FFCP PHASE1:Hg19::chr7:110731476..110731516,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54674 | |EntrezGene=54674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17200 | |HGNC=17200 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=326bp_to_ENST00000464835_5end | |association_with_transcript=326bp_to_ENST00000464835_5end | ||
|cluster_id=chr7:110731476..110731516,+ | |||
|coexpression_cluster_id=C1605 | |||
|description=CAGE_peak_3_at_LRRN3_5end | |description=CAGE_peak_3_at_LRRN3_5end | ||
|id=chr7:110731476..110731516,+ | |id=chr7:110731476..110731516,+ | ||
|ontology_enrichment_celltype=CL:0000625!1.07e-07!11 | |ontology_enrichment_celltype=CL:0000625!1.07e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000625;8.69e-13;11!CL:0000791;1.45e-07;18!CL:0000789;1.45e-07;18!CL:0002419;1.45e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.69e-13,11;CL:0000791,1.01e-07,18;CL:0000789,1.01e-07,18;CL:0002420,1.01e-07,18;CL:0002419,1.01e-07,18;CL:0000790,1.01e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.30e-12;3!UBERON:0010122;9.31e-09;2!CL:0000790;1.45e-07;18!UBERON:0006601;2.28e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.07e-48!57;UBERON:0005068!8.07e-48!57;UBERON:0006241!8.07e-48!57;UBERON:0007135!8.07e-48!57;UBERON:0002020!6.30e-42!34;UBERON:0003528!6.30e-42!34;UBERON:0001893!1.77e-41!34;UBERON:0002616!1.78e-41!59;UBERON:0002780!2.48e-41!41;UBERON:0001890!2.48e-41!41;UBERON:0006240!2.48e-41!41;UBERON:0002791!2.76e-40!33;UBERON:0001869!3.56e-40!32;UBERON:0003080!5.00e-40!42;UBERON:0001017!2.43e-36!82;UBERON:0000955!3.35e-34!69;UBERON:0006238!3.35e-34!69;UBERON:0005743!8.60e-34!86;UBERON:0000073!1.67e-32!94;UBERON:0001016!1.67e-32!94;UBERON:0003075!5.40e-32!86;UBERON:0007284!5.40e-32!86;UBERON:0000956!2.41e-31!25;UBERON:0000203!2.41e-31!25;UBERON:0002346!5.34e-31!90;UBERON:0002619!5.21e-29!22;UBERON:0007023!8.97e-28!115;UBERON:0003056!2.76e-27!61;UBERON:0001950!6.99e-27!20;UBERON:0000153!1.22e-23!129;UBERON:0007811!1.22e-23!129;UBERON:0000033!1.53e-21!123;UBERON:0004121!1.60e-17!169;UBERON:0000924!2.36e-17!173;UBERON:0006601!2.36e-17!173;UBERON:0002420!2.84e-12!9;UBERON:0007245!2.84e-12!9;UBERON:0010009!2.84e-12!9;UBERON:0010011!2.84e-12!9;UBERON:0000454!2.84e-12!9;UBERON:0002308!7.18e-12!9;UBERON:0000125!7.18e-12!9;UBERON:0001871!2.36e-11!7;UBERON:0009663!8.17e-10!7;UBERON:0003076!3.48e-09!15;UBERON:0003057!3.48e-09!15;UBERON:0000200!9.19e-09!6;UBERON:0004733!3.44e-08!12;UBERON:0002028!3.44e-08!12;UBERON:0007277!3.44e-08!12;UBERON:0002021!1.12e-07!5;UBERON:0002298!1.79e-07!8;UBERON:0004732!2.20e-07!13;UBERON:0000349!2.45e-07!5;UBERON:0001872!2.72e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.72e-47;32!UBERON:0002791;2.66e-43;32!UBERON:0001893;8.06e-41;34!UBERON:0001950;1.20e-40;20!UBERON:0003528;8.63e-38;34!UBERON:0002020;8.63e-38;34!UBERON:0002619;8.46e-37;22!UBERON:0000956;3.87e-32;25!UBERON:0000203;3.87e-32;25!UBERON:0002780;1.80e-29;41!UBERON:0001890;1.80e-29;41!UBERON:0000073;9.70e-25;53!UBERON:0002616;9.70e-25;53!UBERON:0002420;6.63e-21;9!UBERON:0007245;6.63e-21;9!UBERON:0010009;6.63e-21;9!UBERON:0010011;6.63e-21;9!UBERON:0000454;6.63e-21;9!UBERON:0000955;2.26e-17;68!UBERON:0001017;2.50e-17;75!UBERON:0000369;3.94e-16;4!UBERON:0002435;3.94e-16;4!UBERON:0000204;3.94e-16;4!UBERON:0001871;2.67e-14;6!UBERON:0009663;2.67e-14;7!UBERON:0001016;5.24e-14;83!UBERON:0001870;1.53e-13;3!UBERON:0002021;2.35e-13;5!UBERON:0005383;1.30e-12;3!UBERON:0005382;1.30e-12;3!UBERON:0000200;1.71e-11;6!UBERON:0000125;4.61e-11;9!UBERON:0002308;4.61e-11;9!UBERON:0002702;1.09e-09;2!UBERON:0001876;9.31e-09;2!UBERON:0001873;9.31e-09;2!UBERON:0004733;4.87e-08;12!UBERON:0002028;4.87e-08;12!UBERON:0001872;5.01e-08;5!UBERON:0000349;1.47e-07;5!UBERON:0007023;1.66e-07;114!UBERON:0004732;2.13e-07;13!UBERON:0002680;3.22e-07;9!UBERON:0001895;3.22e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.25e-49,32;UBERON:0000073,4.37e-48,53;UBERON:0002616,4.37e-48,53;UBERON:0001893,2.98e-46,34;UBERON:0001049,3.33e-45,56;UBERON:0005068,3.33e-45,56;UBERON:0006241,3.33e-45,56;UBERON:0007135,3.33e-45,56;UBERON:0002791,8.25e-45,32;UBERON:0003528,5.80e-42,34;UBERON:0002020,5.80e-42,34;UBERON:0002780,1.87e-41,41;UBERON:0001890,1.87e-41,41;UBERON:0003080,1.87e-41,41;UBERON:0006240,1.87e-41,41;UBERON:0001950,1.33e-40,20;UBERON:0000955,1.38e-38,68;UBERON:0006238,1.38e-38,68;UBERON:0002619,9.28e-37,22;UBERON:0001017,4.78e-34,81;UBERON:0000956,4.20e-32,25;UBERON:0000203,4.20e-32,25;UBERON:0001016,5.01e-30,89;UBERON:0003075,5.77e-29,82;UBERON:0007284,5.77e-29,82;UBERON:0002346,2.49e-27,86;UBERON:0003056,2.57e-26,61;UBERON:0010371,1.61e-21,104;UBERON:0002420,3.84e-21,9;UBERON:0007245,3.84e-21,9;UBERON:0010009,3.84e-21,9;UBERON:0010011,3.84e-21,9;UBERON:0000454,3.84e-21,9;UBERON:0010314,4.64e-17,132;UBERON:0000369,2.60e-16,4;UBERON:0002435,2.60e-16,4;UBERON:0000204,2.60e-16,4;UBERON:0010082,2.60e-16,4;UBERON:0007023,5.84e-16,114;UBERON:0009663,1.96e-14,7;UBERON:0001871,2.76e-14,6;UBERON:0004121,9.78e-14,171;UBERON:0000924,9.78e-14,171;UBERON:0006601,9.78e-14,171;UBERON:0002021,1.77e-13,5;UBERON:0001870,2.24e-13,3;UBERON:0005383,5.55e-13,3;UBERON:0005382,5.55e-13,3;UBERON:0000200,2.57e-11,6;UBERON:0000125,3.65e-11,9;UBERON:0002308,3.65e-11,9;UBERON:0011216,7.27e-10,223;UBERON:0002702,1.35e-09,2;UBERON:0001873,4.51e-09,2;UBERON:0010122,4.51e-09,2;UBERON:0001876,7.04e-09,2;UBERON:0000025,7.73e-09,192;UBERON:0004733,4.24e-08,12;UBERON:0002028,4.24e-08,12;UBERON:0007277,4.24e-08,12;UBERON:0001872,5.27e-08,5;UBERON:0000349,1.60e-07,5;UBERON:0004732,1.88e-07,13;UBERON:0002680,3.10e-07,9;UBERON:0001895,3.10e-07,9;UBERON:0010092,3.10e-07,9 | |||
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|short_description=p3@LRRN3 | |short_description=p3@LRRN3 | ||
}} | }} |
Latest revision as of 03:45, 25 September 2015
Short description: | p3@LRRN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRN3_5end |
Coexpression cluster: | C1605_CD4_temporal_occipital_duodenum_Neural_mycosis_medial |
Association with transcript: | 326bp_to_ENST00000464835_5end |
EntrezGene: | LRRN3 |
HGNC: | 17200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.69e-13 | 11 |
mature alpha-beta T cell | 1.01e-07 | 18 |
alpha-beta T cell | 1.01e-07 | 18 |
immature T cell | 1.01e-07 | 18 |
mature T cell | 1.01e-07 | 18 |
immature alpha-beta T cell | 1.01e-07 | 18 |