FFCP PHASE1:Hg19::chr10:48355030..48355090,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:48355030..48355090,+ to FFCP PHASE1:Hg19::chr10:48355030..48355090,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=118738 | |EntrezGene=118738 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23535 | |HGNC=23535 | ||
|TSSclassifier=strong | |||
|UniProt=A2AH64,A2AH63,A2AH61,Q96MN9,Q05CE0 | |UniProt=A2AH64,A2AH63,A2AH61,Q96MN9,Q05CE0 | ||
|association_with_transcript=0bp_to_ENST00000433077,ENST00000436850,ENST00000442001,NM_153034,uc001jex.2,uc001jey.2_5end | |||
|cluster_id=chr10:48355030..48355090,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_ZNF488_5end | |||
|id=chr10:48355030..48355090,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.39e-11!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.36e-09,253 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.40e-08;82 | |||
|ontology_enrichment_disease=DOID:305!4.08e-13!106;DOID:0050687!1.34e-10!143;DOID:1749!4.33e-08!14;DOID:162!1.43e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.06e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.98e-11,106;DOID:1749,7.56e-10,14;DOID:0050687,1.52e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001017!9.13e-36!82;UBERON:0005743!9.25e-36!86;UBERON:0000073!1.73e-32!94;UBERON:0001016!1.73e-32!94;UBERON:0003075!1.81e-32!86;UBERON:0007284!1.81e-32!86;UBERON:0001049!3.25e-32!57;UBERON:0005068!3.25e-32!57;UBERON:0006241!3.25e-32!57;UBERON:0007135!3.25e-32!57;UBERON:0000955!7.20e-31!69;UBERON:0006238!7.20e-31!69;UBERON:0002346!2.40e-30!90;UBERON:0004121!7.18e-30!169;UBERON:0002616!5.00e-29!59;UBERON:0000033!9.76e-29!123;UBERON:0000924!1.05e-28!173;UBERON:0006601!1.05e-28!173;UBERON:0000153!8.66e-28!129;UBERON:0007811!8.66e-28!129;UBERON:0003056!4.30e-25!61;UBERON:0003080!2.09e-22!42;UBERON:0002780!2.19e-22!41;UBERON:0001890!2.19e-22!41;UBERON:0006240!2.19e-22!41;UBERON:0000064!4.42e-21!219;UBERON:0002020!5.14e-21!34;UBERON:0003528!5.14e-21!34;UBERON:0001893!6.46e-21!34;UBERON:0002791!2.49e-20!33;UBERON:0001869!1.73e-19!32;UBERON:0002619!2.08e-15!22;UBERON:0000956!3.48e-15!25;UBERON:0000203!3.48e-15!25;UBERON:0001950!4.91e-14!20;UBERON:0007023!6.96e-13!115;UBERON:0000481!3.69e-12!347;UBERON:0000062!1.39e-11!511;UBERON:0000475!4.55e-11!365;UBERON:0003076!5.99e-11!15;UBERON:0003057!5.99e-11!15;UBERON:0000063!3.07e-10!97;UBERON:0004732!1.34e-09!13;UBERON:0000119!1.95e-09!312;UBERON:0004733!7.21e-09!12;UBERON:0002028!7.21e-09!12;UBERON:0007277!7.21e-09!12;UBERON:0000483!1.01e-08!309;UBERON:0000922!4.63e-08!612;UBERON:0002308!2.50e-07!9;UBERON:0000125!2.50e-07!9;UBERON:0000477!2.75e-07!286;UBERON:0002420!2.98e-07!9;UBERON:0007245!2.98e-07!9;UBERON:0010009!2.98e-07!9;UBERON:0010011!2.98e-07!9;UBERON:0000454!2.98e-07!9;UBERON:0002680!7.29e-07!9;UBERON:0001895!7.29e-07!9;UBERON:0010092!7.29e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.37e-21;34!UBERON:0002020;1.37e-21;34!UBERON:0001893;1.50e-21;34!UBERON:0002791;2.19e-21;32!UBERON:0001869;2.77e-21;32!UBERON:0000073;7.27e-20;53!UBERON:0002616;7.27e-20;53!UBERON:0002619;3.62e-19;22!UBERON:0002780;1.70e-18;41!UBERON:0001890;1.70e-18;41!UBERON:0000956;4.52e-18;25!UBERON:0000203;4.52e-18;25!UBERON:0001950;2.04e-17;20!UBERON:0001017;2.07e-15;75!UBERON:0000955;2.38e-15;68!UBERON:0001016;1.20e-13;83!UBERON:0004732;9.15e-12;13!UBERON:0004733;7.75e-11;12!UBERON:0002028;7.75e-11;12!UBERON:0000125;6.78e-09;9!UBERON:0002308;6.78e-09;9!UBERON:0002420;8.55e-09;9!UBERON:0007245;8.55e-09;9!UBERON:0010009;8.55e-09;9!UBERON:0010011;8.55e-09;9!UBERON:0000454;8.55e-09;9!UBERON:0002680;2.71e-08;9!UBERON:0001895;2.71e-08;9!UBERON:0001032;2.90e-08;24!UBERON:0004456;2.90e-08;24!UBERON:0002104;7.35e-08;21!UBERON:0000020;1.61e-07;23!UBERON:0009663;3.75e-07;7!UBERON:0000970;4.22e-07;20!UBERON:0001871;8.04e-07;6 | |||
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| ||
|short_description=p1@ZNF488 | |||
}} | }} |
Latest revision as of 08:24, 18 September 2015
Short description: | p1@ZNF488 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF488_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000433077, ENST00000436850, ENST00000442001, NM_153034, uc001jex.2, uc001jey.2_5end |
EntrezGene: | ZNF488 |
HGNC: | 23535 |
UniProt: | A2AH64A2AH63A2AH61Q96MN9Q05CE0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.36e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.98e-11 | 106 |
squamous cell carcinoma | 7.56e-10 | 14 |
cell type cancer | 1.52e-08 | 143 |