FFCP PHASE1:Hg19::chr10:85954377..85954438,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92211 | |EntrezGene=92211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14550 | |HGNC=14550 | ||
|TSSclassifier=strong | |||
|UniProt=F1T0L2,Q96JP9,B3KWC7 | |UniProt=F1T0L2,Q96JP9,B3KWC7 | ||
|association_with_transcript=0bp_to_ENST00000332904,ENST00000372117,NM_001171971,NM_033100_5end | |association_with_transcript=0bp_to_ENST00000332904,ENST00000372117,NM_001171971,NM_033100_5end | ||
|cluster_id=chr10:85954377..85954438,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_2_at_CDHR1_5end | |description=CAGE_peak_2_at_CDHR1_5end | ||
|id=chr10:85954377..85954438,+ | |id=chr10:85954377..85954438,+ | ||
|ontology_enrichment_celltype=CL:1000507!3.46e-08!12;CL:1000494!3.46e-08!12;CL:1000449!1.16e-07!16;CL:1000497!3.03e-07!18;CL:0002518!3.03e-07!18 | |ontology_enrichment_celltype=CL:1000507!3.46e-08!12;CL:1000494!3.46e-08!12;CL:1000449!1.16e-07!16;CL:1000497!3.03e-07!18;CL:0002518!3.03e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.44e-14;10!CL:1000494;1.44e-14;10!CL:1000449;9.52e-13;15!CL:1000497;7.52e-11;17!CL:0002518;7.52e-11;17!CL:0002681;3.81e-09;12!CL:0002584;3.81e-09;12!CL:0002368;5.96e-08;13!CL:0000244;2.22e-07;4!CL:0000731;2.22e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.25e-14,10;CL:1000494,1.25e-14,10;CL:1000449,1.08e-12,15;CL:1000497,8.36e-11,17;CL:0002518,8.36e-11,17;CL:0002681,4.98e-09,12;CL:0002584,4.98e-09,12;CL:0002368,6.28e-08,13;CL:0000244,1.90e-07,4;CL:0000731,1.90e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.14e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!5.18e-29!86;UBERON:0001017!8.65e-28!82;UBERON:0000073!8.69e-26!94;UBERON:0001016!8.69e-26!94;UBERON:0001049!2.63e-24!57;UBERON:0005068!2.63e-24!57;UBERON:0006241!2.63e-24!57;UBERON:0007135!2.63e-24!57;UBERON:0004121!9.36e-24!169;UBERON:0000153!1.59e-23!129;UBERON:0007811!1.59e-23!129;UBERON:0000033!3.31e-23!123;UBERON:0003075!9.69e-23!86;UBERON:0007284!9.69e-23!86;UBERON:0000955!1.12e-22!69;UBERON:0006238!1.12e-22!69;UBERON:0000924!2.24e-22!173;UBERON:0006601!2.24e-22!173;UBERON:0002616!2.93e-22!59;UBERON:0002780!1.48e-21!41;UBERON:0001890!1.48e-21!41;UBERON:0006240!1.48e-21!41;UBERON:0003080!1.12e-20!42;UBERON:0002346!1.17e-20!90;UBERON:0007023!3.02e-20!115;UBERON:0003056!5.27e-20!61;UBERON:0002020!6.86e-19!34;UBERON:0003528!6.86e-19!34;UBERON:0001893!1.27e-18!34;UBERON:0002791!5.85e-18!33;UBERON:0001869!1.42e-17!32;UBERON:0000064!4.92e-16!219;UBERON:0000475!6.51e-13!365;UBERON:0000956!7.60e-13!25;UBERON:0000203!7.60e-13!25;UBERON:0002619!1.22e-11!22;UBERON:0001950!1.43e-10!20;UBERON:0000922!8.58e-10!612;UBERON:0000481!1.20e-09!347;UBERON:0000119!3.50e-09!312;UBERON:0000483!1.24e-08!309;UBERON:0003887!1.82e-08!21;UBERON:0000923!2.65e-08!604;UBERON:0005291!2.65e-08!604;UBERON:0006598!2.65e-08!604;UBERON:0002532!2.65e-08!604;UBERON:0002050!3.41e-08!605;UBERON:0005423!3.41e-08!605;UBERON:0009773!3.46e-08!12;UBERON:0001231!3.46e-08!12;UBERON:0004810!3.46e-08!12;UBERON:0006555!8.61e-08!17;UBERON:0005103!8.61e-08!17;UBERON:0000083!8.61e-08!17;UBERON:0009201!8.61e-08!17;UBERON:0004819!8.61e-08!17;UBERON:0006553!8.61e-08!17;UBERON:0003074!8.61e-08!17;UBERON:0003060!8.61e-08!17;UBERON:0002308!1.05e-07!9;UBERON:0000125!1.05e-07!9;UBERON:0004211!1.16e-07!16;UBERON:0001285!1.16e-07!16;UBERON:0007684!1.16e-07!16;UBERON:0003220!1.16e-07!16;UBERON:0004208!1.16e-07!16;UBERON:0000062!1.35e-07!511;UBERON:0000480!2.29e-07!626;UBERON:0000467!3.30e-07!625;UBERON:0000080!4.38e-07!18;UBERON:0002120!4.38e-07!18;UBERON:0004875!4.38e-07!18;UBERON:0005721!4.38e-07!18;UBERON:0005754!4.38e-07!18;UBERON:0007297!4.38e-07!18;UBERON:0002420!5.61e-07!9;UBERON:0007245!5.61e-07!9;UBERON:0010009!5.61e-07!9;UBERON:0010011!5.61e-07!9;UBERON:0000454!5.61e-07!9;UBERON:0004876!9.03e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;6.72e-18;34!UBERON:0002020;6.72e-18;34!UBERON:0001893;1.85e-17;34!UBERON:0002780;5.03e-17;41!UBERON:0001890;5.03e-17;41!UBERON:0001869;8.50e-17;32!UBERON:0002791;9.57e-17;32!UBERON:0000073;1.80e-16;53!UBERON:0002616;1.80e-16;53!UBERON:0004211;1.44e-14;10!UBERON:0009773;1.44e-14;10!UBERON:0001231;1.44e-14;10!UBERON:0004810;1.44e-14;10!UBERON:0000955;2.22e-14;68!UBERON:0006555;9.52e-13;15!UBERON:0004819;9.52e-13;15!UBERON:0001285;9.52e-13;15!UBERON:0007684;9.52e-13;15!UBERON:0002619;1.48e-12;22!UBERON:0001017;2.55e-12;75!UBERON:0000956;5.97e-12;25!UBERON:0000203;5.97e-12;25!UBERON:0000125;8.12e-12;9!UBERON:0002308;8.12e-12;9!UBERON:0001950;5.59e-11;20!UBERON:0006554;6.47e-11;30!UBERON:0001008;6.47e-11;30!UBERON:0001016;1.34e-10;83!UBERON:0009663;2.82e-09;7!UBERON:0001225;3.81e-09;12!UBERON:0008987;3.81e-09;12!UBERON:0002298;1.90e-08;6!UBERON:0000353;2.61e-08;15!UBERON:0000489;3.97e-08;29!UBERON:0002113;7.24e-08;24!UBERON:0011143;7.24e-08;24!UBERON:0000200;8.94e-08;6!UBERON:0002420;6.23e-07;9!UBERON:0007245;6.23e-07;9!UBERON:0010009;6.23e-07;9!UBERON:0010011;6.23e-07;9!UBERON:0000454;6.23e-07;9!UBERON:0001851;6.83e-07;15 | |||
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| ||
|short_description=p2@CDHR1 | |short_description=p2@CDHR1 | ||
}} | }} |
Latest revision as of 16:45, 19 September 2015
Short description: | p2@CDHR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDHR1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000332904, ENST00000372117, NM_001171971, NM_033100_5end |
EntrezGene: | CDHR1 |
HGNC: | 14550 |
UniProt: | F1T0L2Q96JP9B3KWC7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.25e-14 | 10 |
nephron tubule epithelial cell | 1.25e-14 | 10 |
epithelial cell of nephron | 1.08e-12 | 15 |
kidney cell | 8.36e-11 | 17 |
kidney epithelial cell | 8.36e-11 | 17 |
kidney cortical cell | 4.98e-09 | 12 |
renal cortical epithelial cell | 4.98e-09 | 12 |
respiratory epithelial cell | 6.28e-08 | 13 |
transitional epithelial cell | 1.90e-07 | 4 |
urothelial cell | 1.90e-07 | 4 |