FFCP PHASE1:Hg19::chr3:58318594..58318694,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54899 | |EntrezGene=54899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23326 | |HGNC=23326 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z7A4,E9PD56,F8WAW8,Q32NE9 | |UniProt=Q7Z7A4,E9PD56,F8WAW8,Q32NE9 | ||
|association_with_transcript=0bp_to_ENST00000302779,ENST00000356151,ENST00000383715,ENST00000383716,ENST00000463280,ENST00000468776,ENST00000479241,ENST00000484288,ENST00000536660,NM_017771,uc003djx.1,uc003djy.1,uc003djz.1,uc003dka.1,uc003dkb.1,uc003dkc.1,uc003dkd.1,uc010hnj.1,uc011bfe.1_5end | |association_with_transcript=0bp_to_ENST00000302779,ENST00000356151,ENST00000383715,ENST00000383716,ENST00000463280,ENST00000468776,ENST00000479241,ENST00000484288,ENST00000536660,NM_017771,uc003djx.1,uc003djy.1,uc003djz.1,uc003dka.1,uc003dkb.1,uc003dkc.1,uc003dkd.1,uc010hnj.1,uc011bfe.1_5end | ||
|cluster_id=chr3:58318594..58318694,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_1_at_PXK_5end | |description=CAGE_peak_1_at_PXK_5end | ||
|id=chr3:58318594..58318694,+ | |id=chr3:58318594..58318694,+ | ||
|ontology_enrichment_celltype=CL:0002320!3.17e-19!365;CL:0000134!1.73e-18!358;CL:0000763!9.35e-17!112;CL:0000049!9.35e-17!112;CL:0000766!3.09e-16!76;CL:0000037!4.30e-16!172;CL:0000566!4.30e-16!172;CL:0002032!3.90e-15!165;CL:0000837!3.90e-15!165;CL:0002009!5.22e-15!65;CL:0002194!8.55e-15!63;CL:0000576!8.55e-15!63;CL:0000040!8.55e-15!63;CL:0000559!8.55e-15!63;CL:0002057!1.85e-14!42;CL:0000557!2.68e-14!71;CL:0000988!2.99e-14!182;CL:0000738!4.88e-14!140;CL:0000219!8.55e-14!390;CL:0000048!2.20e-13!430;CL:0000839!2.80e-13!70;CL:0002087!3.39e-12!119;CL:0000723!4.79e-12!436;CL:0000860!9.62e-12!45;CL:0002031!3.43e-11!124;CL:0000034!1.07e-10!444 | |ontology_enrichment_celltype=CL:0002320!3.17e-19!365;CL:0000134!1.73e-18!358;CL:0000763!9.35e-17!112;CL:0000049!9.35e-17!112;CL:0000766!3.09e-16!76;CL:0000037!4.30e-16!172;CL:0000566!4.30e-16!172;CL:0002032!3.90e-15!165;CL:0000837!3.90e-15!165;CL:0002009!5.22e-15!65;CL:0002194!8.55e-15!63;CL:0000576!8.55e-15!63;CL:0000040!8.55e-15!63;CL:0000559!8.55e-15!63;CL:0002057!1.85e-14!42;CL:0000557!2.68e-14!71;CL:0000988!2.99e-14!182;CL:0000738!4.88e-14!140;CL:0000219!8.55e-14!390;CL:0000048!2.20e-13!430;CL:0000839!2.80e-13!70;CL:0002087!3.39e-12!119;CL:0000723!4.79e-12!436;CL:0000860!9.62e-12!45;CL:0002031!3.43e-11!124;CL:0000034!1.07e-10!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.85e-13;33!CL:0002057;2.85e-13;33!CL:0000473;1.78e-11;39!CL:0000234;1.78e-11;39!CL:0000576;3.90e-10;48!CL:0000766;2.53e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.55e-20,361;CL:0000134,8.83e-20,354;CL:0000766,8.01e-19,72;CL:0000763,8.50e-19,108;CL:0000049,8.50e-19,108;CL:0002009,9.70e-18,61;CL:0000037,1.27e-17,168;CL:0002194,1.47e-17,59;CL:0000576,1.47e-17,59;CL:0000040,1.47e-17,59;CL:0000559,1.47e-17,59;CL:0000557,8.81e-17,67;CL:0002032,1.21e-16,161;CL:0000837,1.21e-16,161;CL:0000988,7.45e-16,177;CL:0000839,1.17e-15,66;CL:0000738,1.28e-15,136;CL:0000219,7.38e-15,386;CL:0000473,7.86e-15,48;CL:0000234,7.86e-15,48;CL:0000048,1.13e-14,427;CL:0000860,1.85e-14,42;CL:0002057,1.85e-14,42;CL:0002087,8.67e-14,115;CL:0000723,2.91e-13,433;CL:0002031,1.17e-12,120;CL:0000034,7.79e-12,441 | |||
|ontology_enrichment_development_v019=CL:0002057;9.34e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.00e-23!57;UBERON:0005068!6.00e-23!57;UBERON:0006241!6.00e-23!57;UBERON:0007135!6.00e-23!57;UBERON:0002616!2.10e-20!59;UBERON:0007023!1.77e-19!115;UBERON:0002384!9.33e-18!375;UBERON:0000955!1.56e-17!69;UBERON:0006238!1.56e-17!69;UBERON:0003080!5.25e-17!42;UBERON:0002780!7.18e-17!41;UBERON:0001890!7.18e-17!41;UBERON:0006240!7.18e-17!41;UBERON:0001017!1.51e-14!82;UBERON:0002020!2.29e-14!34;UBERON:0003528!2.29e-14!34;UBERON:0001893!2.45e-14!34;UBERON:0002371!5.98e-14!80;UBERON:0002791!9.08e-14!33;UBERON:0002390!1.24e-13!102;UBERON:0003061!1.24e-13!102;UBERON:0005743!1.80e-13!86;UBERON:0001869!4.65e-13!32;UBERON:0001474!7.10e-13!86;UBERON:0004765!1.19e-12!101;UBERON:0001434!1.19e-12!101;UBERON:0000073!2.14e-12!94;UBERON:0001016!2.14e-12!94;UBERON:0003075!4.35e-12!86;UBERON:0007284!4.35e-12!86;UBERON:0002193!4.61e-12!112;UBERON:0002619!4.08e-11!22;UBERON:0002346!1.04e-10!90;UBERON:0001950!4.89e-10!20;UBERON:0002405!6.38e-10!115;UBERON:0000956!2.98e-09!25;UBERON:0000203!2.98e-09!25;UBERON:0003056!3.95e-09!61;UBERON:0002204!1.38e-08!167;UBERON:0000033!1.91e-08!123;UBERON:0000153!1.93e-08!129;UBERON:0007811!1.93e-08!129;UBERON:0000479!2.09e-07!787;UBERON:0003076!3.64e-07!15;UBERON:0003057!3.64e-07!15;UBERON:0002308!5.84e-07!9;UBERON:0000125!5.84e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!6.00e-23!57;UBERON:0005068!6.00e-23!57;UBERON:0006241!6.00e-23!57;UBERON:0007135!6.00e-23!57;UBERON:0002616!2.10e-20!59;UBERON:0007023!1.77e-19!115;UBERON:0002384!9.33e-18!375;UBERON:0000955!1.56e-17!69;UBERON:0006238!1.56e-17!69;UBERON:0003080!5.25e-17!42;UBERON:0002780!7.18e-17!41;UBERON:0001890!7.18e-17!41;UBERON:0006240!7.18e-17!41;UBERON:0001017!1.51e-14!82;UBERON:0002020!2.29e-14!34;UBERON:0003528!2.29e-14!34;UBERON:0001893!2.45e-14!34;UBERON:0002371!5.98e-14!80;UBERON:0002791!9.08e-14!33;UBERON:0002390!1.24e-13!102;UBERON:0003061!1.24e-13!102;UBERON:0005743!1.80e-13!86;UBERON:0001869!4.65e-13!32;UBERON:0001474!7.10e-13!86;UBERON:0004765!1.19e-12!101;UBERON:0001434!1.19e-12!101;UBERON:0000073!2.14e-12!94;UBERON:0001016!2.14e-12!94;UBERON:0003075!4.35e-12!86;UBERON:0007284!4.35e-12!86;UBERON:0002193!4.61e-12!112;UBERON:0002619!4.08e-11!22;UBERON:0002346!1.04e-10!90;UBERON:0001950!4.89e-10!20;UBERON:0002405!6.38e-10!115;UBERON:0000956!2.98e-09!25;UBERON:0000203!2.98e-09!25;UBERON:0003056!3.95e-09!61;UBERON:0002204!1.38e-08!167;UBERON:0000033!1.91e-08!123;UBERON:0000153!1.93e-08!129;UBERON:0007811!1.93e-08!129;UBERON:0000479!2.09e-07!787;UBERON:0003076!3.64e-07!15;UBERON:0003057!3.64e-07!15;UBERON:0002308!5.84e-07!9;UBERON:0000125!5.84e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.54e-12;53!UBERON:0002616;2.54e-12;53!UBERON:0001893;2.98e-12;34!UBERON:0002780;3.47e-12;41!UBERON:0001890;3.47e-12;41!UBERON:0003528;4.38e-12;34!UBERON:0002020;4.38e-12;34!UBERON:0002791;9.82e-12;32!UBERON:0001869;1.08e-11;32!UBERON:0002619;4.28e-11;22!UBERON:0001950;5.16e-10;20!UBERON:0000956;3.18e-09;25!UBERON:0000203;3.18e-09;25!UBERON:0001017;3.04e-08;75!UBERON:0000955;3.04e-08;68!UBERON:0000125;5.77e-07;9!UBERON:0002308;5.77e-07;9 | |||
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79376 | ||
|short_description=p1@PXK | |short_description=p1@PXK | ||
}} | }} |
Latest revision as of 05:31, 19 September 2015
Short description: | p1@PXK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PXK_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000302779, ENST00000356151, ENST00000383715, ENST00000383716, ENST00000463280, ENST00000468776, ENST00000479241, ENST00000484288, ENST00000536660, NM_017771, uc003djx.1, uc003djy.1, uc003djz.1, uc003dka.1, uc003dkb.1, uc003dkc.1, uc003dkd.1, uc010hnj.1, uc011bfe.1_5end |
EntrezGene: | PXK |
HGNC: | 23326 |
UniProt: | Q7Z7A4E9PD56F8WAW8Q32NE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 1.55e-20 | 361 |
mesenchymal cell | 8.83e-20 | 354 |
myeloid leukocyte | 8.01e-19 | 72 |
myeloid cell | 8.50e-19 | 108 |
common myeloid progenitor | 8.50e-19 | 108 |
macrophage dendritic cell progenitor | 9.70e-18 | 61 |
hematopoietic stem cell | 1.27e-17 | 168 |
monopoietic cell | 1.47e-17 | 59 |
monocyte | 1.47e-17 | 59 |
monoblast | 1.47e-17 | 59 |
promonocyte | 1.47e-17 | 59 |
granulocyte monocyte progenitor cell | 8.81e-17 | 67 |
hematopoietic oligopotent progenitor cell | 1.21e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-16 | 161 |
hematopoietic cell | 7.45e-16 | 177 |
myeloid lineage restricted progenitor cell | 1.17e-15 | 66 |
leukocyte | 1.28e-15 | 136 |
motile cell | 7.38e-15 | 386 |
defensive cell | 7.86e-15 | 48 |
phagocyte | 7.86e-15 | 48 |
multi fate stem cell | 1.13e-14 | 427 |
classical monocyte | 1.85e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.85e-14 | 42 |
nongranular leukocyte | 8.67e-14 | 115 |
somatic stem cell | 2.91e-13 | 433 |
hematopoietic lineage restricted progenitor cell | 1.17e-12 | 120 |
stem cell | 7.79e-12 | 441 |