FFCP PHASE1:Hg19::chr9:103235453..103235470,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8577 | |EntrezGene=8577 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11866 | |HGNC=11866 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IYR6 | |UniProt=Q8IYR6 | ||
|association_with_transcript=-49bp_to_NM_003692_5end | |association_with_transcript=-49bp_to_NM_003692_5end | ||
|cluster_id=chr9:103235453..103235470,+ | |||
|coexpression_cluster_id=C4786 | |coexpression_cluster_id=C4786 | ||
|description=CAGE_peak_3_at_TMEFF1_5end | |description=CAGE_peak_3_at_TMEFF1_5end | ||
|id=chr9:103235453..103235470,+ | |id=chr9:103235453..103235470,+ | ||
|ontology_enrichment_celltype=CL:0002139!6.25e-11!24;CL:0002319!2.69e-10!25;CL:0000047!2.15e-08!8;CL:0000133!2.27e-08!59;CL:0000071!2.39e-07!18;CL:0002546!2.39e-07!18;CL:0000115!2.71e-07!35;CL:0000540!8.45e-07!6;CL:0000031!8.45e-07!6;CL:0000404!8.45e-07!6 | |ontology_enrichment_celltype=CL:0002139!6.25e-11!24;CL:0002319!2.69e-10!25;CL:0000047!2.15e-08!8;CL:0000133!2.27e-08!59;CL:0000071!2.39e-07!18;CL:0002546!2.39e-07!18;CL:0000115!2.71e-07!35;CL:0000540!8.45e-07!6;CL:0000031!8.45e-07!6;CL:0000404!8.45e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.03e-11;6!CL:0000404;1.03e-11;6!CL:0002322;3.48e-10;5!CL:0002319;1.53e-09;25!CL:0002138;6.91e-09;6!CL:0002321;1.69e-08;15!CL:0000039;4.92e-08;7!CL:0000586;4.92e-08;7!CL:0002139;1.13e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.51e-15,8;CL:0000540,1.02e-11,6;CL:0000031,1.02e-11,6;CL:0000404,1.02e-11,6;CL:0002322,3.38e-10,5;CL:0002319,1.39e-09,25;CL:0005020,5.93e-09,6;CL:0002138,5.93e-09,6;CL:0005022,5.93e-09,6;CL:0000039,7.19e-08,7;CL:0000586,7.19e-08,7;CL:0002139,8.76e-08,24;CL:0000133,3.22e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;1.03e-11;6!CL:0005022;6.91e-09;6!UBERON:0006601;8.55e-09;82!UBERON:0009117;1.80e-07;10!UBERON:0005564;1.80e-07;10 | |||
|ontology_enrichment_disease=DOID:3095!7.11e-11!22;DOID:2994!7.11e-11!22 | |ontology_enrichment_disease=DOID:3095!7.11e-11!22;DOID:2994!7.11e-11!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;6.59e-10;22!DOID:2994;6.59e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,8.13e-10,22;DOID:2994,8.13e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.30e-34!94;UBERON:0001016!1.30e-34!94;UBERON:0005743!7.08e-31!86;UBERON:0001017!1.06e-29!82;UBERON:0001049!6.26e-23!57;UBERON:0005068!6.26e-23!57;UBERON:0006241!6.26e-23!57;UBERON:0007135!6.26e-23!57;UBERON:0000955!1.58e-21!69;UBERON:0006238!1.58e-21!69;UBERON:0002346!3.56e-20!90;UBERON:0003075!1.06e-18!86;UBERON:0007284!1.06e-18!86;UBERON:0002780!2.28e-18!41;UBERON:0001890!2.28e-18!41;UBERON:0006240!2.28e-18!41;UBERON:0001893!3.07e-18!34;UBERON:0002020!3.38e-18!34;UBERON:0003528!3.38e-18!34;UBERON:0003080!1.41e-17!42;UBERON:0002791!1.61e-17!33;UBERON:0002616!1.89e-17!59;UBERON:0000924!2.79e-17!173;UBERON:0006601!2.79e-17!173;UBERON:0001869!1.10e-16!32;UBERON:0003056!3.24e-16!61;UBERON:0004121!5.02e-16!169;UBERON:0000025!1.17e-13!194;UBERON:0000153!4.18e-12!129;UBERON:0007811!4.18e-12!129;UBERON:0000033!6.02e-12!123;UBERON:0000956!8.73e-12!25;UBERON:0000203!8.73e-12!25;UBERON:0004111!2.59e-11!241;UBERON:0002619!2.37e-10!22;UBERON:0001950!3.94e-09!20;UBERON:0000119!1.23e-08!312;UBERON:0002308!2.94e-08!9;UBERON:0000125!2.94e-08!9;UBERON:0000483!3.07e-08!309;UBERON:0000477!4.08e-08!286;UBERON:0001986!2.39e-07!18;UBERON:0004638!2.39e-07!18;UBERON:0004852!2.39e-07!18;UBERON:0000468!4.23e-07!659;UBERON:0009663!9.63e-07!7 | |ontology_enrichment_uberon=UBERON:0000073!1.30e-34!94;UBERON:0001016!1.30e-34!94;UBERON:0005743!7.08e-31!86;UBERON:0001017!1.06e-29!82;UBERON:0001049!6.26e-23!57;UBERON:0005068!6.26e-23!57;UBERON:0006241!6.26e-23!57;UBERON:0007135!6.26e-23!57;UBERON:0000955!1.58e-21!69;UBERON:0006238!1.58e-21!69;UBERON:0002346!3.56e-20!90;UBERON:0003075!1.06e-18!86;UBERON:0007284!1.06e-18!86;UBERON:0002780!2.28e-18!41;UBERON:0001890!2.28e-18!41;UBERON:0006240!2.28e-18!41;UBERON:0001893!3.07e-18!34;UBERON:0002020!3.38e-18!34;UBERON:0003528!3.38e-18!34;UBERON:0003080!1.41e-17!42;UBERON:0002791!1.61e-17!33;UBERON:0002616!1.89e-17!59;UBERON:0000924!2.79e-17!173;UBERON:0006601!2.79e-17!173;UBERON:0001869!1.10e-16!32;UBERON:0003056!3.24e-16!61;UBERON:0004121!5.02e-16!169;UBERON:0000025!1.17e-13!194;UBERON:0000153!4.18e-12!129;UBERON:0007811!4.18e-12!129;UBERON:0000033!6.02e-12!123;UBERON:0000956!8.73e-12!25;UBERON:0000203!8.73e-12!25;UBERON:0004111!2.59e-11!241;UBERON:0002619!2.37e-10!22;UBERON:0001950!3.94e-09!20;UBERON:0000119!1.23e-08!312;UBERON:0002308!2.94e-08!9;UBERON:0000125!2.94e-08!9;UBERON:0000483!3.07e-08!309;UBERON:0000477!4.08e-08!286;UBERON:0001986!2.39e-07!18;UBERON:0004638!2.39e-07!18;UBERON:0004852!2.39e-07!18;UBERON:0000468!4.23e-07!659;UBERON:0009663!9.63e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.85e-27;34!UBERON:0003528;8.32e-27;34!UBERON:0002020;8.32e-27;34!UBERON:0002791;1.49e-25;32!UBERON:0001869;1.84e-25;32!UBERON:0002780;6.11e-23;41!UBERON:0001890;6.11e-23;41!UBERON:0000073;1.96e-21;53!UBERON:0002616;1.96e-21;53!UBERON:0000956;9.70e-20;25!UBERON:0000203;9.70e-20;25!UBERON:0002619;1.45e-18;22!UBERON:0001017;6.74e-17;75!UBERON:0001016;1.05e-16;83!UBERON:0000955;1.70e-16;68!UBERON:0001950;3.20e-16;20!UBERON:0000125;1.99e-14;9!UBERON:0002308;1.99e-14;9!UBERON:0009663;1.60e-11;7!UBERON:0002298;2.43e-10;6!UBERON:0002420;1.18e-08;9!UBERON:0007245;1.18e-08;9!UBERON:0010009;1.18e-08;9!UBERON:0010011;1.18e-08;9!UBERON:0000454;1.18e-08;9!UBERON:0001872;2.76e-08;5!UBERON:0004732;2.79e-07;13!UBERON:0000369;5.79e-07;4!UBERON:0002435;5.79e-07;4!UBERON:0000204;5.79e-07;4 | |||
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| ||
|short_description=p3@TMEFF1 | |short_description=p3@TMEFF1 | ||
}} | }} |
Latest revision as of 21:07, 19 September 2015
Short description: | p3@TMEFF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEFF1_5end |
Coexpression cluster: | C4786_occipital_H9_parietal_Neural_duodenum_Neurons_temporal |
Association with transcript: | -49bp_to_NM_003692_5end |
EntrezGene: | TMEFF1 |
HGNC: | 11866 |
UniProt: | Q8IYR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.51e-15 | 8 |
neuron | 1.02e-11 | 6 |
neuroblast | 1.02e-11 | 6 |
electrically signaling cell | 1.02e-11 | 6 |
embryonic stem cell | 3.38e-10 | 5 |
neural cell | 1.39e-09 | 25 |
lymphangioblast | 5.93e-09 | 6 |
endothelial cell of lymphatic vessel | 5.93e-09 | 6 |
vascular lymphangioblast | 5.93e-09 | 6 |
germ line cell | 7.19e-08 | 7 |
germ cell | 7.19e-08 | 7 |
endothelial cell of vascular tree | 8.76e-08 | 24 |
neurectodermal cell | 3.22e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.13e-10 | 22 |
germ cell cancer | 8.13e-10 | 22 |