FFCP PHASE1:Hg19::chr12:2162478..2162508,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:2162478..2162508,+ to FFCP PHASE1:Hg19::chr12:2162478..2162508,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=775 | |EntrezGene=775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1390 | |HGNC=1390 | ||
|TSSclassifier=strong | |||
|UniProt=F5H522 | |UniProt=F5H522 | ||
|association_with_transcript=14bp_to_ENST00000335762,ENST00000399655_5end | |||
|cluster_id=chr12:2162478..2162508,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_CACNA1C_5end | |||
|id=chr12:2162478..2162508,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.78e-09!75;CL:0002620!1.21e-07!23 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.17e-12;3!UBERON:0006601;7.92e-09;82!UBERON:0010122;9.71e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.71e-32!57;UBERON:0005068!1.71e-32!57;UBERON:0006241!1.71e-32!57;UBERON:0007135!1.71e-32!57;UBERON:0002616!1.84e-31!59;UBERON:0000955!1.44e-29!69;UBERON:0006238!1.44e-29!69;UBERON:0007023!1.07e-28!115;UBERON:0001017!2.68e-28!82;UBERON:0000073!1.99e-27!94;UBERON:0001016!1.99e-27!94;UBERON:0005743!3.27e-27!86;UBERON:0002020!5.60e-25!34;UBERON:0003528!5.60e-25!34;UBERON:0001893!6.12e-25!34;UBERON:0002780!6.85e-25!41;UBERON:0001890!6.85e-25!41;UBERON:0006240!6.85e-25!41;UBERON:0001869!4.68e-24!32;UBERON:0003080!5.78e-24!42;UBERON:0002791!6.12e-24!33;UBERON:0003075!1.09e-23!86;UBERON:0007284!1.09e-23!86;UBERON:0002346!1.92e-23!90;UBERON:0002619!1.37e-19!22;UBERON:0000153!8.41e-18!129;UBERON:0007811!8.41e-18!129;UBERON:0000033!8.88e-18!123;UBERON:0001950!1.13e-17!20;UBERON:0000956!1.65e-17!25;UBERON:0000203!1.65e-17!25;UBERON:0000924!1.81e-16!173;UBERON:0006601!1.81e-16!173;UBERON:0004121!2.45e-16!169;UBERON:0003056!6.82e-15!61;UBERON:0000475!3.12e-14!365;UBERON:0003076!1.40e-09!15;UBERON:0003057!1.40e-09!15;UBERON:0004733!2.73e-09!12;UBERON:0002028!2.73e-09!12;UBERON:0007277!2.73e-09!12;UBERON:0002420!2.89e-09!9;UBERON:0007245!2.89e-09!9;UBERON:0010009!2.89e-09!9;UBERON:0010011!2.89e-09!9;UBERON:0000454!2.89e-09!9;UBERON:0002308!5.22e-09!9;UBERON:0000125!5.22e-09!9;UBERON:0000062!8.45e-09!511;UBERON:0004732!2.70e-08!13;UBERON:0000468!5.84e-08!659;UBERON:0000200!1.84e-07!6;UBERON:0000064!2.24e-07!219;UBERON:0009663!2.41e-07!7;UBERON:0002680!4.58e-07!9;UBERON:0001895!4.58e-07!9;UBERON:0010092!4.58e-07!9;UBERON:0001871!4.71e-07!7;UBERON:0000467!6.18e-07!625;UBERON:0000480!7.52e-07!626;UBERON:0000025!7.93e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.89e-57;22!UBERON:0001869;2.43e-55;32!UBERON:0002791;4.41e-52;32!UBERON:0001950;4.92e-50;20!UBERON:0003528;6.38e-50;34!UBERON:0002020;6.38e-50;34!UBERON:0000956;8.04e-50;25!UBERON:0000203;8.04e-50;25!UBERON:0001893;1.59e-49;34!UBERON:0002780;9.92e-40;41!UBERON:0001890;9.92e-40;41!UBERON:0000073;1.34e-31;53!UBERON:0002616;1.34e-31;53!UBERON:0000955;1.89e-21;68!UBERON:0002021;1.14e-19;5!UBERON:0001017;3.73e-18;75!UBERON:0001016;1.27e-16;83!UBERON:0000200;1.64e-16;6!UBERON:0000369;3.61e-16;4!UBERON:0002435;3.61e-16;4!UBERON:0000204;3.61e-16;4!UBERON:0000349;4.17e-13;5!UBERON:0001872;8.60e-13;5!UBERON:0005383;1.84e-12;3!UBERON:0005382;1.84e-12;3!UBERON:0001870;4.54e-12;3!UBERON:0002420;5.23e-11;9!UBERON:0007245;5.23e-11;9!UBERON:0010009;5.23e-11;9!UBERON:0010011;5.23e-11;9!UBERON:0000454;5.23e-11;9!UBERON:0000125;1.09e-10;9!UBERON:0002308;1.09e-10;9!UBERON:0002680;1.39e-10;9!UBERON:0001895;1.39e-10;9!UBERON:0001871;2.27e-09;6!UBERON:0009663;2.91e-09;7!UBERON:0011216;4.13e-09;132!UBERON:0001873;9.71e-09;2!UBERON:0001954;9.71e-09;2!UBERON:0002702;9.71e-09;2!UBERON:0003022;9.71e-09;2!UBERON:0002421;9.71e-09;2!UBERON:0002600;9.71e-09;2!UBERON:0007023;1.36e-08;114!UBERON:0004733;7.39e-08;12!UBERON:0002028;7.39e-08;12!UBERON:0004732;3.15e-07;13!UBERON:0010314;3.68e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.71e-63,32;UBERON:0001893,1.65e-59,34;UBERON:0003528,3.40e-59,34;UBERON:0002020,3.40e-59,34;UBERON:0000073,2.12e-58,53;UBERON:0002616,2.12e-58,53;UBERON:0002791,4.77e-58,32;UBERON:0002619,1.61e-57,22;UBERON:0001049,6.31e-55,56;UBERON:0005068,6.31e-55,56;UBERON:0006241,6.31e-55,56;UBERON:0007135,6.31e-55,56;UBERON:0002780,7.89e-53,41;UBERON:0001890,7.89e-53,41;UBERON:0003080,7.89e-53,41;UBERON:0006240,7.89e-53,41;UBERON:0001950,1.09e-50,20;UBERON:0000956,2.58e-50,25;UBERON:0000203,2.58e-50,25;UBERON:0000955,1.01e-46,68;UBERON:0006238,1.01e-46,68;UBERON:0001017,4.16e-41,81;UBERON:0003075,6.90e-38,82;UBERON:0007284,6.90e-38,82;UBERON:0001016,2.64e-36,89;UBERON:0002346,8.65e-36,86;UBERON:0003056,1.06e-33,61;UBERON:0010371,2.49e-28,104;UBERON:0010314,8.73e-28,132;UBERON:0007023,1.09e-25,114;UBERON:0002021,8.98e-20,5;UBERON:0004121,2.72e-19,171;UBERON:0000924,2.72e-19,171;UBERON:0006601,2.72e-19,171;UBERON:0000369,1.34e-16,4;UBERON:0002435,1.34e-16,4;UBERON:0000204,1.34e-16,4;UBERON:0010082,1.34e-16,4;UBERON:0000200,1.91e-16,6;UBERON:0011216,3.45e-16,223;UBERON:0000025,3.81e-14,192;UBERON:0000349,4.33e-13,5;UBERON:0001872,5.55e-13,5;UBERON:0005383,8.96e-13,3;UBERON:0005382,8.96e-13,3;UBERON:0001870,1.81e-12,3;UBERON:0004111,1.63e-11,240;UBERON:0002420,3.10e-11,9;UBERON:0007245,3.10e-11,9;UBERON:0010009,3.10e-11,9;UBERON:0010011,3.10e-11,9;UBERON:0000454,3.10e-11,9;UBERON:0000125,7.51e-11,9;UBERON:0002308,7.51e-11,9;UBERON:0002680,1.86e-10,9;UBERON:0001895,1.86e-10,9;UBERON:0010092,1.86e-10,9;UBERON:0009663,1.68e-09,7;UBERON:0001871,2.33e-09,6;UBERON:0001873,6.47e-09,2;UBERON:0010122,6.47e-09,2;UBERON:0002702,6.73e-09,2;UBERON:0001954,1.30e-08,2;UBERON:0003022,1.30e-08,2;UBERON:0002421,1.30e-08,2;UBERON:0002600,1.30e-08,2;UBERON:0005253,1.35e-08,2;UBERON:0004733,9.15e-08,12;UBERON:0002028,9.15e-08,12;UBERON:0007277,9.15e-08,12;UBERON:0004732,3.83e-07,13 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,1.0007329835313,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861847406537515,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.529636723252875,1.43418310374407,0.354668382198357,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0.413303124703062,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0,1.31693286264251,1.22595118319608,0.45071417671979,0.113432183160021,0.358779271377724,0.427114777637135,0.635795703478686,0.900273288253207,0.515262646192195,1.03056216018252,0.558350568994769,0.675105328965065,0.0974370051611986,2.52433774244115,0.460249493211497,0.323292113637624,0,0.201504196455281,0.169560592310488,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,1.24900292158013,0.157702415033935,0.468565659970853,0,0,0,0,0.368738337083406,0.347534457872331,0,0,0,0,0,0,0,0,0,1.68808170616869,0.280660094433074,0.384417447767103,0,0.160853921143607,0,0.462629081407967,0.177561725313127,0.328508624055237,0.519254429183621,0.232420756919918,0,0.200506470303285,0,0,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0.574265537996172,0,0,0.096670718292122,0,0.460511024178389,0,0.751941714077915,0.145016693914229,0.340906509664404,0,0,0,0,0,0,1.25924938732256,0,0,0,0.869932992075073,0.18532421910392,0,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0,0,0.274537029736055,0.353437207037059,0.202182481573316,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,3.37606599385231,0,0,0,1.79323189425963,0.276283915531148,0.503865495708552,0,0,0.311039587661807,0,0,0,0.591860433821602,0,1.11136990144637,0,0.927680981618513,3.99227596002388,0,0,0,0,0,0,0,0,0.520874984799877,1.77148277162768,2.41192877250816,1.52581736317083,3.64911557773041,2.06883333267483,0.219385397153973,0,0,0.846452843541768,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.471807930864739,0.802577647298789,0.937057782901357,0,0,0,0,0,1.53036380815245,3.1593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,1.96263467463224,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.203996435272644,0,0.600420288709789,0.821432273351958,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,0,2.38568906942791,1.22583065500418,0,0.137539436597234,0,0,0,2.85522916292716,0,0.315222829196793,0.419636705079985,0,0,0,0.714695326373367,0,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0,1.02232813071253,0.566560457600628,0,0,1.16354660725395,0.79339561045614,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.976210119215705,2.3786276834235,0.573409195690071,0.554645257684261,0.993542447062135,0,0,0,0,0,0.936669811613763,0.28984205722165,0.447764408660622,0,0.554805861502613,0.378806010550178,0.50313580350515,0.889811221596536,0,0.453692771289717,0.15543720058278,0,0.318593534327405,0,0.310525913752519,0,0.265841714557995,1.5652351854352,0.150257608997218,0,0,0.181848659202559,0.214821114084977,0,0.796191777397232,0,1.03018711554838,0.673498977531838,0,0,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,2.07387654227596,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.383683113910955,0.754773679776773,0.157265941855896,0.109209638192014,0,0.212574920101683,0,0,0.318004350653419,0,0,1.05802783107205,0,2.89031512934068,1.41696576325585,2.87340946302872,1.64093091392604,2.26864526599546,3.04291910842559,2.58361033010962,0,0,0,0,0,1.1441462864015,0,0.397832444232549,0.225630985047772,0.40341013740704,0,0,0,0,2.29627787702542,0,3.72036233702131,1.71222687523548,1.64092442705466,0,0.496211178389294,0.175871244359621,0,0,0,0.606965604236632,1.59363533945908,0.0887023701626388,0,0,1.2914249265598,2.30204707469972,0,0,0.549451649953598,2.98519620840404,0,1.82631744101899,0,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| ||
|short_description=p4@CACNA1C | |||
}} | }} |
Latest revision as of 19:32, 17 September 2015
Short description: | p4@CACNA1C |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CACNA1C_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 14bp_to_ENST00000335762, ENST00000399655_5end |
EntrezGene: | CACNA1C |
HGNC: | 1390 |
UniProt: | F5H522 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data