FFCP PHASE1:Hg19::chr17:33416231..33416308,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=117584 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24821 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WZ73 | |||
|association_with_transcript=0bp_to_uc002hio.1,uc002hip.1_5end | |||
|cluster_id=chr17:33416231..33416308,- | |||
|description=CAGE_peak_1_at_RFFL_5end | |||
|id=chr17:33416231..33416308,- | |||
|ontology_enrichment_celltype=CL:0000738!1.93e-21!140;CL:0002087!4.94e-20!119;CL:0002031!4.37e-19!124;CL:0002057!1.50e-16!42;CL:0000988!6.48e-16!182;CL:0000037!1.36e-15!172;CL:0000566!1.36e-15!172;CL:0002032!1.79e-15!165;CL:0000837!1.79e-15!165;CL:0000766!5.40e-14!76;CL:0000860!9.62e-14!45;CL:0000839!2.37e-11!70;CL:0002194!1.42e-10!63;CL:0000576!1.42e-10!63;CL:0000040!1.42e-10!63;CL:0000559!1.42e-10!63;CL:0000557!3.37e-10!71;CL:0000791!8.72e-10!18;CL:0000789!8.72e-10!18;CL:0002420!8.72e-10!18;CL:0002419!8.72e-10!18;CL:0000790!8.72e-10!18;CL:0002009!1.18e-09!65;CL:0000838!3.60e-09!52;CL:0000542!6.08e-09!53;CL:0000051!6.08e-09!53;CL:0000763!1.26e-07!112;CL:0000049!1.26e-07!112;CL:0000084!4.15e-07!25;CL:0000827!4.15e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.30e-16;33!CL:0002057;6.30e-16;33!CL:0000473;6.04e-12;39!CL:0000234;6.04e-12;39!CL:0000791;7.51e-10;18!CL:0000789;7.51e-10;18!CL:0002419;7.51e-10;18!CL:0000576;8.47e-10;48!CL:0002087;2.06e-08;104!CL:0000766;1.25e-07;69!CL:0000084;3.76e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.15e-24,136;CL:0002087,1.71e-22,115;CL:0002031,2.08e-21,120;CL:0000988,1.28e-17,177;CL:0000037,2.60e-17,168;CL:0002032,3.17e-17,161;CL:0000837,3.17e-17,161;CL:0000766,1.48e-16,72;CL:0000860,1.49e-16,42;CL:0002057,1.49e-16,42;CL:0000473,6.01e-15,48;CL:0000234,6.01e-15,48;CL:0000839,1.06e-13,66;CL:0002194,5.68e-13,59;CL:0000576,5.68e-13,59;CL:0000040,5.68e-13,59;CL:0000559,5.68e-13,59;CL:0000557,2.32e-12,67;CL:0002009,7.35e-12,61;CL:0000791,8.71e-10,18;CL:0000789,8.71e-10,18;CL:0002420,8.71e-10,18;CL:0002419,8.71e-10,18;CL:0000790,8.71e-10,18;CL:0000838,3.39e-09,52;CL:0000763,5.41e-09,108;CL:0000049,5.41e-09,108;CL:0000542,5.73e-09,53;CL:0000051,5.73e-09,53;CL:0000084,3.86e-07,25;CL:0000827,3.86e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;1.85e-12;42!CL:0000790;7.51e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.84e-20!115;UBERON:0002390!1.10e-15!102;UBERON:0003061!1.10e-15!102;UBERON:0002193!3.79e-14!112;UBERON:0001049!1.88e-12!57;UBERON:0005068!1.88e-12!57;UBERON:0006241!1.88e-12!57;UBERON:0007135!1.88e-12!57;UBERON:0005743!3.60e-12!86;UBERON:0001017!9.77e-12!82;UBERON:0003075!1.31e-11!86;UBERON:0007284!1.31e-11!86;UBERON:0002616!1.44e-11!59;UBERON:0002020!1.61e-10!34;UBERON:0003528!1.61e-10!34;UBERON:0001893!1.63e-10!34;UBERON:0003056!2.49e-10!61;UBERON:0000073!3.11e-10!94;UBERON:0001016!3.11e-10!94;UBERON:0002405!3.62e-10!115;UBERON:0003080!4.09e-10!42;UBERON:0002791!4.90e-10!33;UBERON:0002780!4.93e-10!41;UBERON:0001890!4.93e-10!41;UBERON:0006240!4.93e-10!41;UBERON:0000955!1.18e-09!69;UBERON:0006238!1.18e-09!69;UBERON:0002371!1.81e-09!80;UBERON:0001869!2.30e-09!32;UBERON:0002346!2.80e-09!90;UBERON:0001474!2.30e-07!86;UBERON:0000153!2.94e-07!129;UBERON:0007811!2.94e-07!129;UBERON:0000956!4.98e-07!25;UBERON:0000203!4.98e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.00e-09;34!UBERON:0003528;7.25e-09;34!UBERON:0002020;7.25e-09;34!UBERON:0002791;1.44e-08;32!UBERON:0001869;1.68e-08;32!UBERON:0002780;8.69e-08;41!UBERON:0001890;8.69e-08;41!UBERON:0000956;5.11e-07;25!UBERON:0000203;5.11e-07;25!UBERON:0000073;6.01e-07;53!UBERON:0002616;6.01e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.22e-20,114;UBERON:0002390,5.71e-18,98;UBERON:0003061,5.71e-18,98;UBERON:0002193,3.69e-16,108;UBERON:0003075,1.38e-12,82;UBERON:0007284,1.38e-12,82;UBERON:0001049,2.30e-12,56;UBERON:0005068,2.30e-12,56;UBERON:0006241,2.30e-12,56;UBERON:0007135,2.30e-12,56;UBERON:0002405,6.60e-12,93;UBERON:0001017,1.30e-11,81;UBERON:0002371,2.26e-11,76;UBERON:0000073,6.19e-11,53;UBERON:0002616,6.19e-11,53;UBERON:0003056,1.02e-10,61;UBERON:0003528,1.61e-10,34;UBERON:0002020,1.61e-10,34;UBERON:0001893,1.63e-10,34;UBERON:0002346,4.55e-10,86;UBERON:0002780,4.92e-10,41;UBERON:0001890,4.92e-10,41;UBERON:0003080,4.92e-10,41;UBERON:0006240,4.92e-10,41;UBERON:0001016,1.08e-09,89;UBERON:0000955,1.55e-09,68;UBERON:0006238,1.55e-09,68;UBERON:0002791,1.87e-09,32;UBERON:0001869,2.30e-09,32;UBERON:0001474,6.76e-09,82;UBERON:0004765,9.25e-08,90;UBERON:0000956,4.97e-07,25;UBERON:0000203,4.97e-07,25;UBERON:0010371,7.72e-07,104 | |||
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| |||
|short_description=p1@RFFL | |||
}} |
Latest revision as of 14:21, 19 September 2015
Short description: | p1@RFFL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RFFL_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002hio.1, uc002hip.1_5end |
EntrezGene: | RFFL |
HGNC: | 24821 |
UniProt: | Q8WZ73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.22e-20 | 114 |
hematopoietic system | 5.71e-18 | 98 |
blood island | 5.71e-18 | 98 |
hemolymphoid system | 3.69e-16 | 108 |
neural plate | 1.38e-12 | 82 |
presumptive neural plate | 1.38e-12 | 82 |
neural tube | 2.30e-12 | 56 |
neural rod | 2.30e-12 | 56 |
future spinal cord | 2.30e-12 | 56 |
neural keel | 2.30e-12 | 56 |
immune system | 6.60e-12 | 93 |
central nervous system | 1.30e-11 | 81 |
bone marrow | 2.26e-11 | 76 |
regional part of nervous system | 6.19e-11 | 53 |
regional part of brain | 6.19e-11 | 53 |
pre-chordal neural plate | 1.02e-10 | 61 |
brain grey matter | 1.61e-10 | 34 |
gray matter | 1.61e-10 | 34 |
telencephalon | 1.63e-10 | 34 |
neurectoderm | 4.55e-10 | 86 |
regional part of forebrain | 4.92e-10 | 41 |
forebrain | 4.92e-10 | 41 |
anterior neural tube | 4.92e-10 | 41 |
future forebrain | 4.92e-10 | 41 |
nervous system | 1.08e-09 | 89 |
brain | 1.55e-09 | 68 |
future brain | 1.55e-09 | 68 |
regional part of telencephalon | 1.87e-09 | 32 |
cerebral hemisphere | 2.30e-09 | 32 |
bone element | 6.76e-09 | 82 |
skeletal element | 9.25e-08 | 90 |
cerebral cortex | 4.97e-07 | 25 |
pallium | 4.97e-07 | 25 |
ecto-epithelium | 7.72e-07 | 104 |