FFCP PHASE1:Hg19::chr21:27543366..27543423,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:27543366..27543423,- to FFCP PHASE1:Hg19::chr21:27543366..27543423,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=351 | |EntrezGene=351 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=620 | |HGNC=620 | ||
|TSSclassifier=strong | |||
|UniProt=E9PEV0 | |UniProt=E9PEV0 | ||
|association_with_transcript=22bp_to_ENST00000448388,NM_001136131,uc011aci.1_5end | |||
|cluster_id=chr21:27543366..27543423,- | |||
|description=CAGE_peak_13_at_APP_5end | |||
|id=chr21:27543366..27543423,- | |||
|ontology_enrichment_celltype=CL:0000066!2.42e-12!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.04e-23!86;UBERON:0000073!5.74e-22!94;UBERON:0001016!5.74e-22!94;UBERON:0001017!9.61e-22!82;UBERON:0001049!3.00e-21!57;UBERON:0005068!3.00e-21!57;UBERON:0006241!3.00e-21!57;UBERON:0007135!3.00e-21!57;UBERON:0003075!1.02e-20!86;UBERON:0007284!1.02e-20!86;UBERON:0002346!3.49e-20!90;UBERON:0002616!2.61e-19!59;UBERON:0002780!1.69e-18!41;UBERON:0001890!1.69e-18!41;UBERON:0006240!1.69e-18!41;UBERON:0000955!1.70e-18!69;UBERON:0006238!1.70e-18!69;UBERON:0004121!3.32e-18!169;UBERON:0000033!3.77e-18!123;UBERON:0000924!4.52e-18!173;UBERON:0006601!4.52e-18!173;UBERON:0001869!6.95e-18!32;UBERON:0003056!7.02e-18!61;UBERON:0003080!1.18e-17!42;UBERON:0001893!2.07e-17!34;UBERON:0002020!2.35e-17!34;UBERON:0003528!2.35e-17!34;UBERON:0000153!9.29e-17!129;UBERON:0007811!9.29e-17!129;UBERON:0002791!1.25e-16!33;UBERON:0002619!2.37e-15!22;UBERON:0007023!2.41e-14!115;UBERON:0001950!5.69e-14!20;UBERON:0000922!2.06e-13!612;UBERON:0000956!4.74e-13!25;UBERON:0000203!4.74e-13!25;UBERON:0000468!2.21e-12!659;UBERON:0000480!6.20e-12!626;UBERON:0000467!8.50e-12!625;UBERON:0000923!9.73e-12!604;UBERON:0005291!9.73e-12!604;UBERON:0006598!9.73e-12!604;UBERON:0002532!9.73e-12!604;UBERON:0002050!1.39e-11!605;UBERON:0005423!1.39e-11!605;UBERON:0000483!2.51e-11!309;UBERON:0000119!3.77e-11!312;UBERON:0000062!3.45e-10!511;UBERON:0004111!3.99e-10!241;UBERON:0000477!4.91e-09!286;UBERON:0000025!5.95e-09!194;UBERON:0000064!4.12e-08!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.38e-27;32!UBERON:0001893;5.10e-26;34!UBERON:0003528;8.57e-26;34!UBERON:0002020;8.57e-26;34!UBERON:0002619;9.06e-25;22!UBERON:0002791;1.21e-24;32!UBERON:0002780;9.98e-23;41!UBERON:0001890;9.98e-23;41!UBERON:0001950;5.02e-22;20!UBERON:0000956;3.51e-21;25!UBERON:0000203;3.51e-21;25!UBERON:0000073;1.10e-16;53!UBERON:0002616;1.10e-16;53!UBERON:0000955;4.03e-13;68!UBERON:0000200;2.70e-11;6!UBERON:0001017;3.11e-10;75!UBERON:0002420;6.56e-10;9!UBERON:0007245;6.56e-10;9!UBERON:0010009;6.56e-10;9!UBERON:0010011;6.56e-10;9!UBERON:0000454;6.56e-10;9!UBERON:0000349;2.34e-09;5!UBERON:0000125;2.48e-09;9!UBERON:0002308;2.48e-09;9!UBERON:0001871;6.91e-09;6!UBERON:0000369;1.10e-08;4!UBERON:0002435;1.10e-08;4!UBERON:0000204;1.10e-08;4!UBERON:0001016;1.02e-07;83!UBERON:0009663;5.95e-07;7!UBERON:0005383;6.58e-07;3!UBERON:0005382;6.58e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.31e-31,53;UBERON:0002616,1.31e-31,53;UBERON:0002780,1.67e-31,41;UBERON:0001890,1.67e-31,41;UBERON:0003080,1.67e-31,41;UBERON:0006240,1.67e-31,41;UBERON:0001869,1.81e-29,32;UBERON:0001893,2.16e-29,34;UBERON:0001049,2.55e-29,56;UBERON:0005068,2.55e-29,56;UBERON:0006241,2.55e-29,56;UBERON:0007135,2.55e-29,56;UBERON:0003528,2.76e-29,34;UBERON:0002020,2.76e-29,34;UBERON:0010371,4.55e-29,104;UBERON:0003056,1.21e-28,61;UBERON:0002791,9.20e-27,32;UBERON:0003075,2.75e-25,82;UBERON:0007284,2.75e-25,82;UBERON:0000955,3.94e-25,68;UBERON:0006238,3.94e-25,68;UBERON:0002619,6.95e-25,22;UBERON:0001017,9.51e-25,81;UBERON:0002346,1.64e-23,86;UBERON:0001016,1.65e-23,89;UBERON:0001950,4.95e-22,20;UBERON:0004121,9.68e-22,171;UBERON:0000924,9.68e-22,171;UBERON:0006601,9.68e-22,171;UBERON:0000956,2.79e-21,25;UBERON:0000203,2.79e-21,25;UBERON:0010314,2.40e-16,132;UBERON:0007023,1.26e-13,114;UBERON:0000200,2.90e-11,6;UBERON:0002420,6.67e-10,9;UBERON:0007245,6.67e-10,9;UBERON:0010009,6.67e-10,9;UBERON:0010011,6.67e-10,9;UBERON:0000454,6.67e-10,9;UBERON:0000349,1.69e-09,5;UBERON:0000125,1.97e-09,9;UBERON:0002308,1.97e-09,9;UBERON:0001871,7.26e-09,6;UBERON:0000369,1.11e-08,4;UBERON:0002435,1.11e-08,4;UBERON:0000204,1.11e-08,4;UBERON:0010082,1.11e-08,4;UBERON:0000483,4.31e-08,306;UBERON:0000119,7.40e-08,309;UBERON:0004111,1.64e-07,240;UBERON:0000922,1.85e-07,592;UBERON:0011216,2.23e-07,223;UBERON:0000025,3.90e-07,192;UBERON:0009663,6.09e-07,7;UBERON:0005383,6.71e-07,3;UBERON:0005382,6.71e-07,3;UBERON:0005423,7.88e-07,581 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0.331397375727916,0,0,0,0.975865597581014,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0.383829398097213,0,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,1.29096936716765,0,0,0.272906150057846,0,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0,1.5644487552606,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.175669571386252,1.11332214173056,1.09288586487763,1.11235332835329,0.97364218096405,0.348259474598534,0,0,1.14398982156026,0.74291500265913,0.596287222100115,0,0,0.56530794192401,1.67799774483962,0,0.208994966536811,5.42675194255591,4.62496141492723,2.67776490211736,0.402829317109147,1.52054421143703,0,0.735326160691737,0,0.17859945656816,0.22452937262617,0.450445921933289,0,0.949265659568129,0.366403487860815,0,0,2.18047026071267,0,0,1.19168262731897,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02478218224572,6.00041465299836,3.72845974005705,1.09776335516636,0.662648841607426,1.16193942869518,0.932949495138334,2.01856680700503,0,0,0,0,0,0,0.473227200159376,0.505754070234305,0,0.110293972732394,0.653638332277218,0.237270619111097,0.404493924480493,0.392442930250692,0.38474715694639,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0.686271241194102,9.32877425973317,0,0.301586917234893,1.20364978706088,0,0,1.44331342025273,1.04337364477569,0.352226082707465,0,0.462985512576611,0.761016608938393,0,0,0,0.234004265139238,0.148631162288728,6.56136837907439,7.72717789714754,1.55952606966625,1.70161193135412,3.48760726216754,0.766765358330422,0,0,0.207328115540772,0,0.12624243342638,0.190493682876507,0,0,1.71072446022705,0,0,0,0,0.43596006883328,0,1.68053230485111,0,0,0.797814349754612,2.08014873822732,0,0,0,0,0,0,0,0,0,0.904318131178758,2.61460037580088,0.799783929456456,0,0,2.10833939483032,0,0,1.42636905040718,0.434343920002738,0,0.358121926479791,0,0,0,0,0.76228387266739,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0.695068915744663,0.391602314925481,0,0,0,0,0,0,0,0.496215615637554,0,0,0,0.511707249066704,0.482561763430822,0,0,0,0,1.03850885836724,0,0,8.22076528243468,0.644566922551274,0,0.182091168006717,0.262248829918848,0.902399225814824,4.31285887784723,0,0,3.58875538235777,1.13733384070897,1.53084334748864,0,0,0.270946437543853,0.501689773854853,0.509752546090077,2.49322802678617,0.223874754722178,0,0,1.79515087581472,0.328014645699706,2.27764876265012,0.309123034943167,0,0,4.59412430396938,6.50060246036521,0,0.096670718292122,0,0,0,0,0,0,0,6.28082678371717,2.30628080838127,3.44554323735377,1.71968227454435,0,1.25924938732256,0,0,0,0,0.37064843820784,0,0.372158369359667,0.632758849437452,0.38126038784765,0,0,0.318203247925937,0,0,0.274537029736055,0,0.404364963146632,0,1.68503382495592,0,0.974853958525138,0,0,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0.35667105148125,0.354761064070598,0,0,0,0,1.05844323998063,0,1.08890984861323,0.376575203107117,0.43050537267123,1.68471475667626,1.7737206141467,2.98640420269047,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,0,0.296964680832639,0,8.94732882989668,3.51673541026282,0,0,0,0,0.276283915531148,0,0.613612095012929,0,0.311039587661807,0.179736702294654,0.179021174675609,0,0,0,0,12.6013256992378,6.30823067500589,0,0.520855522170466,0,0,0.227586896570999,0,0,0,0,0.347249989866585,15.0576035588353,7.5975756334007,0,0.442317039724898,1.77328571372128,6.80094731177315,0,0.557694977114413,0.153900517007594,0.683652335082007,0.23056390438806,0,0.325942115766024,0,0.732780747214898,0,0,0,0,0,0,0,0,0,1.05499032264014,0,0,0,0,0.0884575645033392,0,0,0,0,1.14581926067151,0,5.3880822516828,0,0.19566461893209,3.88448607254548,0.394584402849391,1.20990716048664,0.61214552326098,0.568679216656392,0.150323419414493,0.207376382794494,0,0.330991955875499,0,0,0.284609546029793,0.416024019039416,0.173559738335131,0.195984794828755,0.261177619741208,1.04836000945218,0.687944129886466,0.290268993867255,0,0,0,4.05978182780901,0.90392296312213,0.137041924646751,0,8.42033586213187,0,0.240476460754601,0.213452994739353,0.39961921916426,0,0.229073192331831,0,0,0.124252535565433,0.235694034616795,0.407712618220842,0.523014231561666,0,0,2.40168115483916,0.547621515567972,0,0,0,0.279282401272254,0.229160424011684,0,1.39775300349294,0,0.669514372325618,0.201550417460179,0,0,0,0,0,0.295282444544246,0,8.74752658790234,1.63444087333891,1.60753148465019,1.10031549277787,2.9080823662043,0,0,11.1779184250765,0,1.41850273138557,0.577000469484979,0,0.179287339332845,0.383830394638891,0.714695326373367,0.662091970365432,0,1.628998805261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| ||
|short_description=p13@APP | |||
}} | }} |
Latest revision as of 23:23, 17 September 2015
Short description: | p13@APP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_APP_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000448388, NM_001136131, uc011aci.1_5end |
EntrezGene: | APP |
HGNC: | 620 |
UniProt: | E9PEV0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data