FFCP PHASE1:Hg19::chrX:33357425..33357435,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:33357425..33357435,- to FFCP PHASE1:Hg19::chrX:33357425..33357435,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1756 | |EntrezGene=1756 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2928 | |HGNC=2928 | ||
|TSSclassifier=strong | |||
|UniProt=Q4G0X0 | |UniProt=Q4G0X0 | ||
|association_with_transcript=122bp_to_ENST00000288447_5end | |||
|cluster_id=chrX:33357425..33357435,- | |||
|coexpression_cluster_id=C1062 | |||
|description=CAGE_peak_23_at_DMD_5end | |||
|id=chrX:33357425..33357435,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.16e-26;1!DOID:4549;2.16e-26;1!DOID:5861;2.16e-26;1!DOID:6496;2.16e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.16e-26,1;DOID:4549,2.16e-26,1;DOID:5861,2.16e-26,1;DOID:6496,2.16e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.88e-89!57;UBERON:0005068!1.88e-89!57;UBERON:0006241!1.88e-89!57;UBERON:0007135!1.88e-89!57;UBERON:0002780!1.95e-76!41;UBERON:0001890!1.95e-76!41;UBERON:0006240!1.95e-76!41;UBERON:0003080!1.85e-74!42;UBERON:0002616!5.73e-73!59;UBERON:0002020!2.61e-70!34;UBERON:0003528!2.61e-70!34;UBERON:0001893!5.01e-70!34;UBERON:0002791!5.15e-67!33;UBERON:0001017!4.17e-65!82;UBERON:0005743!9.05e-65!86;UBERON:0001869!1.54e-64!32;UBERON:0000955!1.38e-63!69;UBERON:0006238!1.38e-63!69;UBERON:0003075!1.91e-62!86;UBERON:0007284!1.91e-62!86;UBERON:0000073!1.03e-60!94;UBERON:0001016!1.03e-60!94;UBERON:0002346!3.12e-59!90;UBERON:0003056!2.95e-52!61;UBERON:0002619!6.84e-50!22;UBERON:0007023!2.37e-44!115;UBERON:0000956!1.53e-43!25;UBERON:0000203!1.53e-43!25;UBERON:0001950!2.26e-43!20;UBERON:0000033!6.40e-38!123;UBERON:0000153!9.45e-38!129;UBERON:0007811!9.45e-38!129;UBERON:0004121!3.54e-31!169;UBERON:0000924!3.23e-30!173;UBERON:0006601!3.23e-30!173;UBERON:0002420!5.51e-30!9;UBERON:0007245!5.51e-30!9;UBERON:0010009!5.51e-30!9;UBERON:0010011!5.51e-30!9;UBERON:0000454!5.51e-30!9;UBERON:0002308!3.40e-29!9;UBERON:0000125!3.40e-29!9;UBERON:0009663!3.26e-23!7;UBERON:0000025!1.99e-19!194;UBERON:0000349!2.66e-18!5;UBERON:0001872!2.57e-17!5;UBERON:0003076!4.65e-16!15;UBERON:0003057!4.65e-16!15;UBERON:0004111!1.10e-15!241;UBERON:0001871!1.15e-15!7;UBERON:0000200!2.12e-14!6;UBERON:0000369!4.57e-14!4;UBERON:0002435!4.57e-14!4;UBERON:0000204!4.57e-14!4;UBERON:0010082!4.57e-14!4;UBERON:0002298!1.10e-13!8;UBERON:0000477!1.70e-12!286;UBERON:0002771!1.21e-11!3;UBERON:0000483!1.47e-11!309;UBERON:0000119!2.39e-11!312;UBERON:0002240!4.97e-11!3;UBERON:0005383!5.32e-11!3;UBERON:0005382!5.32e-11!3;UBERON:0000475!5.85e-11!365;UBERON:0002021!1.44e-10!5;UBERON:0006331!1.77e-10!3;UBERON:0000988!2.02e-10!3;UBERON:0000064!3.72e-10!219;UBERON:0004733!5.42e-09!12;UBERON:0002028!5.42e-09!12;UBERON:0007277!5.42e-09!12;UBERON:0001876!1.69e-08!2;UBERON:0001905!1.75e-08!2;UBERON:0002757!1.75e-08!2;UBERON:0010134!1.75e-08!2;UBERON:0002784!1.75e-08!2;UBERON:0005408!1.75e-08!2;UBERON:0001899!1.75e-08!2;UBERON:0001954!1.88e-08!2;UBERON:0003022!1.88e-08!2;UBERON:0002421!1.88e-08!2;UBERON:0002600!1.88e-08!2;UBERON:0001894!2.05e-08!7;UBERON:0006222!2.05e-08!7;UBERON:0004732!2.98e-08!13;UBERON:0001875!4.24e-08!2;UBERON:0006514!4.24e-08!2;UBERON:0001873!1.07e-07!2;UBERON:0010122!1.07e-07!2;UBERON:0002148!1.11e-07!2;UBERON:0009662!1.11e-07!2;UBERON:0005174!9.09e-07!5;UBERON:0001137!9.09e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.09e-49;2!UBERON:0002757;1.09e-49;2!UBERON:0010134;1.09e-49;2!UBERON:0005408;1.09e-49;2!UBERON:0001899;1.09e-49;2!UBERON:0002619;4.25e-27;22!UBERON:0003296;1.84e-25;4!UBERON:0010133;1.84e-25;4!UBERON:0002784;1.84e-25;4!UBERON:0000956;5.08e-24;25!UBERON:0000203;5.08e-24;25!UBERON:0000349;7.35e-21;5!UBERON:0001872;8.54e-21;5!UBERON:0002780;3.18e-20;41!UBERON:0001890;3.18e-20;41!UBERON:0001869;1.97e-19;32!UBERON:0001950;2.74e-19;20!UBERON:0003528;3.70e-18;34!UBERON:0002020;3.70e-18;34!UBERON:0001893;5.45e-18;34!UBERON:0002791;5.51e-18;32!UBERON:0001871;4.07e-15;6!UBERON:0001894;5.04e-15;7!UBERON:0001876;8.82e-14;2!UBERON:0001954;8.82e-14;2!UBERON:0003022;8.82e-14;2!UBERON:0002421;8.82e-14;2!UBERON:0002600;8.82e-14;2!UBERON:0002771;1.29e-13;2!UBERON:0000073;1.08e-12;53!UBERON:0002616;1.08e-12;53!UBERON:0002418;1.01e-09;3!UBERON:0004755;1.01e-09;3!UBERON:0000955;5.94e-09;68!UBERON:0001017;8.20e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.09e-49,2;UBERON:0002757,1.09e-49,2;UBERON:0010134,1.09e-49,2;UBERON:0005408,1.09e-49,2;UBERON:0001899,1.09e-49,2;UBERON:0002780,9.40e-29,41;UBERON:0001890,9.40e-29,41;UBERON:0003080,9.40e-29,41;UBERON:0006240,9.40e-29,41;UBERON:0002619,4.25e-27,22;UBERON:0003296,1.84e-25,4;UBERON:0010133,1.84e-25,4;UBERON:0002784,1.84e-25,4;UBERON:0000956,5.08e-24,25;UBERON:0000203,5.08e-24,25;UBERON:0000073,2.09e-22,53;UBERON:0002616,2.09e-22,53;UBERON:0001049,3.09e-21,56;UBERON:0005068,3.09e-21,56;UBERON:0006241,3.09e-21,56;UBERON:0007135,3.09e-21,56;UBERON:0000349,7.35e-21,5;UBERON:0001872,9.93e-21,5;UBERON:0003056,1.55e-19,61;UBERON:0001950,2.68e-19,20;UBERON:0002791,5.24e-19,32;UBERON:0001869,5.24e-19,32;UBERON:0003528,6.10e-18,34;UBERON:0002020,6.10e-18,34;UBERON:0001893,6.10e-18,34;UBERON:0000955,2.58e-17,68;UBERON:0006238,2.58e-17,68;UBERON:0001871,3.53e-15,6;UBERON:0001894,5.04e-15,7;UBERON:0006222,5.04e-15,7;UBERON:0001017,1.29e-14,81;UBERON:0003075,1.29e-14,82;UBERON:0007284,1.29e-14,82;UBERON:0002346,6.03e-14,86;UBERON:0001876,8.28e-14,2;UBERON:0001954,9.40e-14,2;UBERON:0003022,9.40e-14,2;UBERON:0002421,9.40e-14,2;UBERON:0002600,9.40e-14,2;UBERON:0002771,1.07e-13,2;UBERON:0001016,3.43e-13,89;UBERON:0010371,1.47e-11,104;UBERON:0007023,1.20e-10,114;UBERON:0002418,1.01e-09,3;UBERON:0004755,1.01e-09,3;UBERON:0010314,4.06e-09,132;UBERON:0004121,6.06e-07,171;UBERON:0000924,6.06e-07,171;UBERON:0006601,6.06e-07,171 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,2.67271891179974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,5.03059922141551,0.225980740780532,0,0,0.379864775735272,0,0,0,0.19980960958213,0,0.229073192331831,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0.681017030557878,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,1.70836770862748,0.625954653532499,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0.205116364240755,0.252071696221718,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,3.12431239445539,1.03343398250592,0.19024743058172,0.546974809018219,0,0,0,0,1.60710550763486,1.68141861109412,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0.078493092850514,0.628462359664008,0,0,0,0,0.142953088353313,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,2.67271891179974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,5.03059922141551,0.225980740780532,0,0,0.379864775735272,0,0,0,0.19980960958213,0,0.229073192331831,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0.681017030557878,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,1.70836770862748,0.625954653532499,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0.205116364240755,0.252071696221718,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,3.12431239445539,1.03343398250592,0.19024743058172,0.546974809018219,0,0,0,0,1.60710550763486,1.68141861109412,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0.078493092850514,0.628462359664008,0,0,0,0,0.142953088353313,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p23@DMD | |||
}} | }} |
Latest revision as of 22:06, 24 September 2015
Short description: | p23@DMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_DMD_5end |
Coexpression cluster: | C1062_extraskeletal_pineal_amygdala_middle_medial_parietal_hippocampus |
Association with transcript: | 122bp_to_ENST00000288447_5end |
EntrezGene: | DMD |
HGNC: | 2928 |
UniProt: | Q4G0X0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.16e-26 | 1 |
extraosseous chondrosarcoma | 2.16e-26 | 1 |
myxoid chondrosarcoma | 2.16e-26 | 1 |
extraskeletal myxoid chondrosarcoma | 2.16e-26 | 1 |