FFCP PHASE1:Hg19::chr3:113557654..113557682,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54762 | |EntrezGene=54762 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25252 | |HGNC=25252 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IYS0 | |UniProt=Q8IYS0 | ||
|association_with_transcript=0bp_to_ENST00000498183,NM_017577,uc003eaq.3,uc011bim.1_5end | |association_with_transcript=0bp_to_ENST00000498183,NM_017577,uc003eaq.3,uc011bim.1_5end | ||
|cluster_id=chr3:113557654..113557682,+ | |||
|coexpression_cluster_id=C1387 | |coexpression_cluster_id=C1387 | ||
|description=CAGE_peak_3_at_GRAMD1C_5end | |description=CAGE_peak_3_at_GRAMD1C_5end | ||
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|ontology_enrichment_celltype=CL:0002139!1.84e-09!24;CL:0000236!9.26e-08!14;CL:0000115!2.04e-07!35;CL:0000071!2.52e-07!18;CL:0002546!2.52e-07!18 | |ontology_enrichment_celltype=CL:0002139!1.84e-09!24;CL:0000236!9.26e-08!14;CL:0000115!2.04e-07!35;CL:0000071!2.52e-07!18;CL:0002546!2.52e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.89e-13;13!CL:0002543;4.86e-07;6!CL:0002139;9.96e-07;24 | |ontology_enrichment_celltype_v019=CL:0000236;2.89e-13;13!CL:0002543;4.86e-07;6!CL:0002139;9.96e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.37e-12,14;CL:0000115,1.19e-08,36;CL:0002543,2.27e-07,6;CL:0002139,4.64e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.44e-09;82 | |ontology_enrichment_development_v019=UBERON:0006601;4.44e-09;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;5.65e-25;34!UBERON:0003528;8.11e-25;34!UBERON:0002020;8.11e-25;34!UBERON:0002791;1.09e-23;32!UBERON:0001869;1.21e-23;32!UBERON:0000073;6.93e-23;53!UBERON:0002616;6.93e-23;53!UBERON:0002780;1.74e-22;41!UBERON:0001890;1.74e-22;41!UBERON:0002619;4.81e-20;22!UBERON:0000956;7.19e-19;25!UBERON:0000203;7.19e-19;25!UBERON:0001950;1.37e-17;20!UBERON:0001017;3.37e-14;75!UBERON:0000955;4.38e-14;68!UBERON:0001016;5.78e-13;83!UBERON:0002420;2.09e-12;9!UBERON:0007245;2.09e-12;9!UBERON:0010009;2.09e-12;9!UBERON:0010011;2.09e-12;9!UBERON:0000454;2.09e-12;9!UBERON:0000125;2.23e-12;9!UBERON:0002308;2.23e-12;9!UBERON:0009663;9.56e-10;7!UBERON:0002298;3.31e-09;6!UBERON:0004732;3.35e-09;13!UBERON:0007023;4.77e-09;114!UBERON:0000200;2.17e-08;6!UBERON:0004733;4.20e-08;12!UBERON:0002028;4.20e-08;12!UBERON:0000349;7.77e-08;5!UBERON:0001872;7.11e-07;5!UBERON:0000178;8.63e-07;15!UBERON:0000179;8.63e-07;15!UBERON:0000463;8.63e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0001893;5.65e-25;34!UBERON:0003528;8.11e-25;34!UBERON:0002020;8.11e-25;34!UBERON:0002791;1.09e-23;32!UBERON:0001869;1.21e-23;32!UBERON:0000073;6.93e-23;53!UBERON:0002616;6.93e-23;53!UBERON:0002780;1.74e-22;41!UBERON:0001890;1.74e-22;41!UBERON:0002619;4.81e-20;22!UBERON:0000956;7.19e-19;25!UBERON:0000203;7.19e-19;25!UBERON:0001950;1.37e-17;20!UBERON:0001017;3.37e-14;75!UBERON:0000955;4.38e-14;68!UBERON:0001016;5.78e-13;83!UBERON:0002420;2.09e-12;9!UBERON:0007245;2.09e-12;9!UBERON:0010009;2.09e-12;9!UBERON:0010011;2.09e-12;9!UBERON:0000454;2.09e-12;9!UBERON:0000125;2.23e-12;9!UBERON:0002308;2.23e-12;9!UBERON:0009663;9.56e-10;7!UBERON:0002298;3.31e-09;6!UBERON:0004732;3.35e-09;13!UBERON:0007023;4.77e-09;114!UBERON:0000200;2.17e-08;6!UBERON:0004733;4.20e-08;12!UBERON:0002028;4.20e-08;12!UBERON:0000349;7.77e-08;5!UBERON:0001872;7.11e-07;5!UBERON:0000178;8.63e-07;15!UBERON:0000179;8.63e-07;15!UBERON:0000463;8.63e-07;15 | ||
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| ||
|short_description=p3@GRAMD1C | |short_description=p3@GRAMD1C | ||
}} | }} |
Latest revision as of 16:17, 19 September 2015
Short description: | p3@GRAMD1C |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GRAMD1C_5end |
Coexpression cluster: | C1387_Neutrophils_Eosinophils_Whole_brain_parietal_optic_temporal |
Association with transcript: | 0bp_to_ENST00000498183, NM_017577, uc003eaq.3, uc011bim.1_5end |
EntrezGene: | GRAMD1C |
HGNC: | 25252 |
UniProt: | Q8IYS0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 5.37e-12 | 14 |
endothelial cell | 1.19e-08 | 36 |
vein endothelial cell | 2.27e-07 | 6 |
endothelial cell of vascular tree | 4.64e-07 | 24 |