FFCP PHASE1:Hg19::chr2:166060552..166060566,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6328 | |EntrezGene=6328 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10590 | |HGNC=10590 | ||
|TSSclassifier=strong | |||
|UniProt=C9JBM7 | |UniProt=C9JBM7 | ||
|association_with_transcript=0bp_to_ENST00000283254,ENST00000453007_5end | |association_with_transcript=0bp_to_ENST00000283254,ENST00000453007_5end | ||
|cluster_id=chr2:166060552..166060566,- | |||
|coexpression_cluster_id=C2665 | |||
|description=CAGE_peak_1_at_SCN3A_5end | |description=CAGE_peak_1_at_SCN3A_5end | ||
|id=chr2:166060552..166060566,- | |id=chr2:166060552..166060566,- | ||
|ontology_enrichment_celltype=CL:0000236!9.10e-09!14 | |ontology_enrichment_celltype=CL:0000236!9.10e-09!14 | ||
|ontology_enrichment_celltype_v019=CL:0000236;5.81e-08;13!CL:1000306;6.24e-07;4!CL:0002547;6.24e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.90e-09,14;CL:1000306,5.58e-07,4;CL:0002547,5.58e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.81e-12;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.94e-47!115;UBERON:0001049!1.79e-44!57;UBERON:0005068!1.79e-44!57;UBERON:0006241!1.79e-44!57;UBERON:0007135!1.79e-44!57;UBERON:0001017!2.18e-44!82;UBERON:0005743!4.48e-42!86;UBERON:0000073!7.09e-41!94;UBERON:0001016!7.09e-41!94;UBERON:0000955!8.04e-39!69;UBERON:0006238!8.04e-39!69;UBERON:0002616!1.19e-37!59;UBERON:0003080!9.42e-35!42;UBERON:0002780!4.55e-34!41;UBERON:0001890!4.55e-34!41;UBERON:0006240!4.55e-34!41;UBERON:0002020!4.97e-31!34;UBERON:0003528!4.97e-31!34;UBERON:0001893!1.59e-30!34;UBERON:0002791!9.58e-30!33;UBERON:0003075!1.23e-29!86;UBERON:0007284!1.23e-29!86;UBERON:0001869!2.69e-29!32;UBERON:0002346!3.08e-29!90;UBERON:0000956!6.35e-23!25;UBERON:0000203!6.35e-23!25;UBERON:0002619!3.51e-22!22;UBERON:0001950!2.83e-20!20;UBERON:0003056!3.22e-20!61;UBERON:0000153!1.56e-18!129;UBERON:0007811!1.56e-18!129;UBERON:0000924!2.16e-18!173;UBERON:0006601!2.16e-18!173;UBERON:0004121!2.86e-18!169;UBERON:0000033!1.58e-17!123;UBERON:0003076!1.15e-10!15;UBERON:0003057!1.15e-10!15;UBERON:0000025!1.36e-10!194;UBERON:0002420!1.20e-09!9;UBERON:0007245!1.20e-09!9;UBERON:0010009!1.20e-09!9;UBERON:0010011!1.20e-09!9;UBERON:0000454!1.20e-09!9;UBERON:0002308!1.68e-09!9;UBERON:0000125!1.68e-09!9;UBERON:0004111!3.51e-09!241;UBERON:0001871!7.81e-09!7;UBERON:0000477!1.97e-08!286;UBERON:0004733!3.04e-08!12;UBERON:0002028!3.04e-08!12;UBERON:0007277!3.04e-08!12;UBERON:0009663!1.04e-07!7;UBERON:0002298!1.43e-07!8;UBERON:0000064!1.43e-07!219;UBERON:0004732!2.46e-07!13;UBERON:0000200!5.72e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.50e-41;34!UBERON:0002020;4.50e-41;34!UBERON:0001869;9.23e-41;32!UBERON:0002791;1.12e-40;32!UBERON:0001893;2.82e-40;34!UBERON:0002780;1.60e-37;41!UBERON:0001890;1.60e-37;41!UBERON:0002619;5.03e-37;22!UBERON:0000073;7.17e-35;53!UBERON:0002616;7.17e-35;53!UBERON:0000956;1.97e-34;25!UBERON:0000203;1.97e-34;25!UBERON:0001950;1.03e-33;20!UBERON:0001017;3.59e-23;75!UBERON:0000955;4.70e-22;68!UBERON:0001016;2.97e-21;83!UBERON:0002420;1.51e-15;9!UBERON:0007245;1.51e-15;9!UBERON:0010009;1.51e-15;9!UBERON:0010011;1.51e-15;9!UBERON:0000454;1.51e-15;9!UBERON:0000125;2.60e-15;9!UBERON:0002308;2.60e-15;9!UBERON:0001871;2.23e-12;6!UBERON:0009663;3.07e-12;7!UBERON:0000200;6.75e-11;6!UBERON:0004733;7.70e-10;12!UBERON:0002028;7.70e-10;12!UBERON:0000349;8.98e-10;5!UBERON:0002298;1.11e-09;6!UBERON:0007023;3.10e-09;114!UBERON:0001872;3.20e-09;5!UBERON:0002021;4.77e-09;5!UBERON:0004732;6.28e-09;13!UBERON:0000369;2.63e-08;4!UBERON:0002435;2.63e-08;4!UBERON:0000204;2.63e-08;4!UBERON:0011216;3.39e-08;132!UBERON:0004797;6.24e-07;4!UBERON:0000415;6.24e-07;4!UBERON:0007240;6.24e-07;4!UBERON:0005742;6.24e-07;4!UBERON:0005734;6.24e-07;4!UBERON:0004664;6.24e-07;4!UBERON:0004663;6.24e-07;4!UBERON:0005383;9.16e-07;3!UBERON:0005382;9.16e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.72e-65,56;UBERON:0005068,5.72e-65,56;UBERON:0006241,5.72e-65,56;UBERON:0007135,5.72e-65,56;UBERON:0000073,1.92e-60,53;UBERON:0002616,1.92e-60,53;UBERON:0001017,1.14e-58,81;UBERON:0001016,4.72e-57,89;UBERON:0002780,6.29e-52,41;UBERON:0001890,6.29e-52,41;UBERON:0003080,6.29e-52,41;UBERON:0006240,6.29e-52,41;UBERON:0000955,8.65e-50,68;UBERON:0006238,8.65e-50,68;UBERON:0003528,2.06e-48,34;UBERON:0002020,2.06e-48,34;UBERON:0001893,1.43e-47,34;UBERON:0001869,2.02e-45,32;UBERON:0002791,3.15e-45,32;UBERON:0003075,4.13e-41,82;UBERON:0007284,4.13e-41,82;UBERON:0002346,5.18e-40,86;UBERON:0002619,3.93e-37,22;UBERON:0000956,1.81e-34,25;UBERON:0000203,1.81e-34,25;UBERON:0001950,7.86e-34,20;UBERON:0003056,5.78e-31,61;UBERON:0010371,1.90e-30,104;UBERON:0007023,4.70e-27,114;UBERON:0004121,7.48e-25,171;UBERON:0000924,7.48e-25,171;UBERON:0006601,7.48e-25,171;UBERON:0011216,2.98e-22,223;UBERON:0010314,8.76e-22,132;UBERON:0002420,1.78e-15,9;UBERON:0007245,1.78e-15,9;UBERON:0010009,1.78e-15,9;UBERON:0010011,1.78e-15,9;UBERON:0000454,1.78e-15,9;UBERON:0000025,2.30e-15,192;UBERON:0000125,3.17e-15,9;UBERON:0002308,3.17e-15,9;UBERON:0003076,7.13e-14,15;UBERON:0003057,7.13e-14,15;UBERON:0001871,2.25e-12,6;UBERON:0009663,3.74e-12,7;UBERON:0000200,7.00e-11,6;UBERON:0004111,3.55e-10,240;UBERON:0004733,6.61e-10,12;UBERON:0002028,6.61e-10,12;UBERON:0007277,6.61e-10,12;UBERON:0000349,9.00e-10,5;UBERON:0002298,1.04e-09,6;UBERON:0001872,2.88e-09,5;UBERON:0002021,3.84e-09,5;UBERON:0004732,5.47e-09,13;UBERON:0000369,2.66e-08,4;UBERON:0002435,2.66e-08,4;UBERON:0000204,2.66e-08,4;UBERON:0010082,2.66e-08,4;UBERON:0000415,5.58e-07,4;UBERON:0007240,5.58e-07,4;UBERON:0005742,5.58e-07,4;UBERON:0005734,5.58e-07,4;UBERON:0004664,5.58e-07,4;UBERON:0004663,5.58e-07,4;UBERON:0005383,9.18e-07,3;UBERON:0005382,9.18e-07,3 | |||
|phase1_expression=0,0,0,2.00146596706261,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0.816002764977012,0,1.14494394852423,0.410623275218653,0.125542639594803,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,2.73069305631066,2.66852776159066,1.28019066769952,0.800791974072025,1.14950487990897,1.32208974556972,0.954053754535364,12.5226853204079,9.39579502993502,5.73409842187843,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,6.58478660655815,1.72131935057184,22.6600930391563,3.54668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,3.23292113637624,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0.932949495138334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,4.31960861178188,22.1237751557957,6.95959931499926,10.2184921853953,10.2070200264506,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,3.98535359121262,0,0,0,0,1.03384013061444,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,3.58195074346692,0,0,0,0,0.0821271560138091,0.519254429183621,0,0.241718899183244,0,0,0,0,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,4.7221852024596,0,0,0.532306030317022,0,0.37064843820784,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97967604735198,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.476463550915578,0,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,6.13150477914872,0,0.284567373393656,1.4348364545594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,1.78178808499583,0,14.9122147164945,25.1798255374818,0,0,0,0.996239941255349,0.552567831062295,0.251932747854276,0,0,0,0,0,0,1.08507746200627,0,5.55684950723184,5.81599647657131,6.30823067500589,11.9768278800717,0,0,2.17499872630438,0,0,0,2.41320361269025,0,5.20874984799877,16.8290863304629,30.2697060949774,4.5774520895125,26.6496016434251,2.95547618953547,1.97446857438575,0,0.975966209950223,0.230850775511391,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0.995261931078505,0.442287822516696,0.611030144933625,0.296521128680622,0.617819694732514,0.417687798021821,1.28062152663286,0,5.3880822516828,0.547364367646998,0,0,0,2.41981432097328,39.1773134887027,0.63186579628488,1.35291077473043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581934098930517,0.353024506766001,1.58186518546373,0.137041924646751,0,8.23040347426423,0.195551382734803,0,0.426905989478705,0,0,0,6.86379991447858,0,0,0,0,0.104602846312333,0.509991088181609,0.288950589901519,6.00420288709789,6.57145818681567,0,0,0.525774708558629,2.51354161145029,0.687481272035051,0,0,0.858452096273142,0,0.470284307407084,1.44119953416961,0,0,0,0,0,2.54019996197353,14.3141344165675,16.6168155456122,0,0,0,0,0,7.22919724230494,0,0.315222829196793,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,7.49841146896993,14.6778187934386,0,0,0,0.471612915298998,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,13.2910226995048,14.1550467286277,26.4152863790715,1.72022758707021,5.76831067991632,5.71286907060728,0.276697269872462,0.37494122388632,0,0.285465333544967,0,0,3.76794674388145,0.149254802886874,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0.336749488765919,0,0.770479321629213,0,0,0,2.77826969188601,0.734210113519403,0,0,0.219284049578707,0,0,0,0,0,0,24.0569678904012,0,0,0,0,0,0,1.19992437512958,0,0.516644938982447,2.27006381426734,9.0211915623402,0,2.48830904013189,4.09261988171685,0.646948868380091,0,4.91443371864063,0,0.212574920101683,0,0,1.59002175326709,0,6.40456598628376,0,52.9804675821036,9.31323763898663,8.5017945795351,21.8698386908297,8.2046545696302,57.4723467385517,1.9364030689981,14.3713324612347,0,0,0,0,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0,0,4.59255575405084,8.59185908475232,22.7355476151302,4.81960157473692,44.3049595304758,0,0,1.05522746615772,0,0,0.672567444437648,7.89055285507621,12.976744907024,0,1.84374380089247,0,4.01021424563307,5.72223129996787,0,0.222462803784138,0.39246546425257,35.0367765512684,2.24217730651031,2.73947616152849,1.51149313853035,0,0.214429632529969,0,9.6480383055544,0,0,0,0.17071847709395,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0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| ||
|short_description=p1@SCN3A | |short_description=p1@SCN3A | ||
}} | }} |
Latest revision as of 23:32, 17 September 2015
Short description: | p1@SCN3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCN3A_5end |
Coexpression cluster: | C2665_occipital_parietal_normal_temporal_duodenum_somatostatinoma_putamen |
Association with transcript: | 0bp_to_ENST00000283254, ENST00000453007_5end |
EntrezGene: | SCN3A |
HGNC: | 10590 |
UniProt: | C9JBM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 5.90e-09 | 14 |
fibroblast of tunica adventitia of artery | 5.58e-07 | 4 |
fibroblast of the aortic adventitia | 5.58e-07 | 4 |