FFCP PHASE1:Hg19::chr12:7245018..7245073,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=715 | |EntrezGene=715 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1246 | |HGNC=1246 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2D0,F5H1V0,F5H3N3,P00736 | |UniProt=F5H2D0,F5H1V0,F5H3N3,P00736 | ||
|association_with_transcript=0bp_to_ENST00000535233,ENST00000540394,ENST00000543362,ENST00000543835,ENST00000545466,NM_001733,uc010sfy.1,uc010sga.1_5end | |association_with_transcript=0bp_to_ENST00000535233,ENST00000540394,ENST00000543362,ENST00000543835,ENST00000545466,NM_001733,uc010sfy.1,uc010sga.1_5end | ||
|cluster_id=chr12:7245018..7245073,- | |||
|coexpression_cluster_id=C424 | |coexpression_cluster_id=C424 | ||
|description=CAGE_peak_1_at_C1R_5end | |description=CAGE_peak_1_at_C1R_5end | ||
|id=chr12:7245018..7245073,- | |id=chr12:7245018..7245073,- | ||
|ontology_enrichment_celltype=CL:0000055!4.67e-23!180;CL:0000057!3.02e-14!75;CL:0000183!1.36e-10!59;CL:0000680!1.40e-10!57;CL:0000056!1.40e-10!57;CL:0000355!1.40e-10!57;CL:0000187!2.85e-10!54;CL:0000393!3.29e-09!60;CL:0000211!3.29e-09!60;CL:0000192!5.44e-07!42;CL:0000514!5.44e-07!42;CL:0000136!8.40e-07!15 | |ontology_enrichment_celltype=CL:0000055!4.67e-23!180;CL:0000057!3.02e-14!75;CL:0000183!1.36e-10!59;CL:0000680!1.40e-10!57;CL:0000056!1.40e-10!57;CL:0000355!1.40e-10!57;CL:0000187!2.85e-10!54;CL:0000393!3.29e-09!60;CL:0000211!3.29e-09!60;CL:0000192!5.44e-07!42;CL:0000514!5.44e-07!42;CL:0000136!8.40e-07!15 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.66e-14,76;CL:0000680,2.95e-11,58;CL:0000056,2.95e-11,58;CL:0000355,2.95e-11,58;CL:0000187,6.09e-11,55;CL:0000393,1.79e-09,61;CL:0000211,1.79e-09,61;CL:0000192,1.49e-07,43;CL:0000514,1.49e-07,43;CL:0000136,6.40e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.90e-24!347;UBERON:0000475!5.57e-24!365;UBERON:0005256!9.65e-16!143;UBERON:0000468!2.40e-15!659;UBERON:0000477!5.65e-15!286;UBERON:0003104!1.13e-14!238;UBERON:0009142!1.13e-14!238;UBERON:0002100!3.89e-14!216;UBERON:0000914!8.44e-13!83;UBERON:0002329!8.44e-13!83;UBERON:0003077!8.44e-13!83;UBERON:0003059!8.44e-13!83;UBERON:0007282!8.44e-13!83;UBERON:0009618!8.44e-13!83;UBERON:0007285!8.44e-13!83;UBERON:0000119!1.27e-12!312;UBERON:0000483!1.94e-12!309;UBERON:0002385!2.76e-12!63;UBERON:0001015!2.76e-12!63;UBERON:0000383!2.76e-12!63;UBERON:0001134!1.44e-11!61;UBERON:0002036!1.44e-11!61;UBERON:0003082!1.44e-11!61;UBERON:0004290!1.66e-11!70;UBERON:0000467!2.89e-11!625;UBERON:0000480!5.23e-11!626;UBERON:0007023!5.64e-11!115;UBERON:0004111!7.16e-11!241;UBERON:0000486!3.55e-10!82;UBERON:0003102!2.24e-09!95;UBERON:0007100!1.82e-08!27;UBERON:0000490!1.88e-08!138;UBERON:0000062!2.34e-08!511;UBERON:0000922!3.99e-08!612;UBERON:0002050!4.94e-08!605;UBERON:0005423!4.94e-08!605;UBERON:0000923!7.74e-08!604;UBERON:0005291!7.74e-08!604;UBERON:0006598!7.74e-08!604;UBERON:0002532!7.74e-08!604;UBERON:0000948!1.31e-07!24;UBERON:0005498!1.31e-07!24;UBERON:0004140!1.31e-07!24;UBERON:0009881!1.31e-07!24;UBERON:0004141!1.31e-07!24;UBERON:0003084!1.31e-07!24;UBERON:0007005!1.31e-07!24;UBERON:0004139!1.31e-07!24;UBERON:0004291!1.31e-07!24;UBERON:0003103!1.97e-07!69;UBERON:0001048!2.04e-07!168;UBERON:0001007!3.36e-07!155;UBERON:0001555!3.36e-07!155;UBERON:0007026!3.36e-07!155;UBERON:0000025!4.44e-07!194;UBERON:0003914!7.85e-07!118 | |ontology_enrichment_uberon=UBERON:0000481!3.90e-24!347;UBERON:0000475!5.57e-24!365;UBERON:0005256!9.65e-16!143;UBERON:0000468!2.40e-15!659;UBERON:0000477!5.65e-15!286;UBERON:0003104!1.13e-14!238;UBERON:0009142!1.13e-14!238;UBERON:0002100!3.89e-14!216;UBERON:0000914!8.44e-13!83;UBERON:0002329!8.44e-13!83;UBERON:0003077!8.44e-13!83;UBERON:0003059!8.44e-13!83;UBERON:0007282!8.44e-13!83;UBERON:0009618!8.44e-13!83;UBERON:0007285!8.44e-13!83;UBERON:0000119!1.27e-12!312;UBERON:0000483!1.94e-12!309;UBERON:0002385!2.76e-12!63;UBERON:0001015!2.76e-12!63;UBERON:0000383!2.76e-12!63;UBERON:0001134!1.44e-11!61;UBERON:0002036!1.44e-11!61;UBERON:0003082!1.44e-11!61;UBERON:0004290!1.66e-11!70;UBERON:0000467!2.89e-11!625;UBERON:0000480!5.23e-11!626;UBERON:0007023!5.64e-11!115;UBERON:0004111!7.16e-11!241;UBERON:0000486!3.55e-10!82;UBERON:0003102!2.24e-09!95;UBERON:0007100!1.82e-08!27;UBERON:0000490!1.88e-08!138;UBERON:0000062!2.34e-08!511;UBERON:0000922!3.99e-08!612;UBERON:0002050!4.94e-08!605;UBERON:0005423!4.94e-08!605;UBERON:0000923!7.74e-08!604;UBERON:0005291!7.74e-08!604;UBERON:0006598!7.74e-08!604;UBERON:0002532!7.74e-08!604;UBERON:0000948!1.31e-07!24;UBERON:0005498!1.31e-07!24;UBERON:0004140!1.31e-07!24;UBERON:0009881!1.31e-07!24;UBERON:0004141!1.31e-07!24;UBERON:0003084!1.31e-07!24;UBERON:0007005!1.31e-07!24;UBERON:0004139!1.31e-07!24;UBERON:0004291!1.31e-07!24;UBERON:0003103!1.97e-07!69;UBERON:0001048!2.04e-07!168;UBERON:0001007!3.36e-07!155;UBERON:0001555!3.36e-07!155;UBERON:0007026!3.36e-07!155;UBERON:0000025!4.44e-07!194;UBERON:0003914!7.85e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.14e-08;25!UBERON:0000948;2.35e-07;22!UBERON:0002385;5.32e-07;31!UBERON:0001015;5.32e-07;31!UBERON:0000383;5.32e-07;31 | |||
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|phase1_expression=321.389052929615,422.42033363691,553.386990480783,586.429528349344,1051.25249409298,624.594383255864,215.304896443064,677.203704313563,1625.0969786594,18.1843113011117,4.18680700783456,0,0.263766978228454,216.962416738962,249.210826547393,77.3173918419542,74.7341214749731,66.458218225251,53.1846750681653,40.1374649330329,32.4361099078362,61.7505801311833,30.9134866101541,6.84372125364421,10.0434111675842,0,0,0,0,0,0.154816123316076,0.919421224478927,1.204823675113,0.739508020333575,0,0,0,8.86392653651004,0,0,1.11957737119962,1.94336199611388,1.03030227053675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,26.0321786132349,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1265.35763616946,489.611627583654,455.957895534029,496.255956224009,611.130913065149,620.087947671286,115.316462322409,637.978314966756,7.6573201902895,4.65631734671384,4.83091321312193,136.545686206365,14.2075162434091,2.59549109949101,0.324547393654683,0,0,0,0,0,0.39752481473341,5.16140757063675,0.347140501607594,0.56530794192401,0,1.37559020970034,0.208994966536811,0.258416759169329,0,0,6.0424397566372,0,17.32840608592,0,0.81014194788176,0.446498641420399,1.12264686313085,0.788280363383256,1.53316637465883,0,2.19842092716489,0,0,10.9023513035634,258.425414881566,115.613657149761,140.486140842825,1986.91727192703,167.048808015426,323.510975282111,41.6321083345849,32.0667812942308,182.369666744263,70.0495494762378,53.7789661243279,178.147692338084,133.09663855488,36.3198219342385,17.4809643024979,2.2818872861778,53.353178956993,5.98915943083201,11.8167249388736,8.9888516289439,20.2112629542344,11.3007571926827,109.008699140433,1013.36643726159,783.836165813025,91.9262975557407,311.880273548247,14.8135780279578,12.5118519871964,18.8403598529244,143.984659648915,87.6555095985196,608.013424394997,31.8744434679659,149.7903458002,523.856274771946,382.960945395328,105.031883629541,157.258159617858,206.112432036503,122.464891466186,167.088568918854,82.8214543870188,215.32600943023,410.174348350086,1007.86316426529,142.358846599162,29.117356387788,74.0979788396831,3.09217365061275,10.6370987030426,0.860413786167011,1.34171076742555,0.662648841607426,1.62671520017326,3.00617059544574,1.7662459561294,0.36497735907583,294.125120780054,208.410063974495,12.4321429217232,204.321888334071,173.97295508237,25.0810416084469,28.9965666934335,19.2808823906786,26.029377564845,29.1958455083824,20.4052732435543,24.4044667769898,29.2369983036766,21.9305879459443,0.738155454624648,21.0362660705169,430.506415852644,664.47937546265,4345.16259369236,2949.46447724956,2682.77696624026,0,5.90344505006945,29.5096633713464,0.658501712451753,0,1.20634766893957,5.46271826435325,19.2226900133092,65.5158914726134,4.3299402607582,16.2302566965108,31.582938749436,87.1973344476886,125.932059420838,81.6190313086426,0,0.858486162094873,0.984868024349589,0,0.148631162288728,3.74935335947108,7.72717789714754,7.65585525108887,2.32852159027406,0.290633938513962,7.28427090413901,0.492663237895943,1.84901711427775,5.59785911960085,2.88239906833923,3.40854570251226,6.03229995775606,4.20187268114105,8.20522130470329,195.022588465884,2.15937734676979,1.50171528921959,1.14330573052231,12.2222881936443,148.226423403315,6.8937988671693,194.553932215456,1187.41940022825,38.883926617576,129.511862776832,46.8033466101147,22.1198341865442,1.41849132023278,7.99266537048298,642.829059487031,296.814018149119,81.5007933412961,37.1339250094858,530.600179472621,69.6917648181418,80.1828742978499,20.0452695478068,73.3801755276299,0,0,0,18.6907387283434,283.708981510261,47.0701786634371,30.6936370135268,73.3550471504869,71.2662633694784,0,0,0,0,17.7866236955724,29.932166387253,29.3849748855524,13.5688174920822,44.6557126157214,0,0,0,890.985612864394,155.0528615285,121.797995641181,415.109839615491,135.962889463437,195.550994642079,545.527569621065,362.339104072174,297.90383031334,389.058748059819,28.5617007370238,21.3868235508376,305.743439313184,211.269448902297,230.935524224706,0,0,0,0.303127571446259,0,10.2812699732091,67.7334315345261,130.135753348277,157.730973071387,169.656233614548,184.214609664013,190.290188712888,237.468906311986,44.2581821213621,78.4822825884022,81.4701387656987,76.8496555191759,43.3464711655648,1.57117284469109,2.00506470303285,0.368323955743585,348.92110797224,222.879589640222,825.428192169575,2.70719767744447,1.38627606787947,1.56869953835371,1.46139224653261,2.63879072232189,3.4120015221269,0.850468526382578,0.863663664408557,9.25363516141736,21.4047685659644,40.1351819083883,2.03901018436031,10.8039881160734,2.23874754722178,0,0,19.2337593837292,46.2500650436585,56.6158406715887,745.913883317862,2.01452822600355,2.39277549769705,11.4853107599234,5.20048196829217,727.898202194043,152.256381310092,86.1131769670862,133.087685987554,22.1916881700094,318.930707013904,272.486367864835,39.2042486114064,305.825042446543,2.64455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| ||
|short_description=p1@C1R | |short_description=p1@C1R | ||
}} | }} |
Latest revision as of 18:00, 24 September 2015
Short description: | p1@C1R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C1R_5end |
Coexpression cluster: | C424_Hepatocyte_liver_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Cardiac |
Association with transcript: | 0bp_to_ENST00000535233, ENST00000540394, ENST00000543362, ENST00000543835, ENST00000545466, NM_001733, uc010sfy.1, uc010sga.1_5end |
EntrezGene: | C1R |
HGNC: | 1246 |
UniProt: | F5H2D0F5H1V0F5H3N3P00736 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.66e-14 | 76 |
muscle precursor cell | 2.95e-11 | 58 |
myoblast | 2.95e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.95e-11 | 58 |
muscle cell | 6.09e-11 | 55 |
electrically responsive cell | 1.79e-09 | 61 |
electrically active cell | 1.79e-09 | 61 |
smooth muscle cell | 1.49e-07 | 43 |
smooth muscle myoblast | 1.49e-07 | 43 |
fat cell | 6.40e-07 | 15 |