FFCP PHASE1:Hg19::chr2:220309386..220309413,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10290 | |EntrezGene=10290 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16901 | |HGNC=16901 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-353bp_to_ENST00000409595_5end | |association_with_transcript=-353bp_to_ENST00000409595_5end | ||
|cluster_id=chr2:220309386..220309413,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_SPEG_5end | |description=CAGE_peak_5_at_SPEG_5end | ||
|id=chr2:220309386..220309413,+ | |id=chr2:220309386..220309413,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.63e-10;82!UBERON:0010122;4.92e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;3.79e-11;3!DOID:127;3.79e-11;3!DOID:0060072;1.80e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.14e-11,3;DOID:127,4.14e-11,3;DOID:0060072,1.93e-08,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.66e-52;32!UBERON:0001893;6.28e-49;34!UBERON:0002791;1.62e-48;32!UBERON:0002619;1.16e-47;22!UBERON:0003528;1.51e-45;34!UBERON:0002020;1.51e-45;34!UBERON:0000956;1.29e-41;25!UBERON:0000203;1.29e-41;25!UBERON:0001950;3.93e-41;20!UBERON:0002780;5.01e-41;41!UBERON:0001890;5.01e-41;41!UBERON:0000073;1.23e-23;53!UBERON:0002616;1.23e-23;53!UBERON:0000955;3.33e-22;68!UBERON:0000200;3.01e-21;6!UBERON:0002420;1.48e-20;9!UBERON:0007245;1.48e-20;9!UBERON:0010009;1.48e-20;9!UBERON:0010011;1.48e-20;9!UBERON:0000454;1.48e-20;9!UBERON:0000349;3.30e-19;5!UBERON:0001017;4.51e-18;75!UBERON:0000369;2.29e-16;4!UBERON:0002435;2.29e-16;4!UBERON:0000204;2.29e-16;4!UBERON:0009663;5.11e-14;7!UBERON:0001016;8.76e-14;83!UBERON:0001871;3.47e-13;6!UBERON:0005383;1.04e-12;3!UBERON:0005382;1.04e-12;3!UBERON:0001872;9.51e-12;5!UBERON:0001870;1.21e-11;3!UBERON:0000125;8.19e-11;9!UBERON:0002308;8.19e-11;9!UBERON:0007023;1.55e-09;114!UBERON:0001873;4.92e-09;2!UBERON:0001876;1.05e-08;2!UBERON:0001954;1.50e-08;2!UBERON:0003022;1.50e-08;2!UBERON:0002421;1.50e-08;2!UBERON:0002600;1.50e-08;2!UBERON:0011216;3.78e-08;132!UBERON:0002702;4.63e-08;2!UBERON:0002771;5.64e-08;2!UBERON:0001897;8.17e-08;2!UBERON:0010225;8.17e-08;2!UBERON:0002021;3.36e-07;5 | |||
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|short_description=p5@SPEG | |short_description=p5@SPEG | ||
}} | }} |
Latest revision as of 21:17, 24 September 2015
Short description: | p5@SPEG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SPEG_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -353bp_to_ENST00000409595_5end |
EntrezGene: | SPEG |
HGNC: | 16901 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.14e-11 | 3 |
leiomyoma | 4.14e-11 | 3 |
benign neoplasm | 1.93e-08 | 4 |