FFCP PHASE1:Hg19::chr12:85410328..85410353,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144448 | |EntrezGene=144448 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31886 | |HGNC=31886 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-248bp_to_ENST00000529820_5end | |association_with_transcript=-248bp_to_ENST00000529820_5end | ||
|cluster_id=chr12:85410328..85410353,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_2_at_TSPAN19_5end | |description=CAGE_peak_2_at_TSPAN19_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002550;3.29e-07;1 | |ontology_enrichment_celltype_v019=CL:0002550;3.29e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002550,3.40e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006222;3.29e-07;1!UBERON:0006601;4.03e-07;82 | |ontology_enrichment_development_v019=UBERON:0006222;3.29e-07;1!UBERON:0006601;4.03e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5662;6.30e-07;1 | |ontology_enrichment_disease_v019=DOID:5662;6.30e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:5662,4.85e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.24e-35!57;UBERON:0005068!2.24e-35!57;UBERON:0006241!2.24e-35!57;UBERON:0007135!2.24e-35!57;UBERON:0002616!6.22e-32!59;UBERON:0002780!4.61e-31!41;UBERON:0001890!4.61e-31!41;UBERON:0006240!4.61e-31!41;UBERON:0003080!4.43e-30!42;UBERON:0000955!6.10e-28!69;UBERON:0006238!6.10e-28!69;UBERON:0003075!1.86e-25!86;UBERON:0007284!1.86e-25!86;UBERON:0003056!7.35e-25!61;UBERON:0002020!1.70e-24!34;UBERON:0003528!1.70e-24!34;UBERON:0001893!2.82e-24!34;UBERON:0001017!4.42e-24!82;UBERON:0002346!1.11e-23!90;UBERON:0000033!1.15e-23!123;UBERON:0000073!1.96e-23!94;UBERON:0001016!1.96e-23!94;UBERON:0005743!1.98e-23!86;UBERON:0002791!3.36e-23!33;UBERON:0000153!8.80e-22!129;UBERON:0007811!8.80e-22!129;UBERON:0001869!1.64e-21!32;UBERON:0004121!1.21e-19!169;UBERON:0000924!9.18e-19!173;UBERON:0006601!9.18e-19!173;UBERON:0002619!1.27e-15!22;UBERON:0001950!3.20e-15!20;UBERON:0007023!1.01e-14!115;UBERON:0002420!1.24e-14!9;UBERON:0007245!1.24e-14!9;UBERON:0010009!1.24e-14!9;UBERON:0010011!1.24e-14!9;UBERON:0000454!1.24e-14!9;UBERON:0002308!1.43e-14!9;UBERON:0000125!1.43e-14!9;UBERON:0000956!3.16e-13!25;UBERON:0000203!3.16e-13!25;UBERON:0000477!7.80e-12!286;UBERON:0009663!1.12e-11!7;UBERON:0004111!1.24e-11!241;UBERON:0000119!7.72e-11!312;UBERON:0000475!8.01e-11!365;UBERON:0000483!3.41e-10!309;UBERON:0002298!7.47e-10!8;UBERON:0000025!1.38e-09!194;UBERON:0001894!2.40e-08!7;UBERON:0006222!2.40e-08!7;UBERON:0000467!4.76e-08!625;UBERON:0000480!5.50e-08!626;UBERON:0001871!3.97e-07!7;UBERON:0000481!5.06e-07!347;UBERON:0000468!7.14e-07!659;UBERON:0003076!7.48e-07!15;UBERON:0003057!7.48e-07!15;UBERON:0000369!8.33e-07!4;UBERON:0002435!8.33e-07!4;UBERON:0000204!8.33e-07!4;UBERON:0010082!8.33e-07!4 | |ontology_enrichment_uberon=UBERON:0001049!2.24e-35!57;UBERON:0005068!2.24e-35!57;UBERON:0006241!2.24e-35!57;UBERON:0007135!2.24e-35!57;UBERON:0002616!6.22e-32!59;UBERON:0002780!4.61e-31!41;UBERON:0001890!4.61e-31!41;UBERON:0006240!4.61e-31!41;UBERON:0003080!4.43e-30!42;UBERON:0000955!6.10e-28!69;UBERON:0006238!6.10e-28!69;UBERON:0003075!1.86e-25!86;UBERON:0007284!1.86e-25!86;UBERON:0003056!7.35e-25!61;UBERON:0002020!1.70e-24!34;UBERON:0003528!1.70e-24!34;UBERON:0001893!2.82e-24!34;UBERON:0001017!4.42e-24!82;UBERON:0002346!1.11e-23!90;UBERON:0000033!1.15e-23!123;UBERON:0000073!1.96e-23!94;UBERON:0001016!1.96e-23!94;UBERON:0005743!1.98e-23!86;UBERON:0002791!3.36e-23!33;UBERON:0000153!8.80e-22!129;UBERON:0007811!8.80e-22!129;UBERON:0001869!1.64e-21!32;UBERON:0004121!1.21e-19!169;UBERON:0000924!9.18e-19!173;UBERON:0006601!9.18e-19!173;UBERON:0002619!1.27e-15!22;UBERON:0001950!3.20e-15!20;UBERON:0007023!1.01e-14!115;UBERON:0002420!1.24e-14!9;UBERON:0007245!1.24e-14!9;UBERON:0010009!1.24e-14!9;UBERON:0010011!1.24e-14!9;UBERON:0000454!1.24e-14!9;UBERON:0002308!1.43e-14!9;UBERON:0000125!1.43e-14!9;UBERON:0000956!3.16e-13!25;UBERON:0000203!3.16e-13!25;UBERON:0000477!7.80e-12!286;UBERON:0009663!1.12e-11!7;UBERON:0004111!1.24e-11!241;UBERON:0000119!7.72e-11!312;UBERON:0000475!8.01e-11!365;UBERON:0000483!3.41e-10!309;UBERON:0002298!7.47e-10!8;UBERON:0000025!1.38e-09!194;UBERON:0001894!2.40e-08!7;UBERON:0006222!2.40e-08!7;UBERON:0000467!4.76e-08!625;UBERON:0000480!5.50e-08!626;UBERON:0001871!3.97e-07!7;UBERON:0000481!5.06e-07!347;UBERON:0000468!7.14e-07!659;UBERON:0003076!7.48e-07!15;UBERON:0003057!7.48e-07!15;UBERON:0000369!8.33e-07!4;UBERON:0002435!8.33e-07!4;UBERON:0000204!8.33e-07!4;UBERON:0010082!8.33e-07!4 | ||
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| ||
|short_description=p2@TSPAN19 | |short_description=p2@TSPAN19 | ||
}} | }} |
Latest revision as of 03:44, 25 September 2015
Short description: | p2@TSPAN19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TSPAN19_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -248bp_to_ENST00000529820_5end |
EntrezGene: | TSPAN19 |
HGNC: | 31886 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of the conjuctiva | 3.40e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 4.85e-07 | 1 |