FFCP PHASE1:Hg19::chr17:2240963..2240989,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9905 | |EntrezGene=9905 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29026 | |HGNC=29026 | ||
|TSSclassifier=strong | |||
|UniProt=B9A6J3,O43147 | |UniProt=B9A6J3,O43147 | ||
|association_with_transcript=155bp_to_NM_001098509_5end | |association_with_transcript=155bp_to_NM_001098509_5end | ||
|cluster_id=chr17:2240963..2240989,+ | |||
|description=CAGE_peak_4_at_SGSM2_5end | |description=CAGE_peak_4_at_SGSM2_5end | ||
|id=chr17:2240963..2240989,+ | |id=chr17:2240963..2240989,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000840;3.13e-09;5!CL:0000047;1.65e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,2.96e-09,5;CL:0001029,2.96e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.98e-08;82!UBERON:0010122;3.84e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.62e-17!82;UBERON:0002780!9.70e-17!41;UBERON:0001890!9.70e-17!41;UBERON:0006240!9.70e-17!41;UBERON:0001049!2.64e-16!57;UBERON:0005068!2.64e-16!57;UBERON:0006241!2.64e-16!57;UBERON:0007135!2.64e-16!57;UBERON:0003080!6.67e-16!42;UBERON:0005743!1.18e-15!86;UBERON:0000955!2.36e-15!69;UBERON:0006238!2.36e-15!69;UBERON:0002616!4.62e-15!59;UBERON:0000073!1.08e-13!94;UBERON:0001016!1.08e-13!94;UBERON:0001869!2.54e-13!32;UBERON:0003075!6.88e-13!86;UBERON:0007284!6.88e-13!86;UBERON:0003056!9.48e-13!61;UBERON:0001893!1.07e-12!34;UBERON:0002020!2.20e-12!34;UBERON:0003528!2.20e-12!34;UBERON:0000153!2.25e-12!129;UBERON:0007811!2.25e-12!129;UBERON:0002346!2.93e-12!90;UBERON:0002791!4.76e-12!33;UBERON:0000033!6.45e-12!123;UBERON:0004121!4.29e-11!169;UBERON:0000924!8.54e-11!173;UBERON:0006601!8.54e-11!173;UBERON:0001950!1.81e-10!20;UBERON:0000956!2.84e-10!25;UBERON:0000203!2.84e-10!25;UBERON:0002619!5.04e-10!22;UBERON:0007023!2.91e-07!115 | |ontology_enrichment_uberon=UBERON:0001017!5.62e-17!82;UBERON:0002780!9.70e-17!41;UBERON:0001890!9.70e-17!41;UBERON:0006240!9.70e-17!41;UBERON:0001049!2.64e-16!57;UBERON:0005068!2.64e-16!57;UBERON:0006241!2.64e-16!57;UBERON:0007135!2.64e-16!57;UBERON:0003080!6.67e-16!42;UBERON:0005743!1.18e-15!86;UBERON:0000955!2.36e-15!69;UBERON:0006238!2.36e-15!69;UBERON:0002616!4.62e-15!59;UBERON:0000073!1.08e-13!94;UBERON:0001016!1.08e-13!94;UBERON:0001869!2.54e-13!32;UBERON:0003075!6.88e-13!86;UBERON:0007284!6.88e-13!86;UBERON:0003056!9.48e-13!61;UBERON:0001893!1.07e-12!34;UBERON:0002020!2.20e-12!34;UBERON:0003528!2.20e-12!34;UBERON:0000153!2.25e-12!129;UBERON:0007811!2.25e-12!129;UBERON:0002346!2.93e-12!90;UBERON:0002791!4.76e-12!33;UBERON:0000033!6.45e-12!123;UBERON:0004121!4.29e-11!169;UBERON:0000924!8.54e-11!173;UBERON:0006601!8.54e-11!173;UBERON:0001950!1.81e-10!20;UBERON:0000956!2.84e-10!25;UBERON:0000203!2.84e-10!25;UBERON:0002619!5.04e-10!22;UBERON:0007023!2.91e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.72e-36;32!UBERON:0001950;4.15e-35;20!UBERON:0001893;3.19e-34;34!UBERON:0002791;3.77e-34;32!UBERON:0002619;1.11e-31;22!UBERON:0002780;1.19e-30;41!UBERON:0001890;1.19e-30;41!UBERON:0003528;6.22e-30;34!UBERON:0002020;6.22e-30;34!UBERON:0000956;1.56e-27;25!UBERON:0000203;1.56e-27;25!UBERON:0000073;2.98e-20;53!UBERON:0002616;2.98e-20;53!UBERON:0000200;2.20e-19;6!UBERON:0001017;1.25e-15;75!UBERON:0000955;7.50e-15;68!UBERON:0000369;3.77e-13;4!UBERON:0002435;3.77e-13;4!UBERON:0000204;3.77e-13;4!UBERON:0002420;2.93e-12;9!UBERON:0007245;2.93e-12;9!UBERON:0010009;2.93e-12;9!UBERON:0010011;2.93e-12;9!UBERON:0000454;2.93e-12;9!UBERON:0001871;1.35e-11;6!UBERON:0009663;4.17e-11;7!UBERON:0001870;1.69e-10;3!UBERON:0005383;3.07e-10;3!UBERON:0005382;3.07e-10;3!UBERON:0002021;3.10e-10;5!UBERON:0001016;3.77e-10;83!UBERON:0000125;1.49e-08;9!UBERON:0002308;1.49e-08;9!UBERON:0002702;5.93e-08;2!UBERON:0002771;1.10e-07;2!UBERON:0003296;1.67e-07;4!UBERON:0010133;1.67e-07;4!UBERON:0000007;2.60e-07;2!UBERON:0001873;3.84e-07;2!UBERON:0001894;4.12e-07;7!UBERON:0007023;4.72e-07;114 | |||
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| ||
|short_description=p4@SGSM2 | |short_description=p4@SGSM2 | ||
}} | }} |
Latest revision as of 03:00, 19 September 2015
Short description: | p4@SGSM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SGSM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 155bp_to_NM_001098509_5end |
EntrezGene: | SGSM2 |
HGNC: | 29026 |
UniProt: | B9A6J3O43147 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 2.96e-09 | 5 |
common dendritic progenitor | 2.96e-09 | 5 |