FFCP PHASE1:Hg19::chr13:78271815..78271834,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122060 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26387 | |||
|TSSclassifier=strong | |||
|UniProt=Q7L0J2 | |||
|association_with_transcript=-154bp_to_NM_001242868_5end | |||
|cluster_id=chr13:78271815..78271834,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_SLAIN1_5end | |||
|id=chr13:78271815..78271834,+ | |||
|ontology_enrichment_celltype=CL:0000542!9.01e-17!53;CL:0000051!9.01e-17!53;CL:0000838!2.04e-16!52;CL:0000084!1.52e-09!25;CL:0000827!1.52e-09!25;CL:0000945!1.83e-07!24;CL:0000826!1.83e-07!24;CL:0000791!3.15e-07!18;CL:0000789!3.15e-07!18;CL:0002420!3.15e-07!18;CL:0002419!3.15e-07!18;CL:0000790!3.15e-07!18;CL:0002087!5.16e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.70e-11;53!CL:0000084;4.76e-11;25!CL:0000945;7.03e-09;24!CL:0000791;2.30e-08;18!CL:0000789;2.30e-08;18!CL:0002419;2.30e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.07e-20,53;CL:0000051,4.07e-20,53;CL:0000838,1.09e-19,52;CL:0000084,3.46e-11,25;CL:0000827,3.46e-11,25;CL:0000945,7.03e-09,24;CL:0000826,7.03e-09,24;CL:0000791,2.12e-08,18;CL:0000789,2.12e-08,18;CL:0002420,2.12e-08,18;CL:0002419,2.12e-08,18;CL:0000790,2.12e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000051;1.70e-11;53!UBERON:0006601;9.44e-10;82!CL:0000790;2.30e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.23e-37!115;UBERON:0000073!2.28e-33!94;UBERON:0001016!2.28e-33!94;UBERON:0001049!1.08e-32!57;UBERON:0005068!1.08e-32!57;UBERON:0006241!1.08e-32!57;UBERON:0007135!1.08e-32!57;UBERON:0005743!1.50e-32!86;UBERON:0001017!2.90e-31!82;UBERON:0002346!3.38e-26!90;UBERON:0002780!6.56e-26!41;UBERON:0001890!6.56e-26!41;UBERON:0006240!6.56e-26!41;UBERON:0003080!1.37e-25!42;UBERON:0002616!4.22e-25!59;UBERON:0003075!2.61e-24!86;UBERON:0007284!2.61e-24!86;UBERON:0000955!3.21e-24!69;UBERON:0006238!3.21e-24!69;UBERON:0002020!1.93e-23!34;UBERON:0003528!1.93e-23!34;UBERON:0001893!1.93e-23!34;UBERON:0002791!9.83e-23!33;UBERON:0001869!6.36e-22!32;UBERON:0003056!5.56e-20!61;UBERON:0000956!3.26e-17!25;UBERON:0000203!3.26e-17!25;UBERON:0002619!1.10e-15!22;UBERON:0001950!2.25e-14!20;UBERON:0000924!4.55e-12!173;UBERON:0006601!4.55e-12!173;UBERON:0000153!2.09e-11!129;UBERON:0007811!2.09e-11!129;UBERON:0004121!7.47e-11!169;UBERON:0000033!5.82e-10!123;UBERON:0003076!3.13e-08!15;UBERON:0003057!3.13e-08!15;UBERON:0002308!1.09e-07!9;UBERON:0000125!1.09e-07!9;UBERON:0002420!1.64e-07!9;UBERON:0007245!1.64e-07!9;UBERON:0010009!1.64e-07!9;UBERON:0010011!1.64e-07!9;UBERON:0000454!1.64e-07!9;UBERON:0004732!6.24e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.90e-24;34!UBERON:0003528;5.16e-24;34!UBERON:0002020;5.16e-24;34!UBERON:0002791;8.00e-24;32!UBERON:0001869;9.06e-24;32!UBERON:0002780;7.36e-22;41!UBERON:0001890;7.36e-22;41!UBERON:0000073;5.02e-21;53!UBERON:0002616;5.02e-21;53!UBERON:0000956;1.72e-20;25!UBERON:0000203;1.72e-20;25!UBERON:0002619;1.21e-18;22!UBERON:0001950;4.67e-17;20!UBERON:0001017;1.02e-14;75!UBERON:0001016;2.27e-14;83!UBERON:0000955;5.31e-14;68!UBERON:0007023;3.37e-10;114!UBERON:0000125;5.78e-09;9!UBERON:0002308;5.78e-09;9!UBERON:0002420;9.52e-09;9!UBERON:0007245;9.52e-09;9!UBERON:0010009;9.52e-09;9!UBERON:0010011;9.52e-09;9!UBERON:0000454;9.52e-09;9!UBERON:0004732;3.29e-08;13!UBERON:0004733;2.23e-07;12!UBERON:0002028;2.23e-07;12!UBERON:0009663;3.05e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.31e-40,89;UBERON:0001017,4.61e-39,81;UBERON:0001049,4.98e-39,56;UBERON:0005068,4.98e-39,56;UBERON:0006241,4.98e-39,56;UBERON:0007135,4.98e-39,56;UBERON:0000073,2.18e-36,53;UBERON:0002616,2.18e-36,53;UBERON:0007023,6.40e-35,114;UBERON:0002346,2.19e-31,86;UBERON:0000955,1.88e-30,68;UBERON:0006238,1.88e-30,68;UBERON:0002780,3.51e-30,41;UBERON:0001890,3.51e-30,41;UBERON:0003080,3.51e-30,41;UBERON:0006240,3.51e-30,41;UBERON:0003075,4.29e-29,82;UBERON:0007284,4.29e-29,82;UBERON:0003528,5.87e-28,34;UBERON:0002020,5.87e-28,34;UBERON:0001893,5.87e-28,34;UBERON:0002791,3.44e-26,32;UBERON:0001869,4.00e-26,32;UBERON:0003056,4.23e-24,61;UBERON:0000956,1.95e-20,25;UBERON:0000203,1.95e-20,25;UBERON:0010371,5.02e-20,104;UBERON:0002619,1.35e-18,22;UBERON:0001950,5.20e-17,20;UBERON:0004121,5.69e-17,171;UBERON:0000924,5.69e-17,171;UBERON:0006601,5.69e-17,171;UBERON:0011216,1.76e-14,223;UBERON:0010314,3.71e-11,132;UBERON:0003076,7.24e-10,15;UBERON:0003057,7.24e-10,15;UBERON:0000125,5.95e-09,9;UBERON:0002308,5.95e-09,9;UBERON:0002420,9.70e-09,9;UBERON:0007245,9.70e-09,9;UBERON:0010009,9.70e-09,9;UBERON:0010011,9.70e-09,9;UBERON:0000454,9.70e-09,9;UBERON:0004732,2.70e-08,13;UBERON:0004733,1.84e-07,12;UBERON:0002028,1.84e-07,12;UBERON:0007277,1.84e-07,12;UBERON:0009663,3.12e-07,7 | |||
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| |||
|short_description=p1@SLAIN1 | |||
}} |
Latest revision as of 01:35, 18 September 2015
Short description: | p1@SLAIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLAIN1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -154bp_to_NM_001242868_5end |
EntrezGene: | SLAIN1 |
HGNC: | 26387 |
UniProt: | Q7L0J2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.07e-20 | 53 |
common lymphoid progenitor | 4.07e-20 | 53 |
lymphoid lineage restricted progenitor cell | 1.09e-19 | 52 |
T cell | 3.46e-11 | 25 |
pro-T cell | 3.46e-11 | 25 |
lymphocyte of B lineage | 7.03e-09 | 24 |
pro-B cell | 7.03e-09 | 24 |
mature alpha-beta T cell | 2.12e-08 | 18 |
alpha-beta T cell | 2.12e-08 | 18 |
immature T cell | 2.12e-08 | 18 |
mature T cell | 2.12e-08 | 18 |
immature alpha-beta T cell | 2.12e-08 | 18 |