FFCP PHASE1:Hg19::chr20:24450259..24450346,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79953 | |EntrezGene=79953 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15885 | |HGNC=15885 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H7V2 | |UniProt=Q9H7V2 | ||
|association_with_transcript=424bp_to_ENST00000376862,NM_024893,uc002wtw.1_5end | |association_with_transcript=424bp_to_ENST00000376862,NM_024893,uc002wtw.1_5end | ||
|cluster_id=chr20:24450259..24450346,+ | |||
|coexpression_cluster_id=C1480 | |coexpression_cluster_id=C1480 | ||
|description=CAGE_peak_1_at_SYNDIG1_5end | |description=CAGE_peak_1_at_SYNDIG1_5end | ||
|id=chr20:24450259..24450346,+ | |id=chr20:24450259..24450346,+ | ||
|ontology_enrichment_celltype=CL:0002319;3.79e-07;25 | |ontology_enrichment_celltype=CL:0000133!5.17e-08!59;CL:0000221!2.83e-07!71;CL:0002319!6.54e-07!25 | ||
| | |ontology_enrichment_celltype_v019=CL:0002319;3.79e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000133,1.35e-07,59;CL:0002319,3.87e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.37e-15;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001893;1.60e-30;34!UBERON:0003528;7.09e-30;34!UBERON:0002020;7.09e-30;34!UBERON:0001869;9.67e-30;32!UBERON:0002791;1.06e-29;32!UBERON:0000073;1.73e-28;53!UBERON:0002616;1.73e-28;53!UBERON:0002780;7.26e-27;41!UBERON:0001890;7.26e-27;41!UBERON:0000956;1.68e-25;25!UBERON:0000203;1.68e-25;25!UBERON:0000955;2.18e-24;68!UBERON:0002619;7.94e-24;22!UBERON:0001017;6.86e-23;75!UBERON:0001016;5.99e-22;83!UBERON:0001950;7.78e-22;20!UBERON:0004732;1.30e-15;13!UBERON:0004733;2.24e-14;12!UBERON:0002028;2.24e-14;12!UBERON:0002680;2.76e-11;9!UBERON:0001895;2.76e-11;9!UBERON:0000125;6.23e-11;9!UBERON:0002308;6.23e-11;9!UBERON:0002420;7.37e-11;9!UBERON:0007245;7.37e-11;9!UBERON:0010009;7.37e-11;9!UBERON:0010011;7.37e-11;9!UBERON:0000454;7.37e-11;9!UBERON:0007023;1.37e-09;114!UBERON:0009663;6.01e-09;7!UBERON:0010314;2.50e-08;132!UBERON:0002037;3.18e-08;6!UBERON:0000200;3.59e-08;6!UBERON:0002298;8.64e-08;6!UBERON:0011216;1.16e-07;132!UBERON:0002021;2.51e-07;5!UBERON:0001872;3.07e-07;5 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.27e-44!82;UBERON:0000073!3.45e-44!94;UBERON:0001016!3.45e-44!94;UBERON:0005743!2.73e-43!86;UBERON:0000955!2.62e-37!69;UBERON:0006238!2.62e-37!69;UBERON:0002346!5.04e-37!90;UBERON:0001049!6.31e-37!57;UBERON:0005068!6.31e-37!57;UBERON:0006241!6.31e-37!57;UBERON:0007135!6.31e-37!57;UBERON:0002616!2.58e-35!59;UBERON:0003075!7.62e-35!86;UBERON:0007284!7.62e-35!86;UBERON:0007023!3.07e-32!115;UBERON:0000924!2.24e-29!173;UBERON:0006601!2.24e-29!173;UBERON:0004121!1.79e-27!169;UBERON:0002780!3.21e-26!41;UBERON:0001890!3.21e-26!41;UBERON:0006240!3.21e-26!41;UBERON:0003080!3.90e-25!42;UBERON:0001893!4.77e-25!34;UBERON:0002020!8.42e-25!34;UBERON:0003528!8.42e-25!34;UBERON:0002791!3.19e-24!33;UBERON:0003056!6.51e-24!61;UBERON:0000153!8.56e-24!129;UBERON:0007811!8.56e-24!129;UBERON:0000033!9.25e-24!123;UBERON:0001869!2.46e-23!32;UBERON:0000956!4.15e-18!25;UBERON:0000203!4.15e-18!25;UBERON:0002619!5.76e-17!22;UBERON:0001950!1.46e-15!20;UBERON:0003076!6.47e-13!15;UBERON:0003057!6.47e-13!15;UBERON:0000475!9.63e-12!365;UBERON:0004732!1.83e-11!13;UBERON:0004733!1.36e-10!12;UBERON:0002028!1.36e-10!12;UBERON:0007277!1.36e-10!12;UBERON:0000025!1.05e-09!194;UBERON:0000119!2.21e-09!312;UBERON:0000483!8.49e-09!309;UBERON:0002680!2.11e-08!9;UBERON:0001895!2.11e-08!9;UBERON:0010092!2.11e-08!9;UBERON:0000468!3.08e-08!659;UBERON:0002308!3.77e-08!9;UBERON:0000125!3.77e-08!9;UBERON:0002420!4.23e-08!9;UBERON:0007245!4.23e-08!9;UBERON:0010009!4.23e-08!9;UBERON:0010011!4.23e-08!9;UBERON:0000454!4.23e-08!9;UBERON:0000064!1.58e-07!219;UBERON:0009663!9.74e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.60e-30;34!UBERON:0003528;7.09e-30;34!UBERON:0002020;7.09e-30;34!UBERON:0001869;9.67e-30;32!UBERON:0002791;1.06e-29;32!UBERON:0000073;1.73e-28;53!UBERON:0002616;1.73e-28;53!UBERON:0002780;7.26e-27;41!UBERON:0001890;7.26e-27;41!UBERON:0000956;1.68e-25;25!UBERON:0000203;1.68e-25;25!UBERON:0000955;2.18e-24;68!UBERON:0002619;7.94e-24;22!UBERON:0001017;6.86e-23;75!UBERON:0001016;5.99e-22;83!UBERON:0001950;7.78e-22;20!UBERON:0004732;1.30e-15;13!UBERON:0004733;2.24e-14;12!UBERON:0002028;2.24e-14;12!UBERON:0002680;2.76e-11;9!UBERON:0001895;2.76e-11;9!UBERON:0000125;6.23e-11;9!UBERON:0002308;6.23e-11;9!UBERON:0002420;7.37e-11;9!UBERON:0007245;7.37e-11;9!UBERON:0010009;7.37e-11;9!UBERON:0010011;7.37e-11;9!UBERON:0000454;7.37e-11;9!UBERON:0007023;1.37e-09;114!UBERON:0009663;6.01e-09;7!UBERON:0010314;2.50e-08;132!UBERON:0002037;3.18e-08;6!UBERON:0000200;3.59e-08;6!UBERON:0002298;8.64e-08;6!UBERON:0011216;1.16e-07;132!UBERON:0002021;2.51e-07;5!UBERON:0001872;3.07e-07;5 | |||
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| ||
|short_description=p1@SYNDIG1 | |short_description=p1@SYNDIG1 | ||
}} | }} |
Latest revision as of 21:38, 24 September 2015
Short description: | p1@SYNDIG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYNDIG1_5end |
Coexpression cluster: | C1480_optic_neuroectodermal_corpus_cerebellum_diencephalon_occipital_Astrocyte |
Association with transcript: | 424bp_to_ENST00000376862, NM_024893, uc002wtw.1_5end |
EntrezGene: | SYNDIG1 |
HGNC: | 15885 |
UniProt: | Q9H7V2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 1.35e-07 | 59 |
neural cell | 3.87e-07 | 25 |