FFCP PHASE1:Hg19::chr15:52043722..52043735,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=256586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28571 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=46bp_to_ENST00000454181_5end | |||
|cluster_id=chr15:52043722..52043735,- | |||
|coexpression_cluster_id=C376 | |||
|description=CAGE_peak_7_at_LYSMD2_5end | |||
|id=chr15:52043722..52043735,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.48e-12;82 | |||
|ontology_enrichment_disease=DOID:5409!5.89e-07!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.78e-51!57;UBERON:0005068!9.78e-51!57;UBERON:0006241!9.78e-51!57;UBERON:0007135!9.78e-51!57;UBERON:0000955!1.30e-41!69;UBERON:0006238!1.30e-41!69;UBERON:0002616!3.98e-41!59;UBERON:0002020!3.99e-41!34;UBERON:0003528!3.99e-41!34;UBERON:0001893!4.99e-41!34;UBERON:0001017!7.47e-41!82;UBERON:0002780!7.69e-41!41;UBERON:0001890!7.69e-41!41;UBERON:0006240!7.69e-41!41;UBERON:0001869!8.92e-41!32;UBERON:0005743!3.25e-40!86;UBERON:0000073!5.81e-40!94;UBERON:0001016!5.81e-40!94;UBERON:0003080!1.20e-39!42;UBERON:0002791!3.88e-39!33;UBERON:0002619!7.63e-37!22;UBERON:0003075!1.83e-36!86;UBERON:0007284!1.83e-36!86;UBERON:0002346!3.11e-34!90;UBERON:0001950!4.06e-33!20;UBERON:0007023!1.05e-32!115;UBERON:0000956!8.75e-32!25;UBERON:0000203!8.75e-32!25;UBERON:0003056!4.72e-28!61;UBERON:0000033!2.12e-21!123;UBERON:0000153!8.36e-20!129;UBERON:0007811!8.36e-20!129;UBERON:0004121!8.83e-19!169;UBERON:0000924!5.18e-18!173;UBERON:0006601!5.18e-18!173;UBERON:0000200!3.19e-13!6;UBERON:0001871!9.41e-13!7;UBERON:0000025!3.56e-12!194;UBERON:0003076!6.30e-12!15;UBERON:0003057!6.30e-12!15;UBERON:0000349!5.20e-11!5;UBERON:0002021!5.31e-11!5;UBERON:0002420!1.06e-10!9;UBERON:0007245!1.06e-10!9;UBERON:0010009!1.06e-10!9;UBERON:0010011!1.06e-10!9;UBERON:0000454!1.06e-10!9;UBERON:0002308!1.13e-10!9;UBERON:0000125!1.13e-10!9;UBERON:0000064!1.31e-08!219;UBERON:0004111!6.00e-08!241;UBERON:0004733!8.60e-08!12;UBERON:0002028!8.60e-08!12;UBERON:0007277!8.60e-08!12;UBERON:0000988!1.83e-07!3;UBERON:0002771!2.82e-07!3;UBERON:0001872!2.86e-07!5;UBERON:0009663!3.24e-07!7;UBERON:0004732!4.31e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.24e-70;22!UBERON:0001950;5.72e-66;20!UBERON:0001869;2.37e-65;32!UBERON:0000956;2.77e-62;25!UBERON:0000203;2.77e-62;25!UBERON:0001893;4.05e-60;34!UBERON:0003528;5.52e-60;34!UBERON:0002020;5.52e-60;34!UBERON:0002791;2.25e-58;32!UBERON:0002780;4.28e-44;41!UBERON:0001890;4.28e-44;41!UBERON:0000200;3.16e-41;6!UBERON:0001870;2.11e-30;3!UBERON:0000073;4.35e-28;53!UBERON:0002616;4.35e-28;53!UBERON:0000955;1.24e-25;68!UBERON:0002702;7.01e-21;2!UBERON:0001017;7.82e-19;75!UBERON:0001872;1.61e-18;5!UBERON:0002021;1.61e-18;5!UBERON:0000988;2.95e-14;3!UBERON:0001016;5.20e-14;83!UBERON:0001871;2.10e-13;6!UBERON:0002581;2.54e-11;1!UBERON:0002902;2.54e-11;1!UBERON:0009899;2.54e-11;1!UBERON:0007190;2.54e-11;1!UBERON:0002420;1.50e-10;9!UBERON:0000125;1.50e-10;9!UBERON:0007245;1.50e-10;9!UBERON:0002308;1.50e-10;9!UBERON:0010009;1.50e-10;9!UBERON:0010011;1.50e-10;9!UBERON:0000454;1.50e-10;9!UBERON:0000349;6.43e-09;5!UBERON:0002298;1.42e-07;6!UBERON:0007023;6.06e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.21e-74,32;UBERON:0002619,2.58e-70,22;UBERON:0003528,6.40e-70,34;UBERON:0002020,6.40e-70,34;UBERON:0001893,7.35e-70,34;UBERON:0001950,1.46e-65,20;UBERON:0002791,3.97e-65,32;UBERON:0000956,5.29e-62,25;UBERON:0000203,5.29e-62,25;UBERON:0002780,7.29e-58,41;UBERON:0001890,7.29e-58,41;UBERON:0003080,7.29e-58,41;UBERON:0006240,7.29e-58,41;UBERON:0000073,7.79e-57,53;UBERON:0002616,7.79e-57,53;UBERON:0001049,1.01e-53,56;UBERON:0005068,1.01e-53,56;UBERON:0006241,1.01e-53,56;UBERON:0007135,1.01e-53,56;UBERON:0000955,1.29e-48,68;UBERON:0006238,1.29e-48,68;UBERON:0000200,2.82e-41,6;UBERON:0001017,1.26e-40,81;UBERON:0003056,1.71e-38,61;UBERON:0001016,2.04e-36,89;UBERON:0003075,3.71e-36,82;UBERON:0007284,3.71e-36,82;UBERON:0002346,2.20e-34,86;UBERON:0001870,5.44e-31,3;UBERON:0010371,4.51e-28,104;UBERON:0007023,1.20e-22,114;UBERON:0010314,1.23e-21,132;UBERON:0002702,2.08e-21,2;UBERON:0002021,2.68e-18,5;UBERON:0001872,4.58e-18,5;UBERON:0004121,4.66e-18,171;UBERON:0000924,4.66e-18,171;UBERON:0006601,4.66e-18,171;UBERON:0000988,2.42e-14,3;UBERON:0000025,4.17e-14,192;UBERON:0001871,2.44e-13,6;UBERON:0011216,3.22e-13,223;UBERON:0002581,2.96e-11,1;UBERON:0007190,3.28e-11,1;UBERON:0002902,3.63e-11,1;UBERON:0009899,3.63e-11,1;UBERON:0002420,7.64e-11,9;UBERON:0007245,7.64e-11,9;UBERON:0010009,7.64e-11,9;UBERON:0010011,7.64e-11,9;UBERON:0000454,7.64e-11,9;UBERON:0004111,9.19e-11,240;UBERON:0000125,9.96e-11,9;UBERON:0002308,9.96e-11,9;UBERON:0000349,3.98e-09,5;UBERON:0000483,7.46e-08,306;UBERON:0000119,9.47e-08,309;UBERON:0002298,1.29e-07,6;UBERON:0009663,9.38e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.154934401160603,0.426507697462265,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.703347082052564,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0.969332746095218,0.463840490809256,5.98841394003583,0,0,0,0.1137934482855,0,0,2.06846023944879,0,0,0,1.68835014075571,0,0.995213339381022,0.295547618953547,0.658156191461918,0,0.139423744278603,0.153900517007594,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0.606610196826093,0,0.702793337176017,0,0.19566461893209,0,0,0,0.61214552326098,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,1.45614830698521,0,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0,0,1.80126086612937,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,0.544813624446302,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,1.45455861916959,0,0,0,0,0,0,0,0.365377795142688,0.638341257770182,0,0,0,0,0.157054096250234,1.77213635993397,0.488105059607853,1.752673029891,0,0.665574309221114,0.558867626472451,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.706521476061055,1.41696576325585,0.478901577171454,1.23069818544453,0.756215088665154,1.24483054435592,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35075169236789,0,1.03343398250592,1.07806877329642,0.546974809018219,0,0,0,0,0,0,0,0,0,0.460935950223117,0,1.56330385846713,1.38122824481983,0,0,0,0.157115589916002,0,0,0,0,0.285906176706625,0.47404083519818,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0.118920090777569,0.11294608203896,0.109940516745429,0.301925687133347,0,0,0.940634592723046,0,0.471353094203252,0.588925401344836,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,1.15585533324555,0.436350690340377,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0.829169439458779,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0.665756774185513,0,0.320568492303233 | |||
|short_description=p7@LYSMD2 | |||
}} |
Latest revision as of 01:20, 18 September 2015
Short description: | p7@LYSMD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LYSMD2_5end |
Coexpression cluster: | C376_brain_temporal_insula_frontal_occipital_postcentral_paracentral |
Association with transcript: | 46bp_to_ENST00000454181_5end |
EntrezGene: | LYSMD2 |
HGNC: | 28571 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data