FFCP PHASE1:Hg19::chr10:75351088..75351113,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:75351088..75351113,- to FFCP PHASE1:Hg19::chr10:75351088..75351113,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=159195 | |EntrezGene=159195 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23513 | |HGNC=23513 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000413442,ENST00000451492,ENST00000466048_5end | |||
|cluster_id=chr10:75351088..75351113,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_USP54_5end | |||
|id=chr10:75351088..75351113,- | |||
|ontology_enrichment_celltype=CL:0000066!4.52e-12!254;CL:0000147!3.12e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000147;2.56e-08;14!CL:0000148;4.94e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,2.33e-08,14;CL:0000066,1.87e-07,253;CL:0000148,4.45e-07,10;CL:0000541,4.45e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.56e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.16e-29!86;UBERON:0001049!5.35e-28!57;UBERON:0005068!5.35e-28!57;UBERON:0006241!5.35e-28!57;UBERON:0007135!5.35e-28!57;UBERON:0001017!3.84e-27!82;UBERON:0002616!1.42e-26!59;UBERON:0000073!1.66e-26!94;UBERON:0001016!1.66e-26!94;UBERON:0000955!1.91e-26!69;UBERON:0006238!1.91e-26!69;UBERON:0003075!3.20e-25!86;UBERON:0007284!3.20e-25!86;UBERON:0007023!3.02e-23!115;UBERON:0000033!3.20e-23!123;UBERON:0002346!4.02e-23!90;UBERON:0000153!2.13e-22!129;UBERON:0007811!2.13e-22!129;UBERON:0003080!3.39e-20!42;UBERON:0002780!4.41e-20!41;UBERON:0001890!4.41e-20!41;UBERON:0006240!4.41e-20!41;UBERON:0004121!4.77e-20!169;UBERON:0000924!6.32e-19!173;UBERON:0006601!6.32e-19!173;UBERON:0002020!1.64e-17!34;UBERON:0003528!1.64e-17!34;UBERON:0001893!1.73e-17!34;UBERON:0003056!2.06e-17!61;UBERON:0002791!7.76e-17!33;UBERON:0001869!4.81e-16!32;UBERON:0004111!3.40e-15!241;UBERON:0000025!1.06e-14!194;UBERON:0000062!2.33e-13!511;UBERON:0000119!2.97e-13!312;UBERON:0000483!3.56e-13!309;UBERON:0002619!1.16e-12!22;UBERON:0000956!1.29e-11!25;UBERON:0000203!1.29e-11!25;UBERON:0001950!2.01e-11!20;UBERON:0000477!2.57e-11!286;UBERON:0000475!9.88e-10!365;UBERON:0000481!1.56e-09!347;UBERON:0000064!3.41e-09!219;UBERON:0000922!4.22e-09!612;UBERON:0003076!5.94e-09!15;UBERON:0003057!5.94e-09!15;UBERON:0000467!6.63e-09!625;UBERON:0000480!9.87e-09!626;UBERON:0000468!2.60e-08!659;UBERON:0004732!1.15e-07!13;UBERON:0002308!1.21e-07!9;UBERON:0000125!1.21e-07!9;UBERON:0002050!1.41e-07!605;UBERON:0005423!1.41e-07!605;UBERON:0000923!1.58e-07!604;UBERON:0005291!1.58e-07!604;UBERON:0006598!1.58e-07!604;UBERON:0002532!1.58e-07!604;UBERON:0002420!2.01e-07!9;UBERON:0007245!2.01e-07!9;UBERON:0010009!2.01e-07!9;UBERON:0010011!2.01e-07!9;UBERON:0000454!2.01e-07!9;UBERON:0004733!5.53e-07!12;UBERON:0002028!5.53e-07!12;UBERON:0007277!5.53e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.06e-16;34!UBERON:0000073;4.91e-16;53!UBERON:0002616;4.91e-16;53!UBERON:0003528;4.96e-16;34!UBERON:0002020;4.96e-16;34!UBERON:0002780;9.36e-16;41!UBERON:0001890;9.36e-16;41!UBERON:0002791;1.61e-15;32!UBERON:0001869;1.87e-15;32!UBERON:0002619;3.17e-14;22!UBERON:0001017;8.59e-13;75!UBERON:0001950;1.30e-12;20!UBERON:0000955;2.54e-12;68!UBERON:0000956;1.31e-11;25!UBERON:0000203;1.31e-11;25!UBERON:0000125;1.22e-09;9!UBERON:0002308;1.22e-09;9!UBERON:0001016;1.58e-09;83!UBERON:0002420;2.34e-09;9!UBERON:0007245;2.34e-09;9!UBERON:0010009;2.34e-09;9!UBERON:0010011;2.34e-09;9!UBERON:0000454;2.34e-09;9!UBERON:0004732;4.69e-09;13!UBERON:0007023;2.85e-08;114!UBERON:0004733;3.67e-08;12!UBERON:0002028;3.67e-08;12!UBERON:0009663;9.37e-08;7!UBERON:0002298;3.13e-07;6!UBERON:0000200;9.16e-07;6 | |||
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| ||
|short_description=p1@USP54 | |||
}} | }} |
Latest revision as of 07:20, 19 September 2015
Short description: | p1@USP54 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_USP54_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000413442, ENST00000451492, ENST00000466048_5end |
EntrezGene: | USP54 |
HGNC: | 23513 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 2.33e-08 | 14 |
epithelial cell | 1.87e-07 | 253 |
melanocyte | 4.45e-07 | 10 |
melanoblast | 4.45e-07 | 10 |