FFCP PHASE1:Hg19::chr9:103235584..103235650,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8577 | |EntrezGene=8577 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11866 | |HGNC=11866 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IYR6 | |UniProt=Q8IYR6 | ||
|association_with_transcript=64bp_to_NM_003692_5end | |association_with_transcript=64bp_to_NM_003692_5end | ||
|cluster_id=chr9:103235584..103235650,+ | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_2_at_TMEFF1_5end | |description=CAGE_peak_2_at_TMEFF1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002319!1.18e-08!25;CL:0002139!1.13e-07!24 | |ontology_enrichment_celltype=CL:0002319!1.18e-08!25;CL:0002139!1.13e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.65e-10;25!CL:0000540;3.96e-08;6!CL:0000404;3.96e-08;6!CL:0002321;1.19e-07;15 | |ontology_enrichment_celltype_v019=CL:0002319;1.65e-10;25!CL:0000540;3.96e-08;6!CL:0000404;3.96e-08;6!CL:0002321;1.19e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.54e-10,25;CL:0000047,2.37e-10,8;CL:0000540,3.86e-08,6;CL:0000031,3.86e-08,6;CL:0000404,3.86e-08,6;CL:0000133,2.72e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.88e-14;82!CL:0000031;3.96e-08;6 | |ontology_enrichment_development_v019=UBERON:0006601;5.88e-14;82!CL:0000031;3.96e-08;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;5.78e-36;32!UBERON:0001893;5.99e-36;34!UBERON:0003528;8.37e-36;34!UBERON:0002020;8.37e-36;34!UBERON:0002791;9.08e-36;32!UBERON:0000956;6.26e-31;25!UBERON:0000203;6.26e-31;25!UBERON:0002619;9.02e-29;22!UBERON:0002780;1.41e-28;41!UBERON:0001890;1.41e-28;41!UBERON:0001950;2.12e-26;20!UBERON:0000073;1.53e-25;53!UBERON:0002616;1.53e-25;53!UBERON:0001016;7.54e-20;83!UBERON:0000955;9.64e-20;68!UBERON:0001017;1.85e-19;75!UBERON:0002420;4.45e-12;9!UBERON:0007245;4.45e-12;9!UBERON:0010009;4.45e-12;9!UBERON:0010011;4.45e-12;9!UBERON:0000454;4.45e-12;9!UBERON:0000125;5.13e-12;9!UBERON:0002308;5.13e-12;9!UBERON:0009663;8.50e-10;7!UBERON:0001871;2.24e-09;6!UBERON:0000200;9.06e-09;6!UBERON:0004732;2.95e-08;13!UBERON:0002298;3.82e-08;6!UBERON:0001872;8.56e-08;5!UBERON:0002021;1.28e-07;5!UBERON:0000349;1.52e-07;5!UBERON:0011216;1.55e-07;132!UBERON:0004733;4.12e-07;12!UBERON:0002028;4.12e-07;12!UBERON:0000922;8.63e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0001869;5.78e-36;32!UBERON:0001893;5.99e-36;34!UBERON:0003528;8.37e-36;34!UBERON:0002020;8.37e-36;34!UBERON:0002791;9.08e-36;32!UBERON:0000956;6.26e-31;25!UBERON:0000203;6.26e-31;25!UBERON:0002619;9.02e-29;22!UBERON:0002780;1.41e-28;41!UBERON:0001890;1.41e-28;41!UBERON:0001950;2.12e-26;20!UBERON:0000073;1.53e-25;53!UBERON:0002616;1.53e-25;53!UBERON:0001016;7.54e-20;83!UBERON:0000955;9.64e-20;68!UBERON:0001017;1.85e-19;75!UBERON:0002420;4.45e-12;9!UBERON:0007245;4.45e-12;9!UBERON:0010009;4.45e-12;9!UBERON:0010011;4.45e-12;9!UBERON:0000454;4.45e-12;9!UBERON:0000125;5.13e-12;9!UBERON:0002308;5.13e-12;9!UBERON:0009663;8.50e-10;7!UBERON:0001871;2.24e-09;6!UBERON:0000200;9.06e-09;6!UBERON:0004732;2.95e-08;13!UBERON:0002298;3.82e-08;6!UBERON:0001872;8.56e-08;5!UBERON:0002021;1.28e-07;5!UBERON:0000349;1.52e-07;5!UBERON:0011216;1.55e-07;132!UBERON:0004733;4.12e-07;12!UBERON:0002028;4.12e-07;12!UBERON:0000922;8.63e-07;49 | ||
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| ||
|short_description=p2@TMEFF1 | |short_description=p2@TMEFF1 | ||
}} | }} |
Latest revision as of 21:08, 19 September 2015
Short description: | p2@TMEFF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEFF1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 64bp_to_NM_003692_5end |
EntrezGene: | TMEFF1 |
HGNC: | 11866 |
UniProt: | Q8IYR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.54e-10 | 25 |
neuronal stem cell | 2.37e-10 | 8 |
neuron | 3.86e-08 | 6 |
neuroblast | 3.86e-08 | 6 |
electrically signaling cell | 3.86e-08 | 6 |
neurectodermal cell | 2.72e-07 | 59 |