FFCP PHASE1:Hg19::chr19:47104494..47104549,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=808 | |EntrezGene=808 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1449 | |HGNC=1449 | ||
|TSSclassifier=strong | |||
|UniProt=B4DJ51,P62158,Q9BRL5 | |UniProt=B4DJ51,P62158,Q9BRL5 | ||
|association_with_transcript=0bp_to_NM_005184,uc002pew.2_5end | |association_with_transcript=0bp_to_NM_005184,uc002pew.2_5end | ||
|cluster_id=chr19:47104494..47104549,+ | |||
|description=CAGE_peak_4_at_CALM3_5end | |description=CAGE_peak_4_at_CALM3_5end | ||
|id=chr19:47104494..47104549,+ | |id=chr19:47104494..47104549,+ | ||
|ontology_enrichment_celltype=CL:0000222!7.13e-13!119;CL:0000183!3.41e-11!59;CL:0000115!4.10e-11!35;CL:0002078!3.44e-10!44;CL:0000187!5.34e-09!54;CL:0000680!9.42e-09!57;CL:0000056!9.42e-09!57;CL:0000355!9.42e-09!57;CL:0000192!4.50e-08!42;CL:0000514!4.50e-08!42;CL:0000393!9.69e-08!60;CL:0000211!9.69e-08!60 | |ontology_enrichment_celltype=CL:0000222!7.13e-13!119;CL:0000183!3.41e-11!59;CL:0000115!4.10e-11!35;CL:0002078!3.44e-10!44;CL:0000187!5.34e-09!54;CL:0000680!9.42e-09!57;CL:0000056!9.42e-09!57;CL:0000355!9.42e-09!57;CL:0000192!4.50e-08!42;CL:0000514!4.50e-08!42;CL:0000393!9.69e-08!60;CL:0000211!9.69e-08!60 | ||
|ontology_enrichment_celltype_v019=CL:0000115;6.68e-10;36!CL:0002078;7.80e-07;45 | |ontology_enrichment_celltype_v019=CL:0000115;6.68e-10;36!CL:0002078;7.80e-07;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.14e-13,121;CL:0000115,1.14e-11,36;CL:0002078,1.06e-10,45;CL:0000187,4.45e-09,55;CL:0000680,7.80e-09,58;CL:0000056,7.80e-09,58;CL:0000355,7.80e-09,58;CL:0000192,3.81e-08,43;CL:0000514,3.81e-08,43;CL:0000393,7.97e-08,61;CL:0000211,7.97e-08,61 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;2.27e-14;32!UBERON:0003528;2.39e-13;34!UBERON:0002020;2.39e-13;34!UBERON:0002619;3.75e-13;22!UBERON:0002791;5.11e-13;32!UBERON:0000956;6.55e-13;25!UBERON:0000203;6.55e-13;25!UBERON:0001893;1.15e-12;34!UBERON:0001950;5.54e-12;20!UBERON:0002780;8.05e-08;41!UBERON:0001890;8.05e-08;41!UBERON:0000073;2.30e-07;53!UBERON:0002616;2.30e-07;53!UBERON:0003914;7.56e-07;74 | |ontology_enrichment_uberon_v019=UBERON:0001869;2.27e-14;32!UBERON:0003528;2.39e-13;34!UBERON:0002020;2.39e-13;34!UBERON:0002619;3.75e-13;22!UBERON:0002791;5.11e-13;32!UBERON:0000956;6.55e-13;25!UBERON:0000203;6.55e-13;25!UBERON:0001893;1.15e-12;34!UBERON:0001950;5.54e-12;20!UBERON:0002780;8.05e-08;41!UBERON:0001890;8.05e-08;41!UBERON:0000073;2.30e-07;53!UBERON:0002616;2.30e-07;53!UBERON:0003914;7.56e-07;74 | ||
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|short_description=p4@CALM3 | |short_description=p4@CALM3 | ||
}} | }} |
Latest revision as of 20:43, 18 September 2015
Short description: | p4@CALM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CALM3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_005184, uc002pew.2_5end |
EntrezGene: | CALM3 |
HGNC: | 1449 |
UniProt: | B4DJ51P62158Q9BRL5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.14e-13 | 121 |
endothelial cell | 1.14e-11 | 36 |
meso-epithelial cell | 1.06e-10 | 45 |
muscle cell | 4.45e-09 | 55 |
muscle precursor cell | 7.80e-09 | 58 |
myoblast | 7.80e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.80e-09 | 58 |
smooth muscle cell | 3.81e-08 | 43 |
smooth muscle myoblast | 3.81e-08 | 43 |
electrically responsive cell | 7.97e-08 | 61 |
electrically active cell | 7.97e-08 | 61 |