
|description=CAGE_peak_32_at_NRXN1_5end | |description=CAGE_peak_32_at_NRXN1_5end | ||
|id=chr2:50148868..50148876,- | |id=chr2:50148868..50148876,- | ||
|ontology_enrichment_celltype=CL:0000242!1.02e-08!2 | |ontology_enrichment_celltype=CL:0000242!1.02e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000047;7.03e-08;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.02e-55!57;UBERON:0005068!7.02e-55!57;UBERON:0006241!7.02e-55!57;UBERON:0007135!7.02e-55!57;UBERON:0001017!3.48e-50!82;UBERON:0005743!1.61e-47!86;UBERON:0002020!5.20e-46!34;UBERON:0003528!5.20e-46!34;UBERON:0002616!1.32e-45!59;UBERON:0002780!2.13e-45!41;UBERON:0001890!2.13e-45!41;UBERON:0006240!2.13e-45!41;UBERON:0000073!6.27e-45!94;UBERON:0001016!6.27e-45!94;UBERON:0001869!1.93e-44!32;UBERON:0003080!3.33e-44!42;UBERON:0000955!1.36e-43!69;UBERON:0006238!1.36e-43!69;UBERON:0002619!1.19e-42!22;UBERON:0001893!1.32e-41!34;UBERON:0002791!8.31e-39!33;UBERON:0000956!2.94e-37!25;UBERON:0000203!2.94e-37!25;UBERON:0003075!1.10e-36!86;UBERON:0007284!1.10e-36!86;UBERON:0001950!6.45e-36!20;UBERON:0002346!9.82e-35!90;UBERON:0003056!7.66e-29!61;UBERON:0007023!1.61e-25!115;UBERON:0004121!1.08e-24!169;UBERON:0000924!6.23e-24!173;UBERON:0006601!6.23e-24!173;UBERON:0000033!3.34e-23!123;UBERON:0000153!8.58e-22!129;UBERON:0007811!8.58e-22!129;UBERON:0000349!4.44e-20!5;UBERON:0001871!2.50e-18!7;UBERON:0000200!8.68e-17!6;UBERON:0002771!5.23e-13!3;UBERON:0003076!1.18e-11!15;UBERON:0003057!1.18e-11!15;UBERON:0000025!3.51e-11!194;UBERON:0002420!9.47e-11!9;UBERON:0007245!9.47e-11!9;UBERON:0010009!9.47e-11!9;UBERON:0010011!9.47e-11!9;UBERON:0000454!9.47e-11!9;UBERON:0002308!3.01e-10!9;UBERON:0000125!3.01e-10!9;UBERON:0001876!1.60e-09!2;UBERON:0001870!3.62e-09!2;UBERON:0001954!4.08e-09!2;UBERON:0003022!4.08e-09!2;UBERON:0002421!4.08e-09!2;UBERON:0002600!4.08e-09!2;UBERON:0001905!6.09e-09!2;UBERON:0002757!6.09e-09!2;UBERON:0010134!6.09e-09!2;UBERON:0002784!6.09e-09!2;UBERON:0005408!6.09e-09!2;UBERON:0001899!6.09e-09!2;UBERON:0002148!1.50e-08!2;UBERON:0009662!1.50e-08!2;UBERON:0002021!2.75e-08!5;UBERON:0001872!3.84e-08!5;UBERON:0004733!8.32e-08!12;UBERON:0002028!8.32e-08!12;UBERON:0007277!8.32e-08!12;UBERON:0004111!1.11e-07!241;UBERON:0000483!1.57e-07!309;UBERON:0000064!1.78e-07!219;UBERON:0000119!2.19e-07!312;UBERON:0004732!3.50e-07!13;UBERON:0002680!4.63e-07!9;UBERON:0001895!4.63e-07!9;UBERON:0010092!4.63e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!7.02e-55!57;UBERON:0005068!7.02e-55!57;UBERON:0006241!7.02e-55!57;UBERON:0007135!7.02e-55!57;UBERON:0001017!3.48e-50!82;UBERON:0005743!1.61e-47!86;UBERON:0002020!5.20e-46!34;UBERON:0003528!5.20e-46!34;UBERON:0002616!1.32e-45!59;UBERON:0002780!2.13e-45!41;UBERON:0001890!2.13e-45!41;UBERON:0006240!2.13e-45!41;UBERON:0000073!6.27e-45!94;UBERON:0001016!6.27e-45!94;UBERON:0001869!1.93e-44!32;UBERON:0003080!3.33e-44!42;UBERON:0000955!1.36e-43!69;UBERON:0006238!1.36e-43!69;UBERON:0002619!1.19e-42!22;UBERON:0001893!1.32e-41!34;UBERON:0002791!8.31e-39!33;UBERON:0000956!2.94e-37!25;UBERON:0000203!2.94e-37!25;UBERON:0003075!1.10e-36!86;UBERON:0007284!1.10e-36!86;UBERON:0001950!6.45e-36!20;UBERON:0002346!9.82e-35!90;UBERON:0003056!7.66e-29!61;UBERON:0007023!1.61e-25!115;UBERON:0004121!1.08e-24!169;UBERON:0000924!6.23e-24!173;UBERON:0006601!6.23e-24!173;UBERON:0000033!3.34e-23!123;UBERON:0000153!8.58e-22!129;UBERON:0007811!8.58e-22!129;UBERON:0000349!4.44e-20!5;UBERON:0001871!2.50e-18!7;UBERON:0000200!8.68e-17!6;UBERON:0002771!5.23e-13!3;UBERON:0003076!1.18e-11!15;UBERON:0003057!1.18e-11!15;UBERON:0000025!3.51e-11!194;UBERON:0002420!9.47e-11!9;UBERON:0007245!9.47e-11!9;UBERON:0010009!9.47e-11!9;UBERON:0010011!9.47e-11!9;UBERON:0000454!9.47e-11!9;UBERON:0002308!3.01e-10!9;UBERON:0000125!3.01e-10!9;UBERON:0001876!1.60e-09!2;UBERON:0001870!3.62e-09!2;UBERON:0001954!4.08e-09!2;UBERON:0003022!4.08e-09!2;UBERON:0002421!4.08e-09!2;UBERON:0002600!4.08e-09!2;UBERON:0001905!6.09e-09!2;UBERON:0002757!6.09e-09!2;UBERON:0010134!6.09e-09!2;UBERON:0002784!6.09e-09!2;UBERON:0005408!6.09e-09!2;UBERON:0001899!6.09e-09!2;UBERON:0002148!1.50e-08!2;UBERON:0009662!1.50e-08!2;UBERON:0002021!2.75e-08!5;UBERON:0001872!3.84e-08!5;UBERON:0004733!8.32e-08!12;UBERON:0002028!8.32e-08!12;UBERON:0007277!8.32e-08!12;UBERON:0004111!1.11e-07!241;UBERON:0000483!1.57e-07!309;UBERON:0000064!1.78e-07!219;UBERON:0000119!2.19e-07!312;UBERON:0004732!3.50e-07!13;UBERON:0002680!4.63e-07!9;UBERON:0001895!4.63e-07!9;UBERON:0010092!4.63e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.02e-74;20!UBERON:0002619;3.85e-68;22!UBERON:0000956;3.60e-60;25!UBERON:0000203;3.60e-60;25!UBERON:0001869;7.45e-46;32!UBERON:0002791;2.69e-44;32!UBERON:0003528;3.22e-39;34!UBERON:0002020;3.22e-39;34!UBERON:0001893;3.92e-39;34!UBERON:0002780;7.17e-31;41!UBERON:0001890;7.17e-31;41!UBERON:0001871;1.13e-30;6!UBERON:0001876;1.71e-27;2!UBERON:0000073;7.98e-27;53!UBERON:0002616;7.98e-27;53!UBERON:0002021;1.30e-24;5!UBERON:0001872;2.19e-24;5!UBERON:0000955;9.29e-16;68!UBERON:0001016;1.83e-15;83!UBERON:0001017;1.49e-14;75!UBERON:0000349;1.31e-11;5!UBERON:0000200;6.94e-10;6!UBERON:0002771;3.69e-08;2!UBERON:0001905;7.03e-08;2!UBERON:0002702;7.03e-08;2!UBERON:0002757;7.03e-08;2!UBERON:0010134;7.03e-08;2!UBERON:0005408;7.03e-08;2!UBERON:0001899;7.03e-08;2!UBERON:0002420;7.75e-07;9!UBERON:0007245;7.75e-07;9!UBERON:0010009;7.75e-07;9!UBERON:0010011;7.75e-07;9!UBERON:0000454;7.75e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,8.02e-75,20;UBERON:0002619,3.09e-68,22;UBERON:0000956,2.96e-60,25;UBERON:0000203,2.96e-60,25;UBERON:0002791,2.88e-47,32;UBERON:0001869,2.88e-47,32;UBERON:0003528,1.65e-44,34;UBERON:0002020,1.65e-44,34;UBERON:0001893,1.65e-44,34;UBERON:0002780,6.69e-44,41;UBERON:0001890,6.69e-44,41;UBERON:0003080,6.69e-44,41;UBERON:0006240,6.69e-44,41;UBERON:0000073,7.66e-40,53;UBERON:0002616,7.66e-40,53;UBERON:0001049,1.11e-37,56;UBERON:0005068,1.11e-37,56;UBERON:0006241,1.11e-37,56;UBERON:0007135,1.11e-37,56;UBERON:0001871,1.05e-30,6;UBERON:0000955,1.90e-30,68;UBERON:0006238,1.90e-30,68;UBERON:0001017,1.09e-29,81;UBERON:0003056,2.32e-29,61;UBERON:0001876,1.83e-27,2;UBERON:0001016,1.19e-26,89;UBERON:0003075,1.79e-25,82;UBERON:0007284,1.79e-25,82;UBERON:0002021,1.02e-24,5;UBERON:0002346,3.07e-24,86;UBERON:0001872,3.13e-24,5;UBERON:0010371,7.54e-20,104;UBERON:0010314,2.28e-15,132;UBERON:0004121,2.14e-13,171;UBERON:0000924,2.14e-13,171;UBERON:0006601,2.14e-13,171;UBERON:0011216,1.32e-11,223;UBERON:0000349,1.35e-11,5;UBERON:0007023,1.67e-10,114;UBERON:0000025,4.05e-10,192;UBERON:0000200,5.94e-10,6;UBERON:0002771,3.82e-08,2;UBERON:0002702,5.37e-08,2;UBERON:0004111,8.80e-08,240;UBERON:0001905,9.19e-08,2;UBERON:0002757,9.19e-08,2;UBERON:0010134,9.19e-08,2;UBERON:0005408,9.19e-08,2;UBERON:0001899,9.19e-08,2;UBERON:0002420,7.87e-07,9;UBERON:0007245,7.87e-07,9;UBERON:0010009,7.87e-07,9;UBERON:0010011,7.87e-07,9;UBERON:0000454,7.87e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,2.98244294329889,1.1253553312841,0,0,0.844501632511974,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0.344743373241465,0,0.347249989866585,0,0.361789315876224,0,0.331737779793674,1.18219047581419,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,1.53036380815245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.379864775735272,0,0,0,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.953423842781029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,3.78281421196086,0.876336514945499,0,0.221858103073705,0,0,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.128458450192919,0,1.75597244962866,2.46139637088906,2.7727886584389,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,2.34323429584154,1.2401207790071,0,1.09394961803644,0,0,0,0,1.07140367175657,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,3.9271562130634,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,2.98244294329889,1.1253553312841,0,0,0.844501632511974,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0.344743373241465,0,0.347249989866585,0,0.361789315876224,0,0.331737779793674,1.18219047581419,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,1.53036380815245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.379864775735272,0,0,0,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.953423842781029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,3.78281421196086,0.876336514945499,0,0.221858103073705,0,0,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.128458450192919,0,1.75597244962866,2.46139637088906,2.7727886584389,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,2.34323429584154,1.2401207790071,0,1.09394961803644,0,0,0,0,1.07140367175657,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,3.9271562130634,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p32@NRXN1 | |short_description=p32@NRXN1 | ||
}} | }} |
Latest revision as of 13:16, 17 September 2015
Short description: | p32@NRXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_NRXN1_5end |
Coexpression cluster: | C552_medial_temporal_occipital_parietal_duodenum_brain_spinal |
Association with transcript: | 104bp_to_AF087975_5end |
EntrezGene: | NRXN1 |
HGNC: | 8008 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data