FFCP PHASE1:Hg19::chr12:51785208..51785260,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:51785208..51785260,+
|short_description=p3@SLC4A8
|description=CAGE_peak_3_at_SLC4A8_5end
|association_with_transcript=76bp_to_uc001rym.2,uc001ryn.2,uc001...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9498 | |EntrezGene=9498 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11034 | |HGNC=11034 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=76bp_to_uc001rym.2,uc001ryn.2,uc001ryo.2,uc010sni.1_5end | |||
|cluster_id=chr12:51785208..51785260,+ | |||
|description=CAGE_peak_3_at_SLC4A8_5end | |||
|id=chr12:51785208..51785260,+ | |||
|ontology_enrichment_celltype=CL:0000557!4.33e-30!71;CL:0000839!9.27e-29!70;CL:0000766!2.94e-27!76;CL:0002031!1.00e-26!124;CL:0000037!4.56e-26!172;CL:0000566!4.56e-26!172;CL:0002009!1.04e-25!65;CL:0002194!1.71e-25!63;CL:0000576!1.71e-25!63;CL:0000040!1.71e-25!63;CL:0000559!1.71e-25!63;CL:0000738!2.12e-25!140;CL:0002057!2.35e-25!42;CL:0002032!6.71e-25!165;CL:0000837!6.71e-25!165;CL:0000763!2.00e-24!112;CL:0000049!2.00e-24!112;CL:0002087!9.00e-24!119;CL:0000988!4.26e-23!182;CL:0000860!5.85e-22!45;CL:0000134!1.40e-08!358;CL:0002320!1.18e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.72e-32;33!CL:0002057;7.72e-32;33!CL:0000473;1.06e-31;39!CL:0000234;1.06e-31;39!CL:0000576;1.32e-25;48!CL:0000766;1.47e-21;69!CL:0000763;5.81e-13;100!CL:0000738;4.25e-10;136!CL:0002087;6.44e-09;104!CL:0000097;4.32e-08;5!CL:0000235;1.63e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,7.51e-54,67;CL:0000839,1.44e-52,66;CL:0000766,6.17e-52,72;CL:0002194,2.96e-48,59;CL:0000576,2.96e-48,59;CL:0000040,2.96e-48,59;CL:0000559,2.96e-48,59;CL:0000473,4.69e-48,48;CL:0000234,4.69e-48,48;CL:0002009,4.97e-46,61;CL:0000860,9.28e-42,42;CL:0002057,9.28e-42,42;CL:0000763,9.26e-41,108;CL:0000049,9.26e-41,108;CL:0002031,2.37e-36,120;CL:0000738,1.01e-35,136;CL:0000037,2.59e-34,168;CL:0002032,5.88e-34,161;CL:0000837,5.88e-34,161;CL:0002087,1.63e-33,115;CL:0000988,4.45e-31,177;CL:0002393,2.06e-08,9;CL:0002397,2.06e-08,9;CL:0000097,4.28e-08,5;CL:0002028,4.28e-08,5;CL:0000134,8.34e-08,354;CL:0000235,1.50e-07,6;CL:0002320,3.34e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.89e-29;42!CL:0000049;2.18e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.76e-27!112;UBERON:0002371!2.68e-25!80;UBERON:0002390!4.81e-25!102;UBERON:0003061!4.81e-25!102;UBERON:0001474!4.66e-21!86;UBERON:0004765!1.74e-18!101;UBERON:0001434!1.74e-18!101;UBERON:0002405!2.12e-17!115;UBERON:0007023!1.57e-12!115;UBERON:0001049!3.98e-12!57;UBERON:0005068!3.98e-12!57;UBERON:0006241!3.98e-12!57;UBERON:0007135!3.98e-12!57;UBERON:0003081!3.57e-10!216;UBERON:0002780!6.10e-10!41;UBERON:0001890!6.10e-10!41;UBERON:0006240!6.10e-10!41;UBERON:0002616!1.11e-09!59;UBERON:0003080!2.34e-09!42;UBERON:0001893!5.76e-09!34;UBERON:0002020!7.99e-09!34;UBERON:0003528!7.99e-09!34;UBERON:0002791!1.96e-08!33;UBERON:0001869!8.72e-08!32;UBERON:0000955!3.07e-07!69;UBERON:0006238!3.07e-07!69;UBERON:0001017!3.80e-07!82;UBERON:0005743!6.70e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.75e-11;34!UBERON:0002020;1.75e-11;34!UBERON:0001893;2.42e-11;34!UBERON:0002791;6.59e-10;32!UBERON:0001869;8.08e-10;32!UBERON:0000073;1.49e-09;53!UBERON:0002616;1.49e-09;53!UBERON:0002780;1.56e-09;41!UBERON:0001890;1.56e-09;41!UBERON:0002619;1.38e-08;22!UBERON:0000125;2.05e-08;9!UBERON:0002308;2.05e-08;9!UBERON:0002420;1.04e-07;9!UBERON:0007245;1.04e-07;9!UBERON:0010009;1.04e-07;9!UBERON:0010011;1.04e-07;9!UBERON:0000454;1.04e-07;9!UBERON:0001950;2.69e-07;20!UBERON:0000956;4.17e-07;25!UBERON:0000203;4.17e-07;25!UBERON:0002298;4.51e-07;6 | |||
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| ||
|short_description=p3@SLC4A8 | |||
}} | }} |
Latest revision as of 20:18, 18 September 2015
Short description: | p3@SLC4A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC4A8_5end |
Coexpression cluster: | NA |
Association with transcript: | 76bp_to_uc001rym.2, uc001ryn.2, uc001ryo.2, uc010sni.1_5end |
EntrezGene: | SLC4A8 |
HGNC: | 11034 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 7.51e-54 | 67 |
myeloid lineage restricted progenitor cell | 1.44e-52 | 66 |
myeloid leukocyte | 6.17e-52 | 72 |
monopoietic cell | 2.96e-48 | 59 |
monocyte | 2.96e-48 | 59 |
monoblast | 2.96e-48 | 59 |
promonocyte | 2.96e-48 | 59 |
defensive cell | 4.69e-48 | 48 |
phagocyte | 4.69e-48 | 48 |
macrophage dendritic cell progenitor | 4.97e-46 | 61 |
classical monocyte | 9.28e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.28e-42 | 42 |
myeloid cell | 9.26e-41 | 108 |
common myeloid progenitor | 9.26e-41 | 108 |
hematopoietic lineage restricted progenitor cell | 2.37e-36 | 120 |
leukocyte | 1.01e-35 | 136 |
hematopoietic stem cell | 2.59e-34 | 168 |
hematopoietic oligopotent progenitor cell | 5.88e-34 | 161 |
hematopoietic multipotent progenitor cell | 5.88e-34 | 161 |
nongranular leukocyte | 1.63e-33 | 115 |
hematopoietic cell | 4.45e-31 | 177 |
intermediate monocyte | 2.06e-08 | 9 |
CD14-positive, CD16-positive monocyte | 2.06e-08 | 9 |
mast cell | 4.28e-08 | 5 |
basophil mast progenitor cell | 4.28e-08 | 5 |
mesenchymal cell | 8.34e-08 | 354 |
macrophage | 1.50e-07 | 6 |
connective tissue cell | 3.34e-07 | 361 |