FFCP PHASE1:Hg19::chr3:76359866..76359898,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:76359866..76359898,+
|short_description=p5@ROBO2
|description=CAGE_peak_5_at_ROBO2_5end
|association_with_transcript=-348bp_to_ENST00000475034_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6092 | |EntrezGene=6092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10250 | |HGNC=10250 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-348bp_to_ENST00000475034_5end | |||
|cluster_id=chr3:76359866..76359898,+ | |||
|coexpression_cluster_id=C4345 | |||
|description=CAGE_peak_5_at_ROBO2_5end | |||
|id=chr3:76359866..76359898,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;8.61e-10;2!CL:0000242;8.61e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,7.73e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.15e-15;82!UBERON:0010122;9.82e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.34e-58!57;UBERON:0005068!3.34e-58!57;UBERON:0006241!3.34e-58!57;UBERON:0007135!3.34e-58!57;UBERON:0002780!7.24e-54!41;UBERON:0001890!7.24e-54!41;UBERON:0006240!7.24e-54!41;UBERON:0003080!2.57e-52!42;UBERON:0001017!6.04e-52!82;UBERON:0005743!5.96e-51!86;UBERON:0002616!2.08e-50!59;UBERON:0000955!1.55e-49!69;UBERON:0006238!1.55e-49!69;UBERON:0001869!2.18e-46!32;UBERON:0001893!4.92e-46!34;UBERON:0002020!6.92e-46!34;UBERON:0003528!6.92e-46!34;UBERON:0000073!1.40e-44!94;UBERON:0001016!1.40e-44!94;UBERON:0002791!2.70e-44!33;UBERON:0003075!1.03e-42!86;UBERON:0007284!1.03e-42!86;UBERON:0002346!4.07e-40!90;UBERON:0003056!1.94e-38!61;UBERON:0002619!6.66e-37!22;UBERON:0007023!5.24e-36!115;UBERON:0000956!1.68e-34!25;UBERON:0000203!1.68e-34!25;UBERON:0001950!7.24e-34!20;UBERON:0000033!1.27e-32!123;UBERON:0000153!1.28e-31!129;UBERON:0007811!1.28e-31!129;UBERON:0004121!4.20e-27!169;UBERON:0000924!4.64e-26!173;UBERON:0006601!4.64e-26!173;UBERON:0000475!5.72e-16!365;UBERON:0002420!4.27e-13!9;UBERON:0007245!4.27e-13!9;UBERON:0010009!4.27e-13!9;UBERON:0010011!4.27e-13!9;UBERON:0000454!4.27e-13!9;UBERON:0000025!1.01e-12!194;UBERON:0002308!1.24e-12!9;UBERON:0000125!1.24e-12!9;UBERON:0000200!9.32e-12!6;UBERON:0001871!2.68e-11!7;UBERON:0004111!1.00e-10!241;UBERON:0001872!2.22e-10!5;UBERON:0002021!3.49e-10!5;UBERON:0009663!7.56e-10!7;UBERON:0000349!1.05e-09!5;UBERON:0000477!3.77e-09!286;UBERON:0001894!4.44e-09!7;UBERON:0006222!4.44e-09!7;UBERON:0000483!1.40e-08!309;UBERON:0000369!1.47e-08!4;UBERON:0002435!1.47e-08!4;UBERON:0000204!1.47e-08!4;UBERON:0010082!1.47e-08!4;UBERON:0003076!2.18e-08!15;UBERON:0003057!2.18e-08!15;UBERON:0000119!2.39e-08!312;UBERON:0002298!6.94e-08!8;UBERON:0005383!8.68e-07!3;UBERON:0005382!8.68e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.76e-60;32!UBERON:0001950;2.63e-56;20!UBERON:0002791;2.98e-55;32!UBERON:0001893;2.73e-54;34!UBERON:0003528;3.92e-54;34!UBERON:0002020;3.92e-54;34!UBERON:0002619;4.71e-51;22!UBERON:0002780;3.14e-45;41!UBERON:0001890;3.14e-45;41!UBERON:0000956;1.09e-44;25!UBERON:0000203;1.09e-44;25!UBERON:0000073;8.94e-35;53!UBERON:0002616;8.94e-35;53!UBERON:0000955;2.48e-31;68!UBERON:0001017;4.80e-31;75!UBERON:0001016;7.36e-23;83!UBERON:0002420;1.65e-22;9!UBERON:0007245;1.65e-22;9!UBERON:0010009;1.65e-22;9!UBERON:0010011;1.65e-22;9!UBERON:0000454;1.65e-22;9!UBERON:0001872;1.01e-21;5!UBERON:0000369;9.01e-18;4!UBERON:0002435;9.01e-18;4!UBERON:0000204;9.01e-18;4!UBERON:0000125;8.44e-17;9!UBERON:0002308;8.44e-17;9!UBERON:0009663;1.72e-15;7!UBERON:0001871;5.18e-15;6!UBERON:0002021;1.23e-14;5!UBERON:0005383;9.24e-14;3!UBERON:0005382;9.24e-14;3!UBERON:0000200;2.81e-12;6!UBERON:0002298;1.57e-11;6!UBERON:0007023;7.56e-10;114!UBERON:0001873;9.82e-10;2!UBERON:0001876;3.65e-09;2!UBERON:0000349;4.21e-08;5!UBERON:0011216;1.53e-07;132!UBERON:0001870;3.73e-07;3!UBERON:0000988;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.55e-65,56;UBERON:0005068,1.55e-65,56;UBERON:0006241,1.55e-65,56;UBERON:0007135,1.55e-65,56;UBERON:0000073,4.81e-65,53;UBERON:0002616,4.81e-65,53;UBERON:0001869,1.52e-64,32;UBERON:0002780,9.65e-64,41;UBERON:0001890,9.65e-64,41;UBERON:0003080,9.65e-64,41;UBERON:0006240,9.65e-64,41;UBERON:0001893,1.56e-60,34;UBERON:0003528,2.75e-60,34;UBERON:0002020,2.75e-60,34;UBERON:0000955,6.50e-60,68;UBERON:0006238,6.50e-60,68;UBERON:0001017,1.96e-59,81;UBERON:0002791,7.28e-59,32;UBERON:0001950,1.87e-56,20;UBERON:0001016,7.67e-53,89;UBERON:0002619,3.46e-51,22;UBERON:0000956,8.31e-45,25;UBERON:0000203,8.31e-45,25;UBERON:0003075,9.58e-43,82;UBERON:0007284,9.58e-43,82;UBERON:0010371,1.09e-42,104;UBERON:0003056,3.77e-41,61;UBERON:0002346,1.90e-40,86;UBERON:0004121,2.04e-31,171;UBERON:0000924,2.04e-31,171;UBERON:0006601,2.04e-31,171;UBERON:0007023,4.96e-27,114;UBERON:0010314,5.77e-24,132;UBERON:0002420,1.74e-22,9;UBERON:0007245,1.74e-22,9;UBERON:0010009,1.74e-22,9;UBERON:0010011,1.74e-22,9;UBERON:0000454,1.74e-22,9;UBERON:0001872,8.71e-22,5;UBERON:0011216,7.08e-18,223;UBERON:0000369,1.31e-17,4;UBERON:0002435,1.31e-17,4;UBERON:0000204,1.31e-17,4;UBERON:0010082,1.31e-17,4;UBERON:0000125,1.46e-16,9;UBERON:0002308,1.46e-16,9;UBERON:0000025,1.76e-15,192;UBERON:0009663,2.45e-15,7;UBERON:0001871,3.02e-15,6;UBERON:0002021,1.72e-14,5;UBERON:0005383,1.46e-13,3;UBERON:0005382,1.46e-13,3;UBERON:0000200,2.98e-12,6;UBERON:0002298,2.41e-11,6;UBERON:0004111,5.77e-11,240;UBERON:0000483,2.82e-10,306;UBERON:0000119,4.23e-10,309;UBERON:0001873,1.25e-09,2;UBERON:0010122,1.25e-09,2;UBERON:0001876,2.39e-09,2;UBERON:0000349,3.12e-08,5;UBERON:0001870,3.85e-07,3 | |||
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| ||
|short_description=p5@ROBO2 | |||
}} | }} |
Latest revision as of 15:58, 19 September 2015
Short description: | p5@ROBO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ROBO2_5end |
Coexpression cluster: | C4345_caudate_melanoma_merkel_smallcell_occipital_pons_amygdala |
Association with transcript: | -348bp_to_ENST00000475034_5end |
EntrezGene: | ROBO2 |
HGNC: | 10250 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 7.73e-10 | 2 |