FFCP PHASE1:Hg19::chr1:79472458..79472472,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:79472458..79472472,- to FFCP PHASE1:Hg19::chr1:79472458..79472472,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64123 | |EntrezGene=64123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20822 | |HGNC=20822 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HBW9 | |UniProt=Q9HBW9 | ||
|association_with_transcript=22bp_to_NM_022159,uc001diq.3_5end | |||
|cluster_id=chr1:79472458..79472472,- | |||
|description=CAGE_peak_3_at_ELTD1_5end | |||
|id=chr1:79472458..79472472,- | |||
|ontology_enrichment_celltype=CL:0000055!6.73e-26!180;CL:0000680!7.00e-24!57;CL:0000056!7.00e-24!57;CL:0000355!7.00e-24!57;CL:0000187!7.59e-22!54;CL:0000359!5.54e-21!32;CL:0000222!3.98e-20!119;CL:0000183!1.36e-19!59;CL:0000393!9.55e-18!60;CL:0000211!9.55e-18!60;CL:0000192!1.67e-17!42;CL:0000514!1.67e-17!42;CL:0002139!1.04e-14!24;CL:0000057!4.15e-13!75;CL:0000071!1.00e-12!18;CL:0002546!1.00e-12!18;CL:0002494!1.34e-10!16;CL:0002539!1.23e-09!10;CL:0000115!7.15e-09!35;CL:1000413!5.83e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.60e-25;32!CL:0002139;1.87e-18;24!CL:0000071;2.53e-16;18!CL:0002539;1.02e-14;10!CL:0002494;1.32e-13;16!CL:0000192;3.58e-13;43!CL:0000187;4.21e-12;55!CL:1000413;1.01e-11;9!CL:0000115;4.24e-11;36!CL:0000393;2.62e-09;61!CL:0000211;2.62e-09;61!CL:0002544;7.20e-08;6!CL:0002543;9.26e-08;6!CL:0000569;1.89e-07;4!CL:0002570;3.71e-07;8!CL:0000134;7.64e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.08e-26,32;CL:0000222,1.49e-25,121;CL:0000680,1.99e-24,58;CL:0000056,1.99e-24,58;CL:0000355,1.99e-24,58;CL:0000187,1.54e-21,55;CL:0002139,9.84e-19,24;CL:0000393,2.69e-18,61;CL:0000211,2.69e-18,61;CL:0000192,1.74e-17,43;CL:0000514,1.74e-17,43;CL:0000071,1.46e-16,18;CL:0002546,1.46e-16,18;CL:0002539,1.20e-14,10;CL:0002494,1.18e-13,16;CL:0000115,6.28e-13,36;CL:1000413,6.16e-12,9;CL:0002321,3.85e-11,250;CL:0000048,1.91e-09,427;CL:0002078,4.66e-09,45;CL:0000723,5.93e-09,433;CL:0000034,2.51e-08,441;CL:0002544,4.74e-08,6;CL:0002543,6.92e-08,6;CL:0000569,1.74e-07,4;CL:0000011,1.74e-07,4;CL:0002570,3.61e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002546;2.53e-16;18!CL:0000355;2.61e-13;58!CL:0000514;3.58e-13;43!CL:0000011;1.89e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!7.83e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.29e-43!84;UBERON:0002049!8.23e-39!79;UBERON:0007798!8.23e-39!79;UBERON:0001981!3.00e-36!60;UBERON:0007500!3.00e-36!60;UBERON:0004537!3.00e-36!60;UBERON:0006965!3.00e-36!60;UBERON:0004535!3.48e-36!110;UBERON:0001009!5.13e-36!113;UBERON:0000055!1.41e-35!69;UBERON:0001637!7.79e-31!42;UBERON:0003509!7.79e-31!42;UBERON:0004572!7.79e-31!42;UBERON:0004290!9.71e-29!70;UBERON:0003914!9.76e-28!118;UBERON:0000914!1.68e-25!83;UBERON:0002329!1.68e-25!83;UBERON:0003077!1.68e-25!83;UBERON:0003059!1.68e-25!83;UBERON:0007282!1.68e-25!83;UBERON:0009618!1.68e-25!83;UBERON:0007285!1.68e-25!83;UBERON:0002385!4.09e-25!63;UBERON:0001015!4.09e-25!63;UBERON:0000383!4.09e-25!63;UBERON:0001134!1.42e-24!61;UBERON:0002036!1.42e-24!61;UBERON:0003082!1.42e-24!61;UBERON:0004573!5.28e-24!33;UBERON:0004571!5.28e-24!33;UBERON:0000486!1.51e-21!82;UBERON:0000490!9.17e-21!138;UBERON:0000119!9.61e-18!312;UBERON:0000483!6.94e-17!309;UBERON:0000477!3.74e-16!286;UBERON:0000947!3.86e-16!21;UBERON:0010191!3.86e-16!21;UBERON:0005256!5.18e-16!143;UBERON:0004111!3.00e-15!241;UBERON:0000025!2.16e-14!194;UBERON:0000948!5.94e-14!24;UBERON:0005498!5.94e-14!24;UBERON:0004140!5.94e-14!24;UBERON:0009881!5.94e-14!24;UBERON:0004141!5.94e-14!24;UBERON:0003084!5.94e-14!24;UBERON:0007005!5.94e-14!24;UBERON:0004139!5.94e-14!24;UBERON:0004291!5.94e-14!24;UBERON:0007100!2.52e-13!27;UBERON:0001986!1.00e-12!18;UBERON:0004638!1.00e-12!18;UBERON:0004852!1.00e-12!18;UBERON:0002100!2.53e-11!216;UBERON:0000487!2.29e-10!22;UBERON:0000475!3.26e-10!365;UBERON:0000481!5.48e-10!347;UBERON:0000468!6.32e-10!659;UBERON:0004237!1.23e-09!10;UBERON:0004695!1.23e-09!10;UBERON:0002111!1.23e-09!10;UBERON:0004178!1.23e-09!10;UBERON:0000926!3.84e-09!448;UBERON:0004120!3.84e-09!448;UBERON:0006603!3.84e-09!448;UBERON:0001135!4.26e-09!15;UBERON:0000467!4.78e-09!625;UBERON:0000480!6.29e-09!626;UBERON:0006914!3.00e-08!25;UBERON:0003104!5.45e-08!238;UBERON:0009142!5.45e-08!238;UBERON:0003915!5.83e-08!9;UBERON:0004700!5.83e-08!9;UBERON:0001917!5.83e-08!9;UBERON:0003081!8.20e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.66e-34;42!UBERON:0003509;6.66e-34;42!UBERON:0004572;6.66e-34;42!UBERON:0004573;7.59e-33;33!UBERON:0004571;7.59e-33;33!UBERON:0000947;7.92e-25;21!UBERON:0010191;7.92e-25;21!UBERON:0007500;7.49e-24;56!UBERON:0001981;7.49e-24;56!UBERON:0004537;7.49e-24;56!UBERON:0000055;6.67e-22;65!UBERON:0002049;4.13e-19;75!UBERON:0007798;4.13e-19;75!UBERON:0002385;5.20e-17;31!UBERON:0001015;5.20e-17;31!UBERON:0000383;5.20e-17;31!UBERON:0004638;2.53e-16;18!UBERON:0001986;2.53e-16;18!UBERON:0004852;2.53e-16;18!UBERON:0004237;1.02e-14;10!UBERON:0004695;1.02e-14;10!UBERON:0002111;1.02e-14;10!UBERON:0004178;1.02e-14;10!UBERON:0003914;1.50e-14;74!UBERON:0000487;4.82e-14;22!UBERON:0000948;8.96e-14;22!UBERON:0004535;2.17e-12;109!UBERON:0006914;9.49e-12;25!UBERON:0003915;1.01e-11;9!UBERON:0004700;1.01e-11;9!UBERON:0001917;1.01e-11;9!UBERON:0007100;1.61e-11;25!UBERON:0001009;4.34e-11;112!UBERON:0001134;3.29e-10;16!UBERON:0002036;3.29e-10;16!UBERON:0001135;7.74e-09;15!UBERON:0000025;2.33e-08;93!UBERON:0000490;4.00e-08;33!UBERON:0010260;8.87e-07;9 | |||
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| ||
|short_description=p3@ELTD1 | |||
}} | }} |
Latest revision as of 09:00, 19 September 2015
Short description: | p3@ELTD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ELTD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_NM_022159, uc001diq.3_5end |
EntrezGene: | ELTD1 |
HGNC: | 20822 |
UniProt: | Q9HBW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.08e-26 | 32 |
mesodermal cell | 1.49e-25 | 121 |
muscle precursor cell | 1.99e-24 | 58 |
myoblast | 1.99e-24 | 58 |
multi-potent skeletal muscle stem cell | 1.99e-24 | 58 |
muscle cell | 1.54e-21 | 55 |
endothelial cell of vascular tree | 9.84e-19 | 24 |
electrically responsive cell | 2.69e-18 | 61 |
electrically active cell | 2.69e-18 | 61 |
smooth muscle cell | 1.74e-17 | 43 |
smooth muscle myoblast | 1.74e-17 | 43 |
blood vessel endothelial cell | 1.46e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.46e-16 | 18 |
aortic smooth muscle cell | 1.20e-14 | 10 |
cardiocyte | 1.18e-13 | 16 |
endothelial cell | 6.28e-13 | 36 |
endothelial cell of artery | 6.16e-12 | 9 |
embryonic cell | 3.85e-11 | 250 |
multi fate stem cell | 1.91e-09 | 427 |
meso-epithelial cell | 4.66e-09 | 45 |
somatic stem cell | 5.93e-09 | 433 |
stem cell | 2.51e-08 | 441 |
aortic endothelial cell | 4.74e-08 | 6 |
vein endothelial cell | 6.92e-08 | 6 |
cardiac mesenchymal cell | 1.74e-07 | 4 |
migratory trunk neural crest cell | 1.74e-07 | 4 |
mesenchymal stem cell of adipose | 3.61e-07 | 8 |