FFCP PHASE1:Hg19::chr15:48009541..48009676,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:48009541..48009676,+ to FFCP PHASE1:Hg19::chr15:48009541..48009676,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80031 | |EntrezGene=80031 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16770 | |HGNC=16770 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000536845,ENST00000558816,ENST00000561106,uc010bek.2_5end | |||
|cluster_id=chr15:48009541..48009676,+ | |||
|description=CAGE_peak_1_at_SEMA6D_5end | |||
|id=chr15:48009541..48009676,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.96e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.96e-36!115;UBERON:0005743!1.07e-33!86;UBERON:0001017!5.26e-33!82;UBERON:0000073!8.20e-32!94;UBERON:0001016!8.20e-32!94;UBERON:0001049!1.87e-31!57;UBERON:0005068!1.87e-31!57;UBERON:0006241!1.87e-31!57;UBERON:0007135!1.87e-31!57;UBERON:0002616!7.20e-29!59;UBERON:0000955!1.19e-28!69;UBERON:0006238!1.19e-28!69;UBERON:0002780!1.88e-25!41;UBERON:0001890!1.88e-25!41;UBERON:0006240!1.88e-25!41;UBERON:0003075!5.99e-25!86;UBERON:0007284!5.99e-25!86;UBERON:0002346!6.52e-25!90;UBERON:0000924!2.23e-24!173;UBERON:0006601!2.23e-24!173;UBERON:0000033!2.85e-24!123;UBERON:0003080!3.05e-24!42;UBERON:0004121!4.14e-24!169;UBERON:0000153!5.75e-24!129;UBERON:0007811!5.75e-24!129;UBERON:0001893!3.67e-21!34;UBERON:0002020!4.11e-21!34;UBERON:0003528!4.11e-21!34;UBERON:0002791!1.76e-20!33;UBERON:0001869!7.79e-20!32;UBERON:0000477!1.65e-19!286;UBERON:0003056!4.30e-18!61;UBERON:0004111!1.99e-17!241;UBERON:0002619!4.71e-16!22;UBERON:0000956!3.50e-15!25;UBERON:0000203!3.50e-15!25;UBERON:0000481!3.88e-15!347;UBERON:0000475!4.63e-15!365;UBERON:0001950!9.61e-15!20;UBERON:0000025!4.20e-13!194;UBERON:0000483!4.81e-13!309;UBERON:0000119!9.61e-13!312;UBERON:0000064!5.93e-12!219;UBERON:0000468!1.22e-11!659;UBERON:0000062!2.66e-11!511;UBERON:0000480!1.08e-09!626;UBERON:0000467!1.12e-09!625;UBERON:0000922!1.93e-08!612;UBERON:0003076!2.54e-08!15;UBERON:0003057!2.54e-08!15;UBERON:0002308!1.95e-07!9;UBERON:0000125!1.95e-07!9;UBERON:0002420!2.08e-07!9;UBERON:0007245!2.08e-07!9;UBERON:0010009!2.08e-07!9;UBERON:0010011!2.08e-07!9;UBERON:0000454!2.08e-07!9;UBERON:0002050!2.64e-07!605;UBERON:0005423!2.64e-07!605;UBERON:0000923!4.58e-07!604;UBERON:0005291!4.58e-07!604;UBERON:0006598!4.58e-07!604;UBERON:0002532!4.58e-07!604;UBERON:0004732!5.45e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.40e-22;41!UBERON:0001890;3.40e-22;41!UBERON:0001893;1.12e-21;34!UBERON:0003528;1.24e-21;34!UBERON:0002020;1.24e-21;34!UBERON:0001869;2.03e-21;32!UBERON:0002791;2.53e-21;32!UBERON:0000073;1.45e-20;53!UBERON:0002616;1.45e-20;53!UBERON:0002619;4.39e-20;22!UBERON:0001950;2.07e-18;20!UBERON:0000956;6.46e-18;25!UBERON:0000203;6.46e-18;25!UBERON:0001017;1.67e-14;75!UBERON:0000955;5.87e-14;68!UBERON:0001016;7.82e-13;83!UBERON:0007023;9.10e-12;114!UBERON:0000125;4.50e-09;9!UBERON:0002308;4.50e-09;9!UBERON:0002420;5.02e-09;9!UBERON:0007245;5.02e-09;9!UBERON:0010009;5.02e-09;9!UBERON:0010011;5.02e-09;9!UBERON:0000454;5.02e-09;9!UBERON:0011216;5.07e-08;132!UBERON:0009663;2.22e-07;7!UBERON:0004732;3.09e-07;13!UBERON:0001871;6.29e-07;6!UBERON:0001894;7.67e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.66e-44,114;UBERON:0001049,1.65e-38,56;UBERON:0005068,1.65e-38,56;UBERON:0006241,1.65e-38,56;UBERON:0007135,1.65e-38,56;UBERON:0001017,5.22e-36,81;UBERON:0000073,6.52e-36,53;UBERON:0002616,6.52e-36,53;UBERON:0001016,5.97e-34,89;UBERON:0000955,1.87e-31,68;UBERON:0006238,1.87e-31,68;UBERON:0002780,6.60e-31,41;UBERON:0001890,6.60e-31,41;UBERON:0003080,6.60e-31,41;UBERON:0006240,6.60e-31,41;UBERON:0002346,1.90e-28,86;UBERON:0003075,3.10e-28,82;UBERON:0007284,3.10e-28,82;UBERON:0011216,1.29e-26,223;UBERON:0001893,1.89e-25,34;UBERON:0003528,2.18e-25,34;UBERON:0002020,2.18e-25,34;UBERON:0001869,9.12e-24,32;UBERON:0002791,1.12e-23,32;UBERON:0010371,3.45e-23,104;UBERON:0010314,4.87e-23,132;UBERON:0004121,5.97e-23,171;UBERON:0000924,5.97e-23,171;UBERON:0006601,5.97e-23,171;UBERON:0003056,1.33e-20,61;UBERON:0002619,5.34e-20,22;UBERON:0001950,2.49e-18,20;UBERON:0000956,7.09e-18,25;UBERON:0000203,7.09e-18,25;UBERON:0004111,5.02e-16,240;UBERON:0000025,5.35e-13,192;UBERON:0000483,2.30e-09,306;UBERON:0000125,4.87e-09,9;UBERON:0002308,4.87e-09,9;UBERON:0002420,5.29e-09,9;UBERON:0007245,5.29e-09,9;UBERON:0010009,5.29e-09,9;UBERON:0010011,5.29e-09,9;UBERON:0000454,5.29e-09,9;UBERON:0000119,5.95e-09,309;UBERON:0003076,8.68e-09,15;UBERON:0003057,8.68e-09,15;UBERON:0009663,2.34e-07,7;UBERON:0004732,3.72e-07,13;UBERON:0001871,7.32e-07,6;UBERON:0001894,7.58e-07,7;UBERON:0006222,7.58e-07,7 | |||
|phase1_expression=0,0,0,0,0.893922188854576,0,0,0.631719873426831,0.783556884599516,0.491467873003018,0,0,0,1.60896258848061,2.31978163009541,0,0,0,0,0.369363174230364,0.612002073732759,1.25381888591235,2.57612388417951,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,0.639312809217652,0.722878304769133,2.00535164254356,1.30361867064741,1.5905718941022,0.486634870302636,0.378139268656271,0.443458794925128,0.263504357079378,5.95954793514592,0,0,0,0,0,0,0,0,0.79504962946682,0,0.694281003215189,0,1.25849830862972,0,0.417989933073621,1.55050055501597,1.42306505074684,4.35136796594071,0.402829317109147,0,0.24406205754817,0,1.62028389576352,1.69669483739752,1.34717623575702,3.0405099730497,1.53316637465883,0,0.549605231791222,0,0,0,1.98788780678127,2.40597972162702,1.05927344650575,6.59724227722272,2.4826786753885,1.12135520028461,0,0,1.55605517699883,0.134710672069688,0.490385709340376,0.454072282934794,0.576175924479999,0.468642863667593,0.312160076830321,0,0,0.822041490506354,0.485618833104395,0.140450806702248,3.26646674007829,1.59684612505298,2.37649296704261,3.56400857184616,0.741800787835671,0,0,2.18836948140286,1.87677779807946,3.04770527032601,0,0.919463387397059,0.751190294532984,1.36118619792025,1.25572744982203,2.77624605464138,0.423863802319124,0.900273288253207,0.412210116953756,1.8034837803194,1.67505170698431,1.18143432568886,0.0974370051611986,0.504867548488229,0.552299391853796,3.23292113637624,2.84007674013291,1.71278566986988,1.3564847384839,0.966304265816484,0.545492241181669,1.14721838155602,0.609868530647977,1.06023814657188,1.74290914304278,2.17688215532278,0.252320850875628,1.09493207722749,1.56449532329816,1.28648187638577,2.76269842704961,1.39310378409594,0,0.354920400119532,0,0.482022059766964,0.110293972732394,0,0,0.134831308160164,0,0,0.738155454624648,1.40241773803446,0.4115740113314,1.47008711385542,1.26755034821831,0,2.36315962672562,0,0,0.686271241194102,0.109750285408626,0,0.502644862058154,0.370353780634118,0,0,1.44331342025273,0.463721619900307,0.352226082707465,0.866198686566443,0,1.14152491340759,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0.414656231081544,0.720599767084807,0.25248486685276,6.54028311209341,2.29193055334967,9.37739577680376,5.13217338068116,9.25447434329912,6.9078903304101,12.862189468376,0.224262168690721,0,0.07333828582095,0.258543431515556,0,0,2.92531928243358,0,0,1.41849132023278,0,2.57360388584666,0.542621605391443,0,0,3.19852753868291,0,3.61727252471503,0,1.99945982364114,0,0,0,2.15662369942424,1.14861935834114,0,0.434343920002738,0.205476322550383,0.179060963239896,0,0,0,0,14.229298956458,7.8083912314573,3.09315525111078,3.85287410269002,10.2070200264506,0,0,0,2.57652132610194,1.50051156317903,1.08506009479894,2.07970861530807,1.60586089917446,1.41932173530541,0.117141414992713,0.902838299183157,4.5481500811197,4.1389228517002,0,0.184369168541703,1.30325421702124,0.391602314925481,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0,1.02341449813341,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0,0.0920809889358963,4.01850568576124,1.27463817604702,1.31124414959424,0,0.231046011313244,0,0,0.105551628892876,0,0.510281115829547,0.863663664408557,0,0.270946437543853,0,0,0,0,0,0,1.53870075069834,1.31205858279882,0.325378394664303,4.6368455241475,0.640986253728404,1.23764249880882,0,0,1.6068392984416,0.290012154876366,0.308097234229289,0,0.275673144969061,0.214840489736547,0.145016693914229,0,0.712256285173899,0.165284915360978,0,0,0.2023155617111,0,1.88887408098384,0.6970372701606,2.46426864140871,0.532306030317022,0.869932992075073,0.18532421910392,0.715624433709956,0.372158369359667,3.16379424718726,0.762520775695299,0,1.28381696410176,1.27281299170375,0,0.719489830333259,1.09814811894422,1.06031162111118,1.01091240786658,0,0,0.48763373908959,2.19342140668156,1.05650146756755,4.09499734223957,6.92886616573193,0,1.10273068709225,0,0,1.15755106853338,0.655894752046633,0,0.30982349809975,0,0,0,0,0.354761064070598,0.422215270595328,0.658589785919804,0.75894634753143,0,0.0962221127255121,0.670302275535787,0,3.57746442951761,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0,0.593929361665277,0,27.8361341374563,12.6602474769461,1.8922479853894,0,0.422250816255987,7.96991953004279,6.63081397274754,0,0.920418142519393,0,1.55519793830904,0.0898683511473268,0.179021174675609,0,1.67693789582787,0,0,22.29465316019,20.2234453992836,5.98841394003583,0.520855522170466,0,0,0.1137934482855,0.508507300585533,19.8565652685067,1.72371686620732,0.291604613383254,3.12524990879926,36.3153968183674,11.2154687921629,19.8356257212208,8.18286523491062,8.57088094965288,7.67848890038904,3.0502769785317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| ||
|short_description=p1@SEMA6D | |||
}} | }} |
Latest revision as of 21:30, 17 September 2015
Short description: | p1@SEMA6D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEMA6D_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000536845, ENST00000558816, ENST00000561106, uc010bek.2_5end |
EntrezGene: | SEMA6D |
HGNC: | 16770 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data