FFCP PHASE1:Hg19::chr22:31892159..31892189,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:31892159..31892189,+ to FFCP PHASE1:Hg19::chr22:31892159..31892189,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9814 | |EntrezGene=9814 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29064 | |HGNC=29064 | ||
|TSSclassifier=strong | |||
|UniProt=A8K8P3 | |UniProt=A8K8P3 | ||
|association_with_transcript=-71bp_to_ENST00000414585,ENST00000421060,ENST00000432498,ENST00000443326,ENST00000540643,NM_001007467,NM_014775,uc003ald.1,uc003ale.2,uc003alf.2,uc003alg.2,uc003alh.2,uc011alp.1,uc011alq.1_5end | |||
|cluster_id=chr22:31892159..31892189,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_2_at_SFI1_5end | |||
|id=chr22:31892159..31892189,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.39e-24!140;CL:0000037!1.13e-18!172;CL:0000566!1.13e-18!172;CL:0002087!1.43e-18!119;CL:0002031!9.46e-18!124;CL:0000988!1.32e-17!182;CL:0002032!5.91e-17!165;CL:0000837!5.91e-17!165;CL:0000766!3.59e-16!76;CL:0002057!2.52e-14!42;CL:0000557!4.06e-13!71;CL:0000860!4.76e-13!45;CL:0002009!3.51e-12!65;CL:0002194!1.17e-11!63;CL:0000576!1.17e-11!63;CL:0000040!1.17e-11!63;CL:0000559!1.17e-11!63;CL:0000839!6.33e-11!70;CL:0000791!7.74e-11!18;CL:0000789!7.74e-11!18;CL:0002420!7.74e-11!18;CL:0002419!7.74e-11!18;CL:0000790!7.74e-11!18;CL:0000763!9.82e-11!112;CL:0000049!9.82e-11!112;CL:0000084!6.65e-09!25;CL:0000827!6.65e-09!25;CL:0000625!4.81e-08!11;CL:0000838!5.80e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.50e-13;18!CL:0000789;1.50e-13;18!CL:0002419;1.50e-13;18!CL:0000860;2.18e-11;33!CL:0002057;2.18e-11;33!CL:0000084;2.70e-11;25!CL:0000576;6.21e-11;48!CL:0000625;5.05e-10;11!CL:0000766;9.76e-10;69!CL:0000473;1.14e-09;39!CL:0000234;1.14e-09;39!CL:0002087;3.04e-08;104!CL:0000094;1.13e-07;8!CL:0000738;3.38e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.53e-32,136;CL:0002087,5.74e-25,115;CL:0002031,2.87e-24,120;CL:0000037,2.23e-22,168;CL:0000988,2.62e-21,177;CL:0000766,3.30e-21,72;CL:0002032,1.43e-20,161;CL:0000837,1.43e-20,161;CL:0000860,1.06e-17,42;CL:0002057,1.06e-17,42;CL:0000473,2.29e-17,48;CL:0000234,2.29e-17,48;CL:0000557,4.42e-17,67;CL:0002009,4.63e-16,61;CL:0002194,2.32e-15,59;CL:0000576,2.32e-15,59;CL:0000040,2.32e-15,59;CL:0000559,2.32e-15,59;CL:0000839,6.79e-15,66;CL:0000791,1.44e-13,18;CL:0000789,1.44e-13,18;CL:0002420,1.44e-13,18;CL:0002419,1.44e-13,18;CL:0000790,1.44e-13,18;CL:0000763,4.51e-12,108;CL:0000049,4.51e-12,108;CL:0000084,3.46e-11,25;CL:0000827,3.46e-11,25;CL:0000625,3.95e-10,11;CL:0000838,4.59e-09,52;CL:0000542,1.14e-08,53;CL:0000051,1.14e-08,53;CL:0000094,9.03e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000790;1.50e-13;18!CL:0002057;2.57e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.11e-21!115;UBERON:0002390!8.17e-16!102;UBERON:0003061!8.17e-16!102;UBERON:0002193!1.83e-15!112;UBERON:0001049!4.20e-13!57;UBERON:0005068!4.20e-13!57;UBERON:0006241!4.20e-13!57;UBERON:0007135!4.20e-13!57;UBERON:0003080!1.29e-10!42;UBERON:0002780!2.48e-10!41;UBERON:0001890!2.48e-10!41;UBERON:0006240!2.48e-10!41;UBERON:0002616!5.51e-10!59;UBERON:0002371!2.49e-09!80;UBERON:0000955!4.01e-08!69;UBERON:0006238!4.01e-08!69;UBERON:0001893!4.35e-08!34;UBERON:0002020!4.69e-08!34;UBERON:0003528!4.69e-08!34;UBERON:0001474!5.79e-08!86;UBERON:0002791!8.61e-08!33;UBERON:0000178!1.91e-07!15;UBERON:0000179!1.91e-07!15;UBERON:0000463!1.91e-07!15;UBERON:0001869!2.35e-07!32;UBERON:0001017!4.85e-07!82;UBERON:0003075!5.56e-07!86;UBERON:0007284!5.56e-07!86;UBERON:0002619!6.31e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;9.92e-09;53!UBERON:0002616;9.92e-09;53!UBERON:0000178;1.03e-08;15!UBERON:0000179;1.03e-08;15!UBERON:0000463;1.03e-08;15!UBERON:0002780;1.19e-08;41!UBERON:0001890;1.19e-08;41!UBERON:0001950;3.87e-08;20!UBERON:0002619;4.39e-08;22!UBERON:0001893;1.72e-07;34!UBERON:0007023;2.15e-07;114!UBERON:0003528;2.26e-07;34!UBERON:0002020;2.26e-07;34!UBERON:0002791;3.26e-07;32!UBERON:0001869;4.14e-07;32 | |||
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| ||
|short_description=p2@SFI1 | |||
}} | }} |
Latest revision as of 20:42, 19 September 2015
Short description: | p2@SFI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SFI1_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | -71bp_to_ENST00000414585, ENST00000421060, ENST00000432498, ENST00000443326, ENST00000540643, NM_001007467, NM_014775, uc003ald.1, uc003ale.2, uc003alf.2, uc003alg.2, uc003alh.2, uc011alp.1, uc011alq.1_5end |
EntrezGene: | SFI1 |
HGNC: | 29064 |
UniProt: | A8K8P3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.16e-24 | 114 |
hematopoietic system | 8.23e-21 | 98 |
blood island | 8.23e-21 | 98 |
hemolymphoid system | 1.52e-19 | 108 |
neural tube | 3.16e-15 | 56 |
neural rod | 3.16e-15 | 56 |
future spinal cord | 3.16e-15 | 56 |
neural keel | 3.16e-15 | 56 |
regional part of nervous system | 7.13e-14 | 53 |
regional part of brain | 7.13e-14 | 53 |
immune system | 2.62e-13 | 93 |
bone marrow | 7.89e-13 | 76 |
regional part of forebrain | 7.04e-12 | 41 |
forebrain | 7.04e-12 | 41 |
anterior neural tube | 7.04e-12 | 41 |
future forebrain | 7.04e-12 | 41 |
bone element | 1.30e-10 | 82 |
brain | 1.27e-09 | 68 |
future brain | 1.27e-09 | 68 |
telencephalon | 2.16e-09 | 34 |
brain grey matter | 2.37e-09 | 34 |
gray matter | 2.37e-09 | 34 |
skeletal element | 1.03e-08 | 90 |
blood | 1.07e-08 | 15 |
haemolymphatic fluid | 1.07e-08 | 15 |
organism substance | 1.07e-08 | 15 |
regional part of telencephalon | 1.14e-08 | 32 |
central nervous system | 1.46e-08 | 81 |
cerebral hemisphere | 1.89e-08 | 32 |
neocortex | 2.21e-08 | 20 |
regional part of cerebral cortex | 2.58e-08 | 22 |
neural plate | 6.20e-08 | 82 |
presumptive neural plate | 6.20e-08 | 82 |
lateral plate mesoderm | 1.40e-07 | 203 |
skeletal system | 4.12e-07 | 100 |
neurectoderm | 6.38e-07 | 86 |