FFCP PHASE1:Hg19::chr7:20370483..20370513,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3696 | |EntrezGene=3696 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6163 | |HGNC=6163 | ||
|TSSclassifier=strong | |||
|UniProt=B4DHD4 | |UniProt=B4DHD4 | ||
|association_with_transcript=158bp_to_ENST00000537992,uc011jyh.1_5end | |association_with_transcript=158bp_to_ENST00000537992,uc011jyh.1_5end | ||
|cluster_id=chr7:20370483..20370513,+ | |||
|coexpression_cluster_id=C1537 | |coexpression_cluster_id=C1537 | ||
|description=CAGE_peak_3_at_ITGB8_5end | |description=CAGE_peak_3_at_ITGB8_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000507;7.93e-08;10!CL:1000494;7.93e-08;10 | |ontology_enrichment_celltype_v019=CL:1000507;7.93e-08;10!CL:1000494;7.93e-08;10 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,8.20e-08,10;CL:1000494,8.20e-08,10;CL:0000128,9.95e-07,7;CL:0000126,9.95e-07,7;CL:0000127,9.95e-07,7;CL:0002453,9.95e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.49e-07;82 | |ontology_enrichment_development_v019=UBERON:0006601;1.49e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;1.87e-17;34!UBERON:0002020;1.87e-17;34!UBERON:0000073;2.80e-17;53!UBERON:0002616;2.80e-17;53!UBERON:0001893;4.23e-17;34!UBERON:0002791;8.69e-17;32!UBERON:0001869;1.00e-16;32!UBERON:0002780;6.06e-16;41!UBERON:0001890;6.06e-16;41!UBERON:0000956;3.59e-14;25!UBERON:0000203;3.59e-14;25!UBERON:0001017;7.42e-12;75!UBERON:0002619;1.36e-11;22!UBERON:0000955;1.40e-11;68!UBERON:0001016;8.04e-11;83!UBERON:0001950;4.20e-10;20!UBERON:0004732;1.29e-08;13!UBERON:0004733;3.15e-08;12!UBERON:0002028;3.15e-08;12!UBERON:0004211;7.93e-08;10!UBERON:0009773;7.93e-08;10!UBERON:0001231;7.93e-08;10!UBERON:0004810;7.93e-08;10!UBERON:0000125;1.30e-07;9!UBERON:0002308;1.30e-07;9!UBERON:0002420;2.15e-07;9!UBERON:0007245;2.15e-07;9!UBERON:0010009;2.15e-07;9!UBERON:0010011;2.15e-07;9!UBERON:0000454;2.15e-07;9!UBERON:0000489;8.47e-07;29 | |ontology_enrichment_uberon_v019=UBERON:0003528;1.87e-17;34!UBERON:0002020;1.87e-17;34!UBERON:0000073;2.80e-17;53!UBERON:0002616;2.80e-17;53!UBERON:0001893;4.23e-17;34!UBERON:0002791;8.69e-17;32!UBERON:0001869;1.00e-16;32!UBERON:0002780;6.06e-16;41!UBERON:0001890;6.06e-16;41!UBERON:0000956;3.59e-14;25!UBERON:0000203;3.59e-14;25!UBERON:0001017;7.42e-12;75!UBERON:0002619;1.36e-11;22!UBERON:0000955;1.40e-11;68!UBERON:0001016;8.04e-11;83!UBERON:0001950;4.20e-10;20!UBERON:0004732;1.29e-08;13!UBERON:0004733;3.15e-08;12!UBERON:0002028;3.15e-08;12!UBERON:0004211;7.93e-08;10!UBERON:0009773;7.93e-08;10!UBERON:0001231;7.93e-08;10!UBERON:0004810;7.93e-08;10!UBERON:0000125;1.30e-07;9!UBERON:0002308;1.30e-07;9!UBERON:0002420;2.15e-07;9!UBERON:0007245;2.15e-07;9!UBERON:0010009;2.15e-07;9!UBERON:0010011;2.15e-07;9!UBERON:0000454;2.15e-07;9!UBERON:0000489;8.47e-07;29 | ||
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| ||
|short_description=p3@ITGB8 | |short_description=p3@ITGB8 | ||
}} | }} |
Latest revision as of 16:30, 17 September 2015
Short description: | p3@ITGB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ITGB8_5end |
Coexpression cluster: | C1537_clear_endometrial_serous_Neural_Fibroblast_CD14_melanoma |
Association with transcript: | 158bp_to_ENST00000537992, uc011jyh.1_5end |
EntrezGene: | ITGB8 |
HGNC: | 6163 |
UniProt: | B4DHD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 8.20e-08 | 10 |
nephron tubule epithelial cell | 8.20e-08 | 10 |
oligodendrocyte | 9.95e-07 | 7 |
macroglial cell | 9.95e-07 | 7 |
astrocyte | 9.95e-07 | 7 |
oligodendrocyte precursor cell | 9.95e-07 | 7 |