FFCP PHASE1:Hg19::chr19:55690710..55690728,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:55690710..55690728,- to FFCP PHASE1:Hg19::chr19:55690710..55690728,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6861 | |EntrezGene=6861 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11513 | |HGNC=11513 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z300 | |UniProt=B7Z300 | ||
|association_with_transcript=29bp_to_ENST00000543844_5end | |||
|cluster_id=chr19:55690710..55690728,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_SYT5_5end | |||
|id=chr19:55690710..55690728,- | |||
|ontology_enrichment_celltype=CL:0000623!8.59e-07!3;CL:0000825!8.59e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.48e-13;82!UBERON:0006222;8.69e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!6.22e-43!86;UBERON:0002780!7.00e-43!41;UBERON:0001890!7.00e-43!41;UBERON:0006240!7.00e-43!41;UBERON:0001049!9.55e-42!57;UBERON:0005068!9.55e-42!57;UBERON:0006241!9.55e-42!57;UBERON:0007135!9.55e-42!57;UBERON:0001017!9.71e-42!82;UBERON:0003080!1.21e-41!42;UBERON:0001893!4.73e-40!34;UBERON:0001869!7.21e-40!32;UBERON:0000073!3.04e-39!94;UBERON:0001016!3.04e-39!94;UBERON:0000955!2.22e-38!69;UBERON:0006238!2.22e-38!69;UBERON:0002791!4.34e-38!33;UBERON:0002616!1.30e-37!59;UBERON:0002020!7.74e-37!34;UBERON:0003528!7.74e-37!34;UBERON:0002619!6.62e-35!22;UBERON:0001950!5.95e-31!20;UBERON:0000956!4.06e-30!25;UBERON:0000203!4.06e-30!25;UBERON:0003075!4.26e-30!86;UBERON:0007284!4.26e-30!86;UBERON:0003056!2.44e-29!61;UBERON:0002346!3.25e-28!90;UBERON:0007023!2.38e-22!115;UBERON:0000153!1.53e-21!129;UBERON:0007811!1.53e-21!129;UBERON:0000033!6.85e-21!123;UBERON:0004121!1.04e-16!169;UBERON:0000924!5.15e-16!173;UBERON:0006601!5.15e-16!173;UBERON:0000200!1.30e-13!6;UBERON:0001871!2.40e-13!7;UBERON:0000349!8.15e-12!5;UBERON:0002420!1.54e-11!9;UBERON:0007245!1.54e-11!9;UBERON:0010009!1.54e-11!9;UBERON:0010011!1.54e-11!9;UBERON:0000454!1.54e-11!9;UBERON:0002021!4.30e-11!5;UBERON:0000369!1.19e-09!4;UBERON:0002435!1.19e-09!4;UBERON:0000204!1.19e-09!4;UBERON:0010082!1.19e-09!4;UBERON:0002308!2.76e-08!9;UBERON:0000125!2.76e-08!9;UBERON:0009663!7.90e-08!7;UBERON:0005383!1.48e-07!3;UBERON:0005382!1.48e-07!3;UBERON:0002771!2.22e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.09e-72;22!UBERON:0001869;3.73e-71;32!UBERON:0002791;1.68e-66;32!UBERON:0001893;5.93e-66;34!UBERON:0000956;1.94e-63;25!UBERON:0000203;1.94e-63;25!UBERON:0001950;1.65e-60;20!UBERON:0003528;3.36e-56;34!UBERON:0002020;3.36e-56;34!UBERON:0002780;7.75e-54;41!UBERON:0001890;7.75e-54;41!UBERON:0000349;7.26e-34;5!UBERON:0000073;2.42e-32;53!UBERON:0002616;2.42e-32;53!UBERON:0000955;2.80e-29;68!UBERON:0000200;3.65e-28;6!UBERON:0001017;2.87e-25;75!UBERON:0001871;5.28e-24;6!UBERON:0001870;3.61e-21;3!UBERON:0002420;9.67e-19;9!UBERON:0007245;9.67e-19;9!UBERON:0010009;9.67e-19;9!UBERON:0010011;9.67e-19;9!UBERON:0000454;9.67e-19;9!UBERON:0001016;3.38e-16;83!UBERON:0000369;6.48e-16;4!UBERON:0002435;6.48e-16;4!UBERON:0000204;6.48e-16;4!UBERON:0001876;1.37e-14;2!UBERON:0002702;1.68e-14;2!UBERON:0001954;1.74e-14;2!UBERON:0003022;1.74e-14;2!UBERON:0002421;1.74e-14;2!UBERON:0002600;1.74e-14;2!UBERON:0002021;9.39e-13;5!UBERON:0007023;5.24e-11;114!UBERON:0005383;6.42e-10;3!UBERON:0005382;6.42e-10;3!UBERON:0011216;1.37e-09;132!UBERON:0009663;2.59e-09;7!UBERON:0002022;2.04e-08;1!UBERON:0001882;2.44e-08;1!UBERON:0001874;2.44e-08;1!UBERON:0005403;2.44e-08;1!UBERON:0002581;2.90e-08;1!UBERON:0002902;2.90e-08;1!UBERON:0009899;2.90e-08;1!UBERON:0007190;2.90e-08;1!UBERON:0003112;5.04e-08;1!UBERON:0011158;5.04e-08;1!UBERON:0003128;5.04e-08;1!UBERON:0001703;5.04e-08;1!UBERON:0002241;5.04e-08;1!UBERON:0000125;2.42e-07;9!UBERON:0002308;2.42e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.27e-78,32;UBERON:0001893,1.59e-73,34;UBERON:0002780,1.63e-73,41;UBERON:0001890,1.63e-73,41;UBERON:0003080,1.63e-73,41;UBERON:0006240,1.63e-73,41;UBERON:0002619,4.30e-72,22;UBERON:0002791,2.54e-70,32;UBERON:0003528,4.29e-66,34;UBERON:0002020,4.29e-66,34;UBERON:0000956,2.03e-63,25;UBERON:0000203,2.03e-63,25;UBERON:0001950,1.55e-60,20;UBERON:0000073,2.87e-56,53;UBERON:0002616,2.87e-56,53;UBERON:0000955,1.32e-55,68;UBERON:0006238,1.32e-55,68;UBERON:0001049,4.33e-53,56;UBERON:0005068,4.33e-53,56;UBERON:0006241,4.33e-53,56;UBERON:0007135,4.33e-53,56;UBERON:0001017,3.80e-50,81;UBERON:0003056,1.79e-48,61;UBERON:0001016,8.51e-45,89;UBERON:0003075,3.74e-35,82;UBERON:0007284,3.74e-35,82;UBERON:0000349,7.79e-34,5;UBERON:0002346,2.41e-33,86;UBERON:0007023,1.26e-29,114;UBERON:0000200,3.27e-28,6;UBERON:0010371,6.65e-27,104;UBERON:0001871,5.04e-24,6;UBERON:0010314,1.77e-22,132;UBERON:0004121,1.72e-21,171;UBERON:0000924,1.72e-21,171;UBERON:0006601,1.72e-21,171;UBERON:0001870,3.87e-21,3;UBERON:0002420,7.75e-19,9;UBERON:0007245,7.75e-19,9;UBERON:0010009,7.75e-19,9;UBERON:0010011,7.75e-19,9;UBERON:0000454,7.75e-19,9;UBERON:0011216,2.02e-18,223;UBERON:0000369,5.03e-16,4;UBERON:0002435,5.03e-16,4;UBERON:0000204,5.03e-16,4;UBERON:0010082,5.03e-16,4;UBERON:0001876,1.28e-14,2;UBERON:0002702,1.80e-14,2;UBERON:0001954,2.06e-14,2;UBERON:0003022,2.06e-14,2;UBERON:0002421,2.06e-14,2;UBERON:0002600,2.06e-14,2;UBERON:0002021,9.39e-13,5;UBERON:0000025,1.11e-12,192;UBERON:0005383,5.24e-10,3;UBERON:0005382,5.24e-10,3;UBERON:0009663,2.25e-09,7;UBERON:0004111,2.70e-09,240;UBERON:0002022,1.91e-08,1;UBERON:0001882,2.35e-08,1;UBERON:0005403,2.35e-08,1;UBERON:0001874,2.52e-08,1;UBERON:0002581,2.71e-08,1;UBERON:0007190,2.90e-08,1;UBERON:0002902,3.11e-08,1;UBERON:0009899,3.11e-08,1;UBERON:0003112,5.79e-08,1;UBERON:0011158,5.79e-08,1;UBERON:0003128,5.79e-08,1;UBERON:0001703,5.79e-08,1;UBERON:0002241,5.79e-08,1;UBERON:0004761,5.79e-08,1;UBERON:0009617,5.79e-08,1;UBERON:0000125,2.17e-07,9;UBERON:0002308,2.17e-07,9 | |||
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| ||
|short_description=p3@SYT5 | |||
}} | }} |
Latest revision as of 00:39, 20 September 2015
Short description: | p3@SYT5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SYT5_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 29bp_to_ENST00000543844_5end |
EntrezGene: | SYT5 |
HGNC: | 11513 |
UniProt: | B7Z300 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data