FFCP PHASE1:Hg19::chr19:51071705..51071732,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94030 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25042 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NT99,F5GYR9 | |||
|association_with_transcript=-403bp_to_ENST00000389201,ENST00000535879,NM_001080457,uc002pss.2_5end | |||
|cluster_id=chr19:51071705..51071732,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_LRRC4B_5end | |||
|id=chr19:51071705..51071732,- | |||
|ontology_enrichment_celltype=CL:0000047!4.76e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.51e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.97e-08,8;CL:0002322,5.32e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.38e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.14e-43!82;UBERON:0005743!4.77e-43!86;UBERON:0000073!6.16e-42!94;UBERON:0001016!6.16e-42!94;UBERON:0001049!3.72e-39!57;UBERON:0005068!3.72e-39!57;UBERON:0006241!3.72e-39!57;UBERON:0007135!3.72e-39!57;UBERON:0002346!6.53e-37!90;UBERON:0007023!1.28e-34!115;UBERON:0003075!5.33e-34!86;UBERON:0007284!5.33e-34!86;UBERON:0000955!7.42e-34!69;UBERON:0006238!7.42e-34!69;UBERON:0002780!1.49e-32!41;UBERON:0001890!1.49e-32!41;UBERON:0006240!1.49e-32!41;UBERON:0002616!2.16e-32!59;UBERON:0003080!2.10e-31!42;UBERON:0002020!1.07e-29!34;UBERON:0003528!1.07e-29!34;UBERON:0001893!1.39e-29!34;UBERON:0001869!9.16e-29!32;UBERON:0002791!1.24e-28!33;UBERON:0000924!1.89e-26!173;UBERON:0006601!1.89e-26!173;UBERON:0002619!2.62e-24!22;UBERON:0004121!3.63e-24!169;UBERON:0003056!4.68e-24!61;UBERON:0000956!1.05e-23!25;UBERON:0000203!1.05e-23!25;UBERON:0001950!2.08e-22!20;UBERON:0000153!4.16e-21!129;UBERON:0007811!4.16e-21!129;UBERON:0000033!6.38e-21!123;UBERON:0000025!6.52e-12!194;UBERON:0000481!2.42e-11!347;UBERON:0000922!2.58e-11!612;UBERON:0001871!1.03e-09!7;UBERON:0004111!1.26e-09!241;UBERON:0003076!6.80e-09!15;UBERON:0003057!6.80e-09!15;UBERON:0002050!1.10e-08!605;UBERON:0005423!1.10e-08!605;UBERON:0000923!2.81e-08!604;UBERON:0005291!2.81e-08!604;UBERON:0006598!2.81e-08!604;UBERON:0002532!2.81e-08!604;UBERON:0000483!2.91e-08!309;UBERON:0000119!2.92e-08!312;UBERON:0000064!6.42e-08!219;UBERON:0002420!7.02e-08!9;UBERON:0007245!7.02e-08!9;UBERON:0010009!7.02e-08!9;UBERON:0010011!7.02e-08!9;UBERON:0000454!7.02e-08!9;UBERON:0000477!9.69e-08!286;UBERON:0000475!1.40e-07!365;UBERON:0000200!1.79e-07!6;UBERON:0002308!1.80e-07!9;UBERON:0000125!1.80e-07!9;UBERON:0000468!2.00e-07!659;UBERON:0004733!4.01e-07!12;UBERON:0002028!4.01e-07!12;UBERON:0007277!4.01e-07!12;UBERON:0000062!5.41e-07!511;UBERON:0002680!8.03e-07!9;UBERON:0001895!8.03e-07!9;UBERON:0010092!8.03e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.23e-35;22!UBERON:0001869;3.26e-34;32!UBERON:0000956;8.94e-33;25!UBERON:0000203;8.94e-33;25!UBERON:0001950;1.51e-32;20!UBERON:0003528;1.64e-32;34!UBERON:0002020;1.64e-32;34!UBERON:0002791;5.94e-32;32!UBERON:0001893;7.23e-31;34!UBERON:0002780;2.41e-28;41!UBERON:0001890;2.41e-28;41!UBERON:0000073;8.49e-28;53!UBERON:0002616;8.49e-28;53!UBERON:0000922;1.47e-21;49!UBERON:0000955;1.64e-20;68!UBERON:0001017;9.34e-20;75!UBERON:0001016;1.34e-19;83!UBERON:0001871;4.07e-12;6!UBERON:0000200;2.31e-10;6!UBERON:0004733;2.68e-10;12!UBERON:0002028;2.68e-10;12!UBERON:0002680;1.18e-09;9!UBERON:0001895;1.18e-09;9!UBERON:0004732;2.50e-09;13!UBERON:0001872;6.22e-09;5!UBERON:0002021;7.60e-09;5!UBERON:0000349;1.04e-08;5!UBERON:0002420;1.91e-07;9!UBERON:0007245;1.91e-07;9!UBERON:0010009;1.91e-07;9!UBERON:0010011;1.91e-07;9!UBERON:0000454;1.91e-07;9!UBERON:0011216;2.81e-07;132!UBERON:0000125;6.45e-07;9!UBERON:0002308;6.45e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.17e-58,81;UBERON:0001016,8.61e-55,89;UBERON:0001049,6.75e-51,56;UBERON:0005068,6.75e-51,56;UBERON:0006241,6.75e-51,56;UBERON:0007135,6.75e-51,56;UBERON:0000073,8.81e-50,53;UBERON:0002616,8.81e-50,53;UBERON:0000955,1.07e-47,68;UBERON:0006238,1.07e-47,68;UBERON:0002780,1.86e-40,41;UBERON:0001890,1.86e-40,41;UBERON:0003080,1.86e-40,41;UBERON:0006240,1.86e-40,41;UBERON:0002346,1.92e-40,86;UBERON:0001869,2.63e-38,32;UBERON:0003528,7.87e-38,34;UBERON:0002020,7.87e-38,34;UBERON:0003075,1.00e-37,82;UBERON:0007284,1.00e-37,82;UBERON:0002619,1.58e-35,22;UBERON:0001893,1.67e-35,34;UBERON:0002791,1.82e-35,32;UBERON:0000956,6.18e-33,25;UBERON:0000203,6.18e-33,25;UBERON:0001950,1.11e-32,20;UBERON:0003056,1.93e-31,61;UBERON:0004121,1.82e-30,171;UBERON:0000924,1.82e-30,171;UBERON:0006601,1.82e-30,171;UBERON:0010371,2.26e-30,104;UBERON:0010314,2.49e-26,132;UBERON:0011216,4.99e-24,223;UBERON:0007023,1.68e-20,114;UBERON:0001871,3.40e-12,6;UBERON:0003076,2.04e-11,15;UBERON:0003057,2.04e-11,15;UBERON:0000200,2.21e-10,6;UBERON:0004733,2.48e-10,12;UBERON:0002028,2.48e-10,12;UBERON:0007277,2.48e-10,12;UBERON:0000025,2.67e-10,192;UBERON:0000922,5.05e-10,592;UBERON:0002680,1.12e-09,9;UBERON:0001895,1.12e-09,9;UBERON:0010092,1.12e-09,9;UBERON:0004732,2.33e-09,13;UBERON:0001872,6.36e-09,5;UBERON:0002021,6.46e-09,5;UBERON:0000349,9.79e-09,5;UBERON:0002420,2.06e-07,9;UBERON:0007245,2.06e-07,9;UBERON:0010009,2.06e-07,9;UBERON:0010011,2.06e-07,9;UBERON:0000454,2.06e-07,9;UBERON:0000125,6.25e-07,9;UBERON:0002308,6.25e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,1.60057375499824,0,2.19418305034661,1.43117993565528,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0.175669571386252,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1349799145941,0.24666754841716,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0.413303124703062,0,0,0,0,0,0.250237039743928,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31750041646231,2.25300606146525,2.20768491452085,4.66474747569167,1.26160425437814,4.01475094983413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.2347220339942,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,2.89826012437692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444485260045183,0.381988425558278,0,0,0,0,0.857479297891735,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.83742380354924,3.48613383440118,3.39908170018994,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04913549066956,1.30139853857622,1.54657762555539,5.69555302136786,4.46557126157214,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.770153371044148,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,1.28225062558195,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.170453254832202,0.267096106940212,0,0,0,0.10115778085555,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,2.45695363593188,0,0.245040215981032,0,0,0,0,0,0.5745161103971,0,0,0,0,0,12.5317238545034,0,0,0,0,0,0.921722292925374,0.894704431569664,0.333698283423817,0,0,1.23087398947712,0,0,0,0,0,1.45632626099416,0,0,0,0,0,6.95903353436409,7.59614848616769,0,0,0,0.398495976502139,0.828851746593443,0,0,0,0,0,0,0,0.394573622547734,0,0,5.81599647657131,4.54563680993071,43.9150355602627,0,0,0,0,0,0,0,0.291604613383254,0,1.77148277162768,2.05013945663194,3.05163472634166,6.19243855614858,9.45752380651352,6.58156191461918,0,0,8.69537921092907,0,0,0,0,0,0.183195186803725,0,0,0,0,0.676786981851542,1.37243774022418,0.503464760927528,0.37950746544837,0,0,0,0.141353071433941,0,1.99052386215701,0.353830258013357,1.22206028986725,0,0,0,0.943615861729479,2.40773294189637,1.87411556580271,0,0,0,0.394584402849391,4.83962864194656,15.609710843155,1.0741718536843,0,1.03688191397247,1.32930774541437,1.65495977937749,0.313932918407225,1.19472429772959,1.13843818411917,6.37903495860438,0,0,0,0.52418000472609,0,0,0,0,0.387956065953678,4.50106246126651,5.64951851951331,0,0,6.96418755514666,4.88878456837007,0,0.213452994739353,1.19885765749278,0,0.572682980829578,0,0,2.48505071130865,0,8.15425236441684,9.20505047548532,0,0,0.600420288709789,1.09524303113594,0,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0,1.67958681216816,0,0,0,0,0,0,0,5.56660782866512,6.81017030557878,0.321506296930038,1.2378549293751,2.9080823662043,0,0,8.26193970549135,0,0.157611414598396,6.29455057619977,6.23041985464498,0,0,1.42939065274673,0,0,0,0,0,1.19730191562487,0.246277562248017,0,0.566560457600628,0,0,2.84422503995411,2.51241943311111,0.513260513652988,0,0.213574825135389,2.04365596629566,0.414239055347196,0,0,0,0,0,0,0,0,0,5.31640907980192,8.78589107294135,8.01221956521599,0,1.10929051536852,1.92498849118289,0,0,1.21319294033318,6.85116800507922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0.265841714557995,0,1.6528336989694,0,0,0,0.322231671127465,0,0,0,0,0,0,0,3.00218227924896,1.04397716786085,0,0,0,0,3.39681591877069,0,0,0,0,3.8436227788192,0,0,7.18943867989,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,2.42999305476938,0,0.943595651135378,0.218419276384028,0.33946505990805,6.1646726829488,2.47871528518004,8.37967376959866,0,0,0,0.705351887381368,0,5.13833800771676,2.8339315265117,6.70462208040035,7.17907274842643,27.2237431919456,8.57549930556302,7.75083099032885,0,0,0.11796972334774,0,0,0,0,0,1.80504788038217,0,0,0,0,0,5.94330744641873,6.24862478891078,6.61397748803789,5.5805912970638,20.2380679336741,0,0.496211178389294,3.69329613155203,0,0,1.00885116665647,1.82089681270989,4.09791944432336,0.709618961301111,0,0,2.24300118823545,6.70882290341061,0,0,0.470958557103084,3.92788974790005,0,9.13158720509496,0,0,2.64463213453628,3.47629945811999,0,0.173858272302579,0,0,0,0,0.860454717640555,0,0,0.423387050190929,0,0,0,2.01339777236026,0,0,0,0.307988420568741,10.4383298820438,5.82853191670967,0,9.74858798290704,2.97300226943921,0,0,0,0.463044948647668,2.18559560503957,0,0,0,2.1593931382644,0.297046400327086,2.5359343655004,0,0.0939839179798536,2.2560260790752,0,0,0,0,0,0.458729283404541,0.286679166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| |||
|short_description=p2@LRRC4B | |||
}} |
Latest revision as of 12:15, 19 September 2015
Short description: | p2@LRRC4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRRC4B_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -403bp_to_ENST00000389201, ENST00000535879, NM_001080457, uc002pss.2_5end |
EntrezGene: | LRRC4B |
HGNC: | 25042 |
UniProt: | Q9NT99F5GYR9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.97e-08 | 8 |
embryonic stem cell | 5.32e-07 | 5 |