FFCP PHASE1:Hg19::chr11:64545222..64545241,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7536 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12950 | |||
|TSSclassifier=strong | |||
|UniProt=C9J792,C9JJE2,B7Z1Q1,Q15637 | |||
|association_with_transcript=0bp_to_ENST00000432725,ENST00000433274,NM_001178031,uc010rnn.1_5end | |||
|cluster_id=chr11:64545222..64545241,- | |||
|coexpression_cluster_id=C1347 | |||
|description=CAGE_peak_14_at_SF1_5end | |||
|id=chr11:64545222..64545241,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.65e-09;3!CL:0000094;9.70e-09;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.66e-09,3;CL:0000094,9.23e-09,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.70e-20!57;UBERON:0005068!2.70e-20!57;UBERON:0006241!2.70e-20!57;UBERON:0007135!2.70e-20!57;UBERON:0007023!2.94e-19!115;UBERON:0002616!4.60e-19!59;UBERON:0000955!5.10e-19!69;UBERON:0006238!5.10e-19!69;UBERON:0002780!5.44e-18!41;UBERON:0001890!5.44e-18!41;UBERON:0006240!5.44e-18!41;UBERON:0003080!4.44e-17!42;UBERON:0001017!9.48e-17!82;UBERON:0002020!2.01e-16!34;UBERON:0003528!2.01e-16!34;UBERON:0001893!2.01e-16!34;UBERON:0001869!4.04e-16!32;UBERON:0002791!9.78e-16!33;UBERON:0005743!2.50e-15!86;UBERON:0003075!1.16e-13!86;UBERON:0007284!1.16e-13!86;UBERON:0002619!7.39e-13!22;UBERON:0000956!6.41e-12!25;UBERON:0000203!6.41e-12!25;UBERON:0002346!6.98e-12!90;UBERON:0000073!1.20e-11!94;UBERON:0001016!1.20e-11!94;UBERON:0003056!1.36e-11!61;UBERON:0001950!1.70e-11!20;UBERON:0000033!1.10e-10!123;UBERON:0000153!4.55e-10!129;UBERON:0007811!4.55e-10!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.58e-41;32!UBERON:0002619;3.92e-40;22!UBERON:0002791;6.43e-38;32!UBERON:0003528;3.18e-37;34!UBERON:0002020;3.18e-37;34!UBERON:0001893;4.24e-37;34!UBERON:0001950;1.51e-35;20!UBERON:0000956;8.06e-35;25!UBERON:0000203;8.06e-35;25!UBERON:0002780;1.03e-28;41!UBERON:0001890;1.03e-28;41!UBERON:0000073;5.31e-25;53!UBERON:0002616;5.31e-25;53!UBERON:0000955;1.35e-18;68!UBERON:0000200;3.01e-15;6!UBERON:0001017;6.94e-15;75!UBERON:0000349;7.42e-13;5!UBERON:0002420;9.86e-13;9!UBERON:0007245;9.86e-13;9!UBERON:0010009;9.86e-13;9!UBERON:0010011;9.86e-13;9!UBERON:0000454;9.86e-13;9!UBERON:0001871;1.24e-12;6!UBERON:0000178;1.69e-12;15!UBERON:0000179;1.69e-12;15!UBERON:0000463;1.69e-12;15!UBERON:0001016;2.63e-11;83!UBERON:0000369;1.25e-10;4!UBERON:0002435;1.25e-10;4!UBERON:0000204;1.25e-10;4!UBERON:0007023;8.91e-10;114!UBERON:0000125;2.14e-09;9!UBERON:0002308;2.14e-09;9!UBERON:0001872;5.92e-09;5!UBERON:0009663;7.55e-09;7!UBERON:0002390;1.33e-08;32!UBERON:0002021;2.32e-08;5!UBERON:0001870;3.17e-08;3!UBERON:0005383;3.17e-08;3!UBERON:0005382;3.17e-08;3!UBERON:0002298;7.98e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,6.97e-47,32;UBERON:0001893,9.42e-44,34;UBERON:0000073,2.01e-43,53;UBERON:0002616,2.01e-43,53;UBERON:0003528,2.37e-43,34;UBERON:0002020,2.37e-43,34;UBERON:0002791,5.82e-43,32;UBERON:0002780,2.62e-41,41;UBERON:0001890,2.62e-41,41;UBERON:0003080,2.62e-41,41;UBERON:0006240,2.62e-41,41;UBERON:0002619,7.32e-41,22;UBERON:0001049,1.28e-40,56;UBERON:0005068,1.28e-40,56;UBERON:0006241,1.28e-40,56;UBERON:0007135,1.28e-40,56;UBERON:0000955,3.63e-38,68;UBERON:0006238,3.63e-38,68;UBERON:0001950,3.79e-36,20;UBERON:0000956,1.86e-35,25;UBERON:0000203,1.86e-35,25;UBERON:0001017,1.91e-34,81;UBERON:0007023,6.77e-33,114;UBERON:0001016,5.25e-30,89;UBERON:0003056,2.66e-25,61;UBERON:0003075,7.13e-25,82;UBERON:0007284,7.13e-25,82;UBERON:0002346,2.69e-23,86;UBERON:0010371,5.21e-19,104;UBERON:0000200,2.55e-15,6;UBERON:0010314,2.84e-15,132;UBERON:0000349,3.03e-13,5;UBERON:0002420,5.18e-13,9;UBERON:0007245,5.18e-13,9;UBERON:0010009,5.18e-13,9;UBERON:0010011,5.18e-13,9;UBERON:0000454,5.18e-13,9;UBERON:0001871,5.98e-13,6;UBERON:0000178,1.53e-12,15;UBERON:0000179,1.53e-12,15;UBERON:0000463,1.53e-12,15;UBERON:0004121,7.59e-12,171;UBERON:0000924,7.59e-12,171;UBERON:0006601,7.59e-12,171;UBERON:0000025,4.27e-11,192;UBERON:0000369,1.15e-10,4;UBERON:0002435,1.15e-10,4;UBERON:0000204,1.15e-10,4;UBERON:0010082,1.15e-10,4;UBERON:0011216,5.85e-10,223;UBERON:0000125,1.86e-09,9;UBERON:0002308,1.86e-09,9;UBERON:0001872,5.66e-09,5;UBERON:0009663,6.13e-09,7;UBERON:0002021,1.81e-08,5;UBERON:0001870,2.16e-08,3;UBERON:0005383,2.99e-08,3;UBERON:0005382,2.99e-08,3;UBERON:0004111,5.87e-07,240;UBERON:0002298,7.12e-07,6 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.422863212287913,1.0007329835313,0.446961094427288,0,0,0,0,0,2.09340350391728,0,0,0.618831764800233,0.331397375727916,0,0,0,0.487932798790507,0.246242116153576,0.204000691244253,0.313454721478088,0,0.410623275218653,0.251085279189606,0.152826811495903,0.0821005894499457,0.314843125254717,0.786728553697808,0.383829398097213,0.309632246632152,0,0.30120591877825,0,0.0774672005803016,0,0,0,0,0.434021741431704,0,0,0,0.726991193897824,0,0.970336244751265,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,0,0,0,0,0,0.376484679085209,1.63743690034707,0.224723484445085,0,0.320929027076094,0.639337125799041,0,0.398927315243264,0,0.290209238628584,0,0,0.502497330513487,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0.422510572623884,0.425208599930087,0,0.112328631146495,0.150176892841506,0.48217676009124,0,0.19891667719909,0.182664153764634,0,1.63841583378639,0,0,0,0,0.661044872784862,0,0.569212969109448,0,0.764546456250458,0,0,0.263384084775077,0,0,0.411202997999018,0.501559486172034,0.977766799900771,0.473447805734733,0,1.00269411196656,0.294605907474837,0.221533894583621,0.541607727530031,0.896639238079726,0.910415432919148,0.328875809207352,0,0.579606171470105,0.14828656316206,0.267540828089713,0,0.566546713487831,0,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0.579297615531196,2.43806866313962,0,0,0,0,0,0,0,0.378139268656271,0.665188192387692,0.527008714158756,4.32230949142452,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0.56530794192401,0.838998872419812,0,0,0.516833518338658,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0.225222960966644,0,0.949265659568129,0,2.63560834872127,11.6334079244498,0.436094052142534,0.496971951695318,0.12663051166458,0.264818361626438,0,0.709336764396714,0,0,0.49333509683432,0.933633106199299,0,0.163461903113459,0.302714855289863,0,0.468642863667593,0,0,0,0.23486899728753,0.323745888736263,0.280901613404497,0.816616685019573,0.245668634623536,0.103325781175765,0,0,0,0,0.505008341862199,0.250237039743928,0.277064115484183,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0.80823028409406,0.710019185033229,0.302256294682921,0.339121184620975,0,0.272746120590835,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,1.44375896333917,0.236613600079688,0.168584690078102,0.241011029883482,0.110293972732394,0,0.237270619111097,0.269662616320329,0.196221465125346,0.38474715694639,0.738155454624648,1.40241773803446,1.2347220339942,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0.288732895522148,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0.581267877027924,0,0.492663237895943,0.088048434013226,0.207328115540772,0.144119953416961,0,0.126995788584338,0.381988425558278,0,0,0,0.300343057843917,0,0.224262168690721,0,0.22001485746285,0.258543431515556,0,0,0.26593811658487,0,1.02882949704857,1.41849132023278,0.532844358032199,0.142977993658148,0.542621605391443,0.823240336780769,0.325736184293735,0,0,0.602878754119172,2.61460037580088,0,0,0,0,0.479249710983165,0,0,0.434343920002738,0,0.179060963239896,0.112085143993527,0,0.215627574859517,0.128343036279748,0,1.30139853857622,0,0.335032530668698,0,15.7291475028908,17.9496875522415,14.5045429702612,0,1.00034104211935,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0.368738337083406,0,0,0.343143423810856,0,1.50999940573032,0.213455115606889,0,0,0,0.496215615637554,0,0.561320188866147,0.384417447767103,0.511707249066704,0.321707842287215,0,0,0,1.06765302817952,0,0.348631135379878,0,0.40101294060657,0,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,1.11937377361089,0.877039506583738,0.522870902049801,0,0,0,0,0.366277859273374,0.082509499920588,0.574265537996172,0,0,0,0.616194468458578,0,0.275673144969061,0,0.870100163485371,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0,0.929691098594572,0,0,0,1.59691809095107,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0.190630193923825,0,0.855877976067841,0,0.78494864019923,0.179872457583315,0,0.235624804691373,0.606547444719948,1.58510321173008,0.421258456238981,0,0,0,0.409499734223957,0.424216295861138,0,0.551365343546124,1.32687795048244,0.438450885253763,1.15755106853338,0.655894752046633,0,0,0,0,0,0.35667105148125,0.709522128141196,0.211107635297664,0,0,0.699869440489966,0.192444225451024,0,0,0.188287601553558,0,0,0,0,2.53723804616085,6.117097657139,1.70894156152249,3.09701308095126,4.52498500394814,2.59389324477087,4.86028293514303,2.37937552888281,0.213648142254946,0,0,0.185803175125719,0,0.0711418433484141,0.478278818186467,0.199579371432817,0,0.423347165447766,0,0,0.228234679033192,0.313359791546046,2.50634477090067,0.169291777801603,0.1605880751037,0,0.851692475380653,0,0.921722292925374,0,0.333698283423817,0.19538809540204,0,0,0,0.33307196799782,0,0,0.146508179271894,0.485442086998054,0.111443384277478,0,0,0,0,1.9882952955326,2.67271891179974,0,0,0.422250816255987,0.398495976502139,0,0.503865495708552,0,0.246169610922139,0,0,0,1.02314474045374,0.0986434056369336,0,0,2.90799823828566,2.41197055220813,1.99613798001194,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0.868124974666461,1.77148277162768,2.05013945663194,0,0.995213339381022,1.77328571372128,1.75508317723178,0,0.278847488557207,0,0.113942055847001,0,0,0,0,0.0915975934018623,0.533034776018635,1.02193298195737,0.156980256395025,0,0,0,0.167821586975843,0.569261198172555,0,0,0,0.424059214301822,0.216388639742091,0,0.265372693510018,0,0.296521128680622,0.123563938946503,0.104421949505455,0.539209063845416,0,4.2167600230561,0.364909578431332,0.19566461893209,0,0.394584402849391,0,1.83643656978294,0.063186579628488,0.300646838828985,0.518440956986236,0.664653872707185,0,0,0,0.284609546029793,0,0.173559738335131,0,0.34823682632161,0.52418000472609,0.51595809741485,0.483781656445426,0.146178634172371,0.328461828212837,0,0,0.451961481561065,0,0,3.98858014522036,0.195551382734803,0,0.213452994739353,0,0,0.572682980829578,0.171594997861965,0,0,0.471388069233591,0.407712618220842,0.209205692624666,0.407992870545287,0,0.600420288709789,1.64286454670392,1.27746588066972,0,0,0,0.229160424011684,0,0,0.429226048136571,0.669514372325618,0.134366944973453,0,0,0.0787831823072236,0,0.0674035438541849,0,0,3.97614844904652,2.72406812223151,0,0.137539436597234,0,0,0,5.10296275927407,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,2.17199840701485,0,0.979762080328227,0,0.082092520749339,0.170388021785422,0.566560457600628,0,0,0.775697738169303,1.3223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0,0,2.65820453990096,2.44052529803926,1.6274820991845,0.573409195690071,1.99672292766334,2.2354705058898,0.138348634936231,0,0.151649117541648,0,0,0,0,0.447764408660622,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0,0.414706207840855,0,0,0,0.380805212168795,0.406870733204662,0,0.107410557042488,0,0.398095888698616,0.800055529326307,0.686791410365586,0.673498977531838,0,0.385239660814607,0,0,0,0.231522474323834,0.244736704506468,0.358177682162975,0,0,0.176689145945881,0,0.337884881306145,0.256241518587947,0,0.303859956177382,3.17994403148981,0.389720617678777,0.132864840313363,0.817826971279221,0,0.491545817507439,0.211312123358627,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,3.66106583049819,0,2.23487402680012,2.66651273512982,1.76450187355203,3.73449163306777,3.39098855826887,0,0.392590874004102,0.11796972334774,0.366857197043358,0,0,0,0.198916222116275,0.300841313397029,0,0,0,0.163771917510097,0,3.7821047386301,4.68646859168308,2.68692835451539,3.17079050969534,0.546974809018219,0.548257766857182,0.496211178389294,0,0.511049710558381,1.60710550763486,0.336283722218824,0.606965604236632,0,0.443511850813194,0.691403925334676,0.171488009437418,4.2820931775404,3.22286590457961,0.472775363535873,0,0.156986185701028,3.29942738823604,0,0,0.431855182437243,0,0.357382720883282,0.316027223465453,1.27865567904938,0.173858272302579,0,0.62164849248911,0.17071847709395,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0,0.098150233615243,0.243835849964539,0,0.205325613712494,0,0.485710993059139,0.935757853848423,0.198950775161368,0.237840181555137,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0.981542335574726,0.297046400327086,0,0,0.563903507879121,0.580120991762195,0,0,0,0,0,0,0.286679166302903,0,4.69141282317311,1.30905207102113,0,0.371995018166751,0,1.29787968637137,0.126166424835079,0.109265571963696,0,0.203977659483963,0,0,0,8.94188638975225,19.2934173712448,0.829169439458779,0.517164979309476,0.213233981900981,0,0.129177819672012,0.186224142887574,0,0.0636471582781649,0,0.217716747896961,0,0.134704106029175,0,0.332660356546013,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0.244482888365733,0.813792356631477,0.665756774185513,0.201273793591026,0 | |||
|short_description=p14@SF1 | |||
}} |
Latest revision as of 04:31, 19 September 2015
Short description: | p14@SF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SF1_5end |
Coexpression cluster: | C1347_testis_Neutrophils_Eosinophils_CD14_Basophils_blood_Whole |
Association with transcript: | 0bp_to_ENST00000432725, ENST00000433274, NM_001178031, uc010rnn.1_5end |
EntrezGene: | SF1 |
HGNC: | 12950 |
UniProt: | C9J792C9JJE2B7Z1Q1Q15637 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.66e-09 | 3 |
granulocyte | 9.23e-09 | 8 |