FFCP PHASE1:Hg19::chr2:220309386..220309413,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:220309386..220309413,+
|short_description=p5@SPEG
|description=CAGE_peak_5_at_SPEG_5end
|association_with_transcript=-353bp_to_ENST00000409595_5end
|Entre...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10290 | |EntrezGene=10290 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16901 | |HGNC=16901 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-353bp_to_ENST00000409595_5end | |||
|cluster_id=chr2:220309386..220309413,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_SPEG_5end | |||
|id=chr2:220309386..220309413,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.63e-10;82!UBERON:0010122;4.92e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;3.79e-11;3!DOID:127;3.79e-11;3!DOID:0060072;1.80e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.14e-11,3;DOID:127,4.14e-11,3;DOID:0060072,1.93e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.12e-55!115;UBERON:0001869!7.50e-39!32;UBERON:0001893!1.06e-38!34;UBERON:0002780!2.91e-38!41;UBERON:0001890!2.91e-38!41;UBERON:0006240!2.91e-38!41;UBERON:0003080!4.15e-37!42;UBERON:0002791!4.92e-37!33;UBERON:0002020!3.66e-33!34;UBERON:0003528!3.66e-33!34;UBERON:0002619!8.98e-32!22;UBERON:0001049!1.54e-29!57;UBERON:0005068!1.54e-29!57;UBERON:0006241!1.54e-29!57;UBERON:0007135!1.54e-29!57;UBERON:0001950!2.10e-28!20;UBERON:0002616!3.67e-28!59;UBERON:0000956!2.86e-27!25;UBERON:0000203!2.86e-27!25;UBERON:0000955!5.31e-27!69;UBERON:0006238!5.31e-27!69;UBERON:0003056!1.78e-25!61;UBERON:0001017!4.77e-25!82;UBERON:0000073!5.93e-25!94;UBERON:0001016!5.93e-25!94;UBERON:0003075!6.49e-25!86;UBERON:0007284!6.49e-25!86;UBERON:0005743!1.61e-24!86;UBERON:0002346!1.72e-24!90;UBERON:0000033!3.20e-15!123;UBERON:0000153!6.09e-14!129;UBERON:0007811!6.09e-14!129;UBERON:0000924!6.99e-14!173;UBERON:0006601!6.99e-14!173;UBERON:0004121!8.02e-14!169;UBERON:0002420!2.48e-13!9;UBERON:0007245!2.48e-13!9;UBERON:0010009!2.48e-13!9;UBERON:0010011!2.48e-13!9;UBERON:0000454!2.48e-13!9;UBERON:0000025!1.72e-11!194;UBERON:0000200!2.41e-11!6;UBERON:0001871!4.30e-11!7;UBERON:0000349!2.70e-10!5;UBERON:0004111!3.09e-10!241;UBERON:0009663!6.05e-10!7;UBERON:0001872!2.48e-09!5;UBERON:0000369!7.32e-09!4;UBERON:0002435!7.32e-09!4;UBERON:0000204!7.32e-09!4;UBERON:0010082!7.32e-09!4;UBERON:0002308!1.75e-07!9;UBERON:0000125!1.75e-07!9;UBERON:0000064!1.98e-07!219;UBERON:0000481!2.59e-07!347;UBERON:0005383!4.64e-07!3;UBERON:0005382!4.64e-07!3;UBERON:0000477!8.34e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.66e-52;32!UBERON:0001893;6.28e-49;34!UBERON:0002791;1.62e-48;32!UBERON:0002619;1.16e-47;22!UBERON:0003528;1.51e-45;34!UBERON:0002020;1.51e-45;34!UBERON:0000956;1.29e-41;25!UBERON:0000203;1.29e-41;25!UBERON:0001950;3.93e-41;20!UBERON:0002780;5.01e-41;41!UBERON:0001890;5.01e-41;41!UBERON:0000073;1.23e-23;53!UBERON:0002616;1.23e-23;53!UBERON:0000955;3.33e-22;68!UBERON:0000200;3.01e-21;6!UBERON:0002420;1.48e-20;9!UBERON:0007245;1.48e-20;9!UBERON:0010009;1.48e-20;9!UBERON:0010011;1.48e-20;9!UBERON:0000454;1.48e-20;9!UBERON:0000349;3.30e-19;5!UBERON:0001017;4.51e-18;75!UBERON:0000369;2.29e-16;4!UBERON:0002435;2.29e-16;4!UBERON:0000204;2.29e-16;4!UBERON:0009663;5.11e-14;7!UBERON:0001016;8.76e-14;83!UBERON:0001871;3.47e-13;6!UBERON:0005383;1.04e-12;3!UBERON:0005382;1.04e-12;3!UBERON:0001872;9.51e-12;5!UBERON:0001870;1.21e-11;3!UBERON:0000125;8.19e-11;9!UBERON:0002308;8.19e-11;9!UBERON:0007023;1.55e-09;114!UBERON:0001873;4.92e-09;2!UBERON:0001876;1.05e-08;2!UBERON:0001954;1.50e-08;2!UBERON:0003022;1.50e-08;2!UBERON:0002421;1.50e-08;2!UBERON:0002600;1.50e-08;2!UBERON:0011216;3.78e-08;132!UBERON:0002702;4.63e-08;2!UBERON:0002771;5.64e-08;2!UBERON:0001897;8.17e-08;2!UBERON:0010225;8.17e-08;2!UBERON:0002021;3.36e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.37e-59,32;UBERON:0002780,4.19e-58,41;UBERON:0001890,4.19e-58,41;UBERON:0003080,4.19e-58,41;UBERON:0006240,4.19e-58,41;UBERON:0001893,8.21e-56,34;UBERON:0002791,1.89e-54,32;UBERON:0003528,5.54e-51,34;UBERON:0002020,5.54e-51,34;UBERON:0002619,8.24e-48,22;UBERON:0000073,1.37e-43,53;UBERON:0002616,1.37e-43,53;UBERON:0000956,9.52e-42,25;UBERON:0000203,9.52e-42,25;UBERON:0001950,2.89e-41,20;UBERON:0001049,6.46e-41,56;UBERON:0005068,6.46e-41,56;UBERON:0006241,6.46e-41,56;UBERON:0007135,6.46e-41,56;UBERON:0000955,3.63e-40,68;UBERON:0006238,3.63e-40,68;UBERON:0003056,6.66e-40,61;UBERON:0007023,2.79e-37,114;UBERON:0001016,1.74e-35,89;UBERON:0001017,4.27e-35,81;UBERON:0003075,3.99e-30,82;UBERON:0007284,3.99e-30,82;UBERON:0002346,2.15e-28,86;UBERON:0010371,3.03e-22,104;UBERON:0000200,2.15e-21,6;UBERON:0002420,1.40e-20,9;UBERON:0007245,1.40e-20,9;UBERON:0010009,1.40e-20,9;UBERON:0010011,1.40e-20,9;UBERON:0000454,1.40e-20,9;UBERON:0000349,2.91e-19,5;UBERON:0010314,8.42e-19,132;UBERON:0011216,3.11e-17,223;UBERON:0004121,3.58e-17,171;UBERON:0000924,3.58e-17,171;UBERON:0006601,3.58e-17,171;UBERON:0000369,2.34e-16,4;UBERON:0002435,2.34e-16,4;UBERON:0000204,2.34e-16,4;UBERON:0010082,2.34e-16,4;UBERON:0009663,5.33e-14,7;UBERON:0001871,2.95e-13,6;UBERON:0005383,1.02e-12,3;UBERON:0005382,1.02e-12,3;UBERON:0001870,9.55e-12,3;UBERON:0001872,1.19e-11,5;UBERON:0000025,1.36e-11,192;UBERON:0000125,8.45e-11,9;UBERON:0002308,8.45e-11,9;UBERON:0004111,2.81e-09,240;UBERON:0001873,5.02e-09,2;UBERON:0010122,5.02e-09,2;UBERON:0001876,9.21e-09,2;UBERON:0001954,1.44e-08,2;UBERON:0003022,1.44e-08,2;UBERON:0002421,1.44e-08,2;UBERON:0002600,1.44e-08,2;UBERON:0002702,3.60e-08,2;UBERON:0002771,5.16e-08,2;UBERON:0001897,6.62e-08,2;UBERON:0010225,6.62e-08,2;UBERON:0002021,2.93e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42311289670768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302256294682921,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41151501647669,1.74306691720059,6.69819040919782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.709522128141196,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,4.97073823883149,6.75213198770461,0,0,0,3.38721580026819,1.10513566212459,0,0,0,0,0,0,0,2.46608514092334,0,0,4.84666373047609,1.76259386507517,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,7.08593108651071,10.6124865990359,0,0,0,2.4132393686937,0,0,2.23155749661011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.619202951523374,0.611030144933625,0,0,0,0.404406797884062,0,5.3880822516828,0,0,0,0.394584402849391,0,0.61214552326098,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,6.07783641176436,0,0.0801588202515337,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,4.20294202096853,0.547621515567972,0,0.429765441419957,0,0.279282401272254,1.60412296808179,0,0.199679000498991,0,0,0.268733889946905,0,0,0,0,0,0,0,5.56660782866512,3.54128855890097,0,0,0,0,0,8.26193970549135,0,0.157611414598396,0.0524545881349981,0,0,0,0,0.662091970365432,0,1.08599920350743,6.04955043840887,1.95952416065645,1.19730191562487,0,0,0,0,0,0,0,0,0,0.106787412567695,0.628817220398664,0,0,0,0,0,0,0,0,0,0,2.65820453990096,1.70836770862748,2.50381861413,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601030435988874,2.28483127301277,0,0,0.214821114084977,0,0,0,0,0,0,0,2.57329909649911,0.521988583930423,0,0,0,0.358177682162975,0.308801447160972,0,0,4.05119480368921,0.337884881306145,0,0,0,3.73297777609673,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,2.04630994085843,2.47997066212368,0,0.109209638192014,0,0,0,0,0,0,0,0,0,8.15711158725036,2.8339315265117,0.638535436228605,3.07674546361133,0,5.60173744960165,1.93770774758221,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,4.86270609252441,2.34323429584154,0.826747186004736,3.93178023202222,1.09394961803644,0,0.992422356778588,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,1.8863681038116,0.271878931907327,5.32759465859078,0,0,1.41287567130925,8.3271262655481,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.231522474323834,0,0,2.94177986104687,0,0,0,0,0,0,0,0,0,0,0,2.19100916473955,0,0,0,7.4110724308097,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,1.65833887891756,2.68925789240928,0,0,0,0,0,0,0,0.217716747896961,0.684466602170562,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,5.25638209986326,0.406896178315738,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42311289670768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302256294682921,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41151501647669,1.74306691720059,6.69819040919782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.709522128141196,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,4.97073823883149,6.75213198770461,0,0,0,3.38721580026819,1.10513566212459,0,0,0,0,0,0,0,2.46608514092334,0,0,4.84666373047609,1.76259386507517,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,7.08593108651071,10.6124865990359,0,0,0,2.4132393686937,0,0,2.23155749661011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.619202951523374,0.611030144933625,0,0,0,0.404406797884062,0,5.3880822516828,0,0,0,0.394584402849391,0,0.61214552326098,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,6.07783641176436,0,0.0801588202515337,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,4.20294202096853,0.547621515567972,0,0.429765441419957,0,0.279282401272254,1.60412296808179,0,0.199679000498991,0,0,0.268733889946905,0,0,0,0,0,0,0,5.56660782866512,3.54128855890097,0,0,0,0,0,8.26193970549135,0,0.157611414598396,0.0524545881349981,0,0,0,0,0.662091970365432,0,1.08599920350743,6.04955043840887,1.95952416065645,1.19730191562487,0,0,0,0,0,0,0,0,0,0.106787412567695,0.628817220398664,0,0,0,0,0,0,0,0,0,0,2.65820453990096,1.70836770862748,2.50381861413,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601030435988874,2.28483127301277,0,0,0.214821114084977,0,0,0,0,0,0,0,2.57329909649911,0.521988583930423,0,0,0,0.358177682162975,0.308801447160972,0,0,4.05119480368921,0.337884881306145,0,0,0,3.73297777609673,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,2.04630994085843,2.47997066212368,0,0.109209638192014,0,0,0,0,0,0,0,0,0,8.15711158725036,2.8339315265117,0.638535436228605,3.07674546361133,0,5.60173744960165,1.93770774758221,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,4.86270609252441,2.34323429584154,0.826747186004736,3.93178023202222,1.09394961803644,0,0.992422356778588,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,1.8863681038116,0.271878931907327,5.32759465859078,0,0,1.41287567130925,8.3271262655481,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.231522474323834,0,0,2.94177986104687,0,0,0,0,0,0,0,0,0,0,0,2.19100916473955,0,0,0,7.4110724308097,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,1.65833887891756,2.68925789240928,0,0,0,0,0,0,0,0.217716747896961,0.684466602170562,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,5.25638209986326,0.406896178315738,0,0.603821380773079,0 | ||
|short_description=p5@SPEG | |||
}} | }} |
Latest revision as of 21:17, 24 September 2015
Short description: | p5@SPEG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SPEG_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -353bp_to_ENST00000409595_5end |
EntrezGene: | SPEG |
HGNC: | 16901 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.14e-11 | 3 |
leiomyoma | 4.14e-11 | 3 |
benign neoplasm | 1.93e-08 | 4 |