FFCP PHASE1:Hg19::chr1:101003687..101003720,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:101003687..101003720,+ to FFCP PHASE1:Hg19::chr1:101003687..101003720,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54112 | |EntrezGene=54112 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4539 | |HGNC=4539 | ||
|TSSclassifier=strong | |||
|UniProt=Q9GZN0 | |UniProt=Q9GZN0 | ||
|association_with_transcript=0bp_to_ENST00000315033_5end | |||
|cluster_id=chr1:101003687..101003720,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_1_at_GPR88_5end | |||
|id=chr1:101003687..101003720,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000135;5.15e-07;3!CL:0000388;5.15e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,5.16e-07,3;CL:0000388,5.16e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;6.84e-11;2!UBERON:0006601;2.44e-09;82!UBERON:0006241;9.62e-07;3!UBERON:0003057;9.62e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.63e-58!115;UBERON:0001049!1.67e-46!57;UBERON:0005068!1.67e-46!57;UBERON:0006241!1.67e-46!57;UBERON:0007135!1.67e-46!57;UBERON:0002780!6.01e-43!41;UBERON:0001890!6.01e-43!41;UBERON:0006240!6.01e-43!41;UBERON:0001017!3.50e-42!82;UBERON:0003080!1.05e-41!42;UBERON:0005743!1.23e-41!86;UBERON:0000073!5.04e-38!94;UBERON:0001016!5.04e-38!94;UBERON:0002616!3.10e-37!59;UBERON:0001893!1.27e-36!34;UBERON:0002020!1.94e-36!34;UBERON:0003528!1.94e-36!34;UBERON:0001869!3.49e-36!32;UBERON:0000955!6.11e-36!69;UBERON:0006238!6.11e-36!69;UBERON:0002791!3.67e-35!33;UBERON:0003075!4.96e-34!86;UBERON:0007284!4.96e-34!86;UBERON:0002346!8.53e-34!90;UBERON:0003056!1.08e-27!61;UBERON:0002619!3.27e-27!22;UBERON:0001950!1.31e-23!20;UBERON:0000956!2.09e-23!25;UBERON:0000203!2.09e-23!25;UBERON:0000153!2.30e-20!129;UBERON:0007811!2.30e-20!129;UBERON:0000033!1.24e-19!123;UBERON:0000924!3.47e-19!173;UBERON:0006601!3.47e-19!173;UBERON:0004121!6.60e-19!169;UBERON:0002420!1.05e-15!9;UBERON:0007245!1.05e-15!9;UBERON:0010009!1.05e-15!9;UBERON:0010011!1.05e-15!9;UBERON:0000454!1.05e-15!9;UBERON:0002308!5.79e-15!9;UBERON:0000125!5.79e-15!9;UBERON:0000025!5.26e-12!194;UBERON:0009663!6.43e-12!7;UBERON:0001871!1.47e-11!7;UBERON:0000349!2.38e-11!5;UBERON:0000369!5.64e-10!4;UBERON:0002435!5.64e-10!4;UBERON:0000204!5.64e-10!4;UBERON:0010082!5.64e-10!4;UBERON:0005174!8.78e-10!5;UBERON:0001137!8.78e-10!5;UBERON:0000477!4.42e-09!286;UBERON:0004111!6.60e-09!241;UBERON:0005383!6.51e-08!3;UBERON:0005382!6.51e-08!3;UBERON:0000481!7.60e-08!347;UBERON:0001894!1.21e-07!7;UBERON:0006222!1.21e-07!7;UBERON:0000475!1.46e-07!365;UBERON:0000200!2.11e-07!6;UBERON:0000483!2.79e-07!309;UBERON:0000119!4.40e-07!312;UBERON:0000922!4.47e-07!612;UBERON:0003076!4.56e-07!15;UBERON:0003057!4.56e-07!15;UBERON:0000923!5.54e-07!604;UBERON:0005291!5.54e-07!604;UBERON:0006598!5.54e-07!604;UBERON:0002532!5.54e-07!604;UBERON:0002050!6.18e-07!605;UBERON:0005423!6.18e-07!605;UBERON:0002240!8.92e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002420;5.22e-33;9!UBERON:0007245;5.22e-33;9!UBERON:0010009;5.22e-33;9!UBERON:0010011;5.22e-33;9!UBERON:0000454;5.22e-33;9!UBERON:0002780;1.02e-32;41!UBERON:0001890;1.02e-32;41!UBERON:0002791;6.49e-27;32!UBERON:0001893;2.04e-26;34!UBERON:0001869;3.77e-26;32!UBERON:0009663;1.05e-24;7!UBERON:0000349;6.72e-23;5!UBERON:0003528;1.95e-22;34!UBERON:0002020;1.95e-22;34!UBERON:0000073;6.52e-22;53!UBERON:0002616;6.52e-22;53!UBERON:0000369;6.50e-20;4!UBERON:0002435;6.50e-20;4!UBERON:0000204;6.50e-20;4!UBERON:0000125;4.51e-19;9!UBERON:0002308;4.51e-19;9!UBERON:0001017;1.19e-17;75!UBERON:0000955;3.33e-17;68!UBERON:0005383;2.03e-15;3!UBERON:0005382;2.03e-15;3!UBERON:0002619;2.43e-14;22!UBERON:0001016;8.42e-14;83!UBERON:0000956;1.68e-12;25!UBERON:0000203;1.68e-12;25!UBERON:0002784;5.97e-11;4!UBERON:0001894;6.77e-11;7!UBERON:0001873;6.84e-11;2!UBERON:0001875;8.88e-11;2!UBERON:0006514;8.88e-11;2!UBERON:0001897;1.46e-10;2!UBERON:0010225;1.46e-10;2!UBERON:0001871;1.88e-10;6!UBERON:0001876;4.03e-10;2!UBERON:0002360;4.52e-10;2!UBERON:0000094;4.52e-10;2!UBERON:0010743;4.52e-10;2!UBERON:0001954;5.07e-10;2!UBERON:0003022;5.07e-10;2!UBERON:0002421;5.07e-10;2!UBERON:0002600;5.07e-10;2!UBERON:0001950;1.18e-09;20!UBERON:0007023;9.16e-09;114!UBERON:0011216;3.39e-07;132!UBERON:0007846;5.15e-07;3!UBERON:0000043;5.15e-07;3!UBERON:0007845;5.15e-07;3!UBERON:0002106;6.85e-07;3!UBERON:0002240;9.62e-07;3!UBERON:0005174;9.62e-07;3!UBERON:0001137;9.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.66e-40,81;UBERON:0002780,2.39e-39,41;UBERON:0001890,2.39e-39,41;UBERON:0003080,2.39e-39,41;UBERON:0006240,2.39e-39,41;UBERON:0001049,2.71e-37,56;UBERON:0005068,2.71e-37,56;UBERON:0006241,2.71e-37,56;UBERON:0007135,2.71e-37,56;UBERON:0001016,2.77e-35,89;UBERON:0002420,5.13e-33,9;UBERON:0007245,5.13e-33,9;UBERON:0010009,5.13e-33,9;UBERON:0010011,5.13e-33,9;UBERON:0000454,5.13e-33,9;UBERON:0000073,7.47e-33,53;UBERON:0002616,7.47e-33,53;UBERON:0001893,3.74e-30,34;UBERON:0000955,1.34e-29,68;UBERON:0006238,1.34e-29,68;UBERON:0002346,2.40e-29,86;UBERON:0003075,1.68e-28,82;UBERON:0007284,1.68e-28,82;UBERON:0002791,2.90e-28,32;UBERON:0001869,2.90e-28,32;UBERON:0003056,9.74e-28,61;UBERON:0007023,7.55e-27,114;UBERON:0003528,1.89e-26,34;UBERON:0002020,1.89e-26,34;UBERON:0009663,1.07e-24,7;UBERON:0000349,6.44e-23,5;UBERON:0010371,2.74e-21,104;UBERON:0000369,6.51e-20,4;UBERON:0002435,6.51e-20,4;UBERON:0000204,6.51e-20,4;UBERON:0010082,6.51e-20,4;UBERON:0004121,1.23e-19,171;UBERON:0000924,1.23e-19,171;UBERON:0006601,1.23e-19,171;UBERON:0000125,4.59e-19,9;UBERON:0002308,4.59e-19,9;UBERON:0010314,1.07e-18,132;UBERON:0011216,2.79e-18,223;UBERON:0005383,2.03e-15,3;UBERON:0005382,2.03e-15,3;UBERON:0002619,2.63e-14,22;UBERON:0000956,1.79e-12,25;UBERON:0000203,1.79e-12,25;UBERON:0001873,6.85e-11,2;UBERON:0010122,6.85e-11,2;UBERON:0002784,6.95e-11,4;UBERON:0001894,7.60e-11,7;UBERON:0006222,7.60e-11,7;UBERON:0001875,9.11e-11,2;UBERON:0006514,9.11e-11,2;UBERON:0001897,1.46e-10,2;UBERON:0010225,1.46e-10,2;UBERON:0001871,1.84e-10,6;UBERON:0001876,3.86e-10,2;UBERON:0002360,4.04e-10,2;UBERON:0000094,4.04e-10,2;UBERON:0010743,4.04e-10,2;UBERON:0001954,5.07e-10,2;UBERON:0003022,5.07e-10,2;UBERON:0002421,5.07e-10,2;UBERON:0002600,5.07e-10,2;UBERON:0000025,6.33e-10,192;UBERON:0001950,1.26e-09,20;UBERON:0007846,5.16e-07,3;UBERON:0000043,5.16e-07,3;UBERON:0007845,5.16e-07,3;UBERON:0002106,5.48e-07,3;UBERON:0004854,5.48e-07,3;UBERON:0009034,5.48e-07,3;UBERON:0002095,5.48e-07,3;UBERON:0004782,5.48e-07,3;UBERON:0003281,5.48e-07,3;UBERON:0009664,5.48e-07,3;UBERON:0002296,5.48e-07,3;UBERON:0005602,5.48e-07,3;UBERON:0001179,5.48e-07,3;UBERON:0006293,5.48e-07,3;UBERON:0004111,8.10e-07,240 | |||
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| ||
|short_description=p1@GPR88 | |||
}} | }} |
Latest revision as of 04:45, 25 September 2015
Short description: | p1@GPR88 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPR88_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000315033_5end |
EntrezGene: | GPR88 |
HGNC: | 4539 |
UniProt: | Q9GZN0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 5.16e-07 | 3 |
tendon cell | 5.16e-07 | 3 |