FFCP PHASE1:Hg19::chr2:175711978..175712015,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:175711978..175712015,-
|short_description=p2@CHN1
|description=CAGE_peak_2_at_CHN1_5end
|association_with_transcript=-52bp_to_ENST00000444573_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1123 | |EntrezGene=1123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1943 | |HGNC=1943 | ||
|TSSclassifier=strong | |||
|UniProt=C9J1N1 | |UniProt=C9J1N1 | ||
|association_with_transcript=-52bp_to_ENST00000444573_5end | |||
|cluster_id=chr2:175711978..175712015,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_CHN1_5end | |||
|id=chr2:175711978..175712015,- | |||
|ontology_enrichment_celltype=CL:0000055!9.29e-17!180;CL:0000057!1.56e-12!75;CL:0002620!7.21e-10!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.35e-13;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.12e-13,76;CL:0002620,3.95e-13,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!3.14e-29!59;UBERON:0000955!3.99e-29!69;UBERON:0006238!3.99e-29!69;UBERON:0001049!1.23e-27!57;UBERON:0005068!1.23e-27!57;UBERON:0006241!1.23e-27!57;UBERON:0007135!1.23e-27!57;UBERON:0001017!2.99e-27!82;UBERON:0005743!1.12e-26!86;UBERON:0000073!3.02e-26!94;UBERON:0001016!3.02e-26!94;UBERON:0000033!3.63e-22!123;UBERON:0003075!4.20e-22!86;UBERON:0007284!4.20e-22!86;UBERON:0002780!8.16e-22!41;UBERON:0001890!8.16e-22!41;UBERON:0006240!8.16e-22!41;UBERON:0000153!2.02e-21!129;UBERON:0007811!2.02e-21!129;UBERON:0003080!8.65e-21!42;UBERON:0002346!3.36e-20!90;UBERON:0001893!2.72e-19!34;UBERON:0002020!3.91e-19!34;UBERON:0003528!3.91e-19!34;UBERON:0001869!8.20e-19!32;UBERON:0002791!1.52e-18!33;UBERON:0004121!1.73e-18!169;UBERON:0003056!1.88e-17!61;UBERON:0000924!2.01e-17!173;UBERON:0006601!2.01e-17!173;UBERON:0000475!2.12e-17!365;UBERON:0007023!9.26e-17!115;UBERON:0000956!5.22e-14!25;UBERON:0000203!5.22e-14!25;UBERON:0002619!9.65e-14!22;UBERON:0001950!2.28e-12!20;UBERON:0000914!2.36e-08!83;UBERON:0002329!2.36e-08!83;UBERON:0003077!2.36e-08!83;UBERON:0003059!2.36e-08!83;UBERON:0007282!2.36e-08!83;UBERON:0009618!2.36e-08!83;UBERON:0007285!2.36e-08!83;UBERON:0002199!4.41e-08!45;UBERON:0002416!4.41e-08!45;UBERON:0003076!5.44e-08!15;UBERON:0003057!5.44e-08!15;UBERON:0000481!3.36e-07!347;UBERON:0004732!4.23e-07!13;UBERON:0002420!5.03e-07!9;UBERON:0007245!5.03e-07!9;UBERON:0010009!5.03e-07!9;UBERON:0010011!5.03e-07!9;UBERON:0000454!5.03e-07!9;UBERON:0004733!5.80e-07!12;UBERON:0002028!5.80e-07!12;UBERON:0007277!5.80e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.87e-19;32!UBERON:0001893;2.04e-18;34!UBERON:0003528;6.95e-18;34!UBERON:0002020;6.95e-18;34!UBERON:0002791;2.30e-17;32!UBERON:0002780;1.71e-16;41!UBERON:0001890;1.71e-16;41!UBERON:0000073;2.17e-16;53!UBERON:0002616;2.17e-16;53!UBERON:0002619;2.18e-16;22!UBERON:0000956;7.43e-15;25!UBERON:0000203;7.43e-15;25!UBERON:0001950;1.38e-14;20!UBERON:0001017;2.33e-14;75!UBERON:0000955;5.46e-13;68!UBERON:0001016;2.13e-10;83!UBERON:0004732;9.86e-08;13!UBERON:0011216;9.92e-08;132!UBERON:0002420;1.29e-07;9!UBERON:0007245;1.29e-07;9!UBERON:0010009;1.29e-07;9!UBERON:0010011;1.29e-07;9!UBERON:0000454;1.29e-07;9!UBERON:0000200;1.38e-07;6!UBERON:0004733;1.57e-07;12!UBERON:0002028;1.57e-07;12!UBERON:0002199;3.99e-07;46!UBERON:0002416;3.99e-07;46!UBERON:0000125;4.36e-07;9!UBERON:0002308;4.36e-07;9!UBERON:0002097;7.22e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.33e-31,56;UBERON:0005068,4.33e-31,56;UBERON:0006241,4.33e-31,56;UBERON:0007135,4.33e-31,56;UBERON:0000955,2.39e-30,68;UBERON:0006238,2.39e-30,68;UBERON:0000073,1.35e-29,53;UBERON:0002616,1.35e-29,53;UBERON:0001017,9.13e-28,81;UBERON:0001016,1.22e-26,89;UBERON:0003075,4.39e-25,82;UBERON:0007284,4.39e-25,82;UBERON:0002780,4.10e-23,41;UBERON:0001890,4.10e-23,41;UBERON:0003080,4.10e-23,41;UBERON:0006240,4.10e-23,41;UBERON:0002346,6.99e-23,86;UBERON:0010314,1.57e-22,132;UBERON:0001869,5.78e-21,32;UBERON:0001893,1.28e-20,34;UBERON:0003528,1.98e-20,34;UBERON:0002020,1.98e-20,34;UBERON:0010371,7.76e-20,104;UBERON:0003056,8.85e-20,61;UBERON:0004121,9.81e-20,171;UBERON:0000924,9.81e-20,171;UBERON:0006601,9.81e-20,171;UBERON:0002791,4.94e-19,32;UBERON:0002619,2.58e-16,22;UBERON:0000956,8.69e-15,25;UBERON:0000203,8.69e-15,25;UBERON:0001950,1.62e-14,20;UBERON:0011216,4.93e-11,223;UBERON:0007023,1.03e-10,114;UBERON:0002199,1.04e-10,46;UBERON:0002416,1.04e-10,46;UBERON:0002097,3.59e-09,41;UBERON:0003076,4.60e-09,15;UBERON:0003057,4.60e-09,15;UBERON:0000119,3.47e-08,309;UBERON:0000483,5.63e-08,306;UBERON:0004732,6.84e-08,13;UBERON:0004733,1.10e-07,12;UBERON:0002028,1.10e-07,12;UBERON:0007277,1.10e-07,12;UBERON:0007524,1.14e-07,73;UBERON:0002420,1.23e-07,9;UBERON:0007245,1.23e-07,9;UBERON:0010009,1.23e-07,9;UBERON:0010011,1.23e-07,9;UBERON:0000454,1.23e-07,9;UBERON:0000200,1.40e-07,6;UBERON:0003102,2.27e-07,99;UBERON:0003077,2.94e-07,72;UBERON:0007285,2.94e-07,72;UBERON:0000125,3.86e-07,9;UBERON:0002308,3.86e-07,9;UBERON:0002329,9.29e-07,71;UBERON:0003059,9.29e-07,71;UBERON:0007282,9.29e-07,71;UBERON:0004290,9.29e-07,71;UBERON:0009618,9.29e-07,71 | |||
|phase1_expression=1.81678379270557,2.14100523890983,1.83240725324762,4.00293193412522,3.12872766099101,0,7.59899634504932,3.79031924056099,0.522371256399677,0,0,0,0.263766978228454,3.7129905888014,6.2965501388304,2.6893005858071,3.01347264011988,0.730310090387373,2.92759679274304,1.96993692922861,1.22400414746552,0.940364164434263,3.43483184557268,0.821246550437305,0.753255837568817,0,0,0,0,1.15148819429164,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0.263384084775077,1.180258620683,0.786021525498329,2.2616164889946,0,0.651844533267181,1.89379122293893,0,0,2.3568472597987,2.21533894583621,1.08321545506006,0,0.130059347559878,0,0,0,0.14828656316206,0.267540828089713,0,0.339928028092699,3.83220493601921,1.37450978193052,0.759059076058509,0,0,0,0.301150238155546,0.639933055772092,2.49861453104692,1.18388626022008,1.64225599384209,0.201606743224732,0.802320587350522,0.144824403882799,0,4.02420515822182,0.12786256184353,0,0,1.01392563272577,2.3858578411533,0.486634870302636,4.53767122387526,2.21729397462564,2.89854792787316,10.936752804059,0,0,0,0,0.132957960518865,0,0,0,0,1.72046919021225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.759783069987479,0.662045904066094,0,1.06400514659507,0.560677600142307,0,0,4.35695449559673,0.134710672069688,0.980771418680752,3.02714855289863,6.33793516927999,0.234321431833797,7.17968176709737,2.2818872861778,5.97794722207204,2.81842796745036,1.78060238804945,2.94946694074722,8.16616685019573,3.31652656741774,7.74943358818241,16.6320400019487,9.39614331258516,0.910161361938026,0,4.04006673489759,1.50142223846357,6.09541054065202,9.2185300384976,9.80760946556863,3.60571341375832,0.226864366320042,4.30535125653269,9.1829677191984,13.563641674212,6.30191301777245,17.1067198535809,11.0785432219621,13.0281799432113,6.91982962189192,12.9591216864394,4.79624171063818,13.8995346949872,22.9537400682713,6.39017266529906,6.95189477770718,2.7129694769678,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.310983165046111,0.252320850875628,0.36497735907583,14.0804579096834,5.78916844373597,0,25.0758681137269,27.4314203034443,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,1.40241773803446,0.4115740113314,0,0,0,1.77236972004421,0,0,2.40194934417936,0,0,0,0,0,0,0,1.85488647960123,5.28339124061197,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.179117045405697,0,0,1.97065295158377,0,2.28060927094849,0.432359860250884,1.51490920111656,0.126995788584338,0,0,0,0.102827492703324,0,0.571652865261156,1.00917975910825,0.43596006883328,2.0534720029866,15.12479074366,0,2.535908257668,4.25500986535793,2.08014873822732,0,0,0.266422179016099,2.57360388584666,2.71310802695722,1.64648067356154,2.28015329005615,1.42156779497018,0.791951872933429,0.904318131178758,0,0.099972991182057,0,0,0,0,0,1.42636905040718,1.30303176000821,1.2328579353023,4.47652408099739,0,0.197030760201927,0.215627574859517,0.128343036279748,0.76228387266739,0,0,0,0,0,0,0,3.43536176813592,3.00102312635806,2.98391526069709,2.28767947683888,8.02930449587228,11.5122762974772,1.17141414992713,7.22270639346525,11.3703752027992,4.1389228517002,3.32112799267718,0.553107505625109,12.1637060255316,1.17480694477644,0.686286847621712,0.82707210449155,0,0.213455115606889,0,0,0.604780586659361,2.97729369382532,9.36118037057181,5.89386198309454,0.640695746278505,12.7926812266676,2.41280881715411,0,4.00945203886904,6.21466038595945,4.27061211271807,5.71179872101983,2.09178681227927,0,0,0,4.36294903025506,0.728364672026868,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,1.03041011647722,0,0,0.574265537996172,0.650060246036521,0,1.7400729292582,3.54311819363682,4.60511024178389,1.65403886981437,16.6501379545824,6.38073453222605,1.87498580315422,4.98579399621729,0,0,0,0,0.464845549297286,0,0,1.23213432070436,0,0,0.55597265731176,0,11.5369094501497,9.8077621662805,6.48142659341004,0.255897791311334,8.55877976067841,0,0,5.57604618508276,4.11805544604082,3.41655966802491,0.202182481573316,0,0,1.46290121726877,0,0,4.91399681068749,4.80778468642623,0,0,0.66343897524122,0,2.31510213706675,8.52663177660623,0.608731130888112,1.239293992399,0.845086807596724,8.31785842783499,3.92996164052485,0,0.709522128141196,0,0.329294892959902,0,2.79947776195986,0,0.670302275535787,0,0.941438007767792,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,1.58625035258854,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0.296964680832639,0,112.338684197592,29.2592386133866,6.90113971142017,0,0,0.398495976502139,0.552567831062295,0,3.57940388757542,0,2.48831670129446,0,0,0,0.295930216910801,0,0,63.9759612422844,124.587555831366,5.98841394003583,0,0,0,0,0,0,0,0,2.08349993919951,104.517483526033,46.7914181866583,13.7323562685375,12.4954563722284,9.75307142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| ||
|short_description=p2@CHN1 | |||
}} | }} |
Latest revision as of 08:03, 18 September 2015
Short description: | p2@CHN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CHN1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -52bp_to_ENST00000444573_5end |
EntrezGene: | CHN1 |
HGNC: | 1943 |
UniProt: | C9J1N1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.12e-13 | 76 |
skin fibroblast | 3.95e-13 | 23 |