FFCP PHASE1:Hg19::chr1:104068562..104068632,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:104068562..104068632,+
|short_description=p2@RNPC3
|description=CAGE_peak_2_at_RNPC3_5end
|association_with_transcript=0bp_to_ENST00000423855,NM_017619,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55599 | |EntrezGene=55599 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18666 | |HGNC=18666 | ||
|TSSclassifier=strong | |||
|UniProt=Q96LT9 | |UniProt=Q96LT9 | ||
|association_with_transcript=0bp_to_ENST00000423855,NM_017619,uc010oul.1,uc010oum.1,uc010oun.1_5end | |||
|cluster_id=chr1:104068562..104068632,+ | |||
|coexpression_cluster_id=C1025 | |||
|description=CAGE_peak_2_at_RNPC3_5end | |||
|id=chr1:104068562..104068632,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.36e-28!172;CL:0000566!6.36e-28!172;CL:0000738!9.93e-28!140;CL:0002032!2.45e-25!165;CL:0000837!2.45e-25!165;CL:0002031!3.98e-23!124;CL:0000988!6.22e-23!182;CL:0002087!1.20e-21!119;CL:0000763!1.31e-13!112;CL:0000049!1.31e-13!112;CL:0000766!1.14e-12!76;CL:0000557!2.05e-12!71;CL:0000838!7.80e-12!52;CL:0000542!8.96e-12!53;CL:0000051!8.96e-12!53;CL:0000839!4.18e-11!70;CL:0002057!3.61e-10!42;CL:0000860!4.57e-10!45;CL:0002009!7.65e-10!65;CL:0002194!2.72e-09!63;CL:0000576!2.72e-09!63;CL:0000040!2.72e-09!63;CL:0000559!2.72e-09!63;CL:0000791!8.20e-09!18;CL:0000789!8.20e-09!18;CL:0002420!8.20e-09!18;CL:0002419!8.20e-09!18;CL:0000790!8.20e-09!18;CL:0000084!8.68e-07!25;CL:0000827!8.68e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.40e-09;18!CL:0000789;7.40e-09;18!CL:0002419;7.40e-09;18!CL:0000860;2.20e-08;33!CL:0002057;2.20e-08;33!CL:0002087;1.27e-07;104!CL:0000576;3.18e-07;48!CL:0000542;4.74e-07;53!CL:0000473;6.88e-07;39!CL:0000234;6.88e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.61e-28,168;CL:0000738,2.97e-28,136;CL:0002032,1.05e-25,161;CL:0000837,1.05e-25,161;CL:0000988,8.96e-24,177;CL:0002031,1.25e-23,120;CL:0002087,3.86e-22,115;CL:0000763,6.49e-14,108;CL:0000049,6.49e-14,108;CL:0000766,3.90e-13,72;CL:0000557,6.59e-13,67;CL:0000838,7.79e-12,52;CL:0000542,8.95e-12,53;CL:0000051,8.95e-12,53;CL:0000839,1.53e-11,66;CL:0002009,2.97e-10,61;CL:0000860,3.61e-10,42;CL:0002057,3.61e-10,42;CL:0000473,8.62e-10,48;CL:0000234,8.62e-10,48;CL:0002194,1.09e-09,59;CL:0000576,1.09e-09,59;CL:0000040,1.09e-09,59;CL:0000559,1.09e-09,59;CL:0000791,8.19e-09,18;CL:0000789,8.19e-09,18;CL:0002420,8.19e-09,18;CL:0002419,8.19e-09,18;CL:0000790,8.19e-09,18;CL:0000084,8.67e-07,25;CL:0000827,8.67e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;7.40e-09;18!CL:0002057;1.83e-07;42!CL:0000051;4.74e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-26!115;UBERON:0002390!2.14e-16!102;UBERON:0003061!2.14e-16!102;UBERON:0001049!3.94e-15!57;UBERON:0005068!3.94e-15!57;UBERON:0006241!3.94e-15!57;UBERON:0007135!3.94e-15!57;UBERON:0002193!6.28e-15!112;UBERON:0003080!5.95e-14!42;UBERON:0002780!9.43e-14!41;UBERON:0001890!9.43e-14!41;UBERON:0006240!9.43e-14!41;UBERON:0002616!1.57e-12!59;UBERON:0001017!1.53e-11!82;UBERON:0000955!3.02e-11!69;UBERON:0006238!3.02e-11!69;UBERON:0002020!4.50e-11!34;UBERON:0003528!4.50e-11!34;UBERON:0001893!8.77e-11!34;UBERON:0002791!9.70e-11!33;UBERON:0000073!1.60e-10!94;UBERON:0001016!1.60e-10!94;UBERON:0002371!2.48e-10!80;UBERON:0005743!2.90e-10!86;UBERON:0001869!5.25e-10!32;UBERON:0001474!1.14e-09!86;UBERON:0002619!1.34e-08!22;UBERON:0001950!1.12e-07!20;UBERON:0003075!1.35e-07!86;UBERON:0007284!1.35e-07!86;UBERON:0002346!1.60e-07!90;UBERON:0000956!2.82e-07!25;UBERON:0000203!2.82e-07!25;UBERON:0004765!6.32e-07!101;UBERON:0001434!6.32e-07!101;UBERON:0002405!7.00e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.78e-10;41!UBERON:0001890;1.78e-10;41!UBERON:0002791;1.70e-09;32!UBERON:0003528;1.79e-09;34!UBERON:0002020;1.79e-09;34!UBERON:0001869;3.56e-09;32!UBERON:0001893;3.65e-09;34!UBERON:0002619;9.87e-09;22!UBERON:0000073;1.93e-08;53!UBERON:0002616;1.93e-08;53!UBERON:0001950;8.87e-08;20!UBERON:0007023;1.17e-07;114!UBERON:0000956;2.72e-07;25!UBERON:0000203;2.72e-07;25 | |||
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| ||
|short_description=p2@RNPC3 | |||
}} | }} |
Latest revision as of 06:36, 25 September 2015
Short description: | p2@RNPC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNPC3_5end |
Coexpression cluster: | C1025_Mast_lung_pineal_pituitary_cerebellum_Neutrophils_CD14 |
Association with transcript: | 0bp_to_ENST00000423855, NM_017619, uc010oul.1, uc010oum.1, uc010oun.1_5end |
EntrezGene: | RNPC3 |
HGNC: | 18666 |
UniProt: | Q96LT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.40e-26 | 114 |
hematopoietic system | 7.86e-17 | 98 |
blood island | 7.86e-17 | 98 |
hemolymphoid system | 2.94e-15 | 108 |
neural tube | 6.41e-15 | 56 |
neural rod | 6.41e-15 | 56 |
future spinal cord | 6.41e-15 | 56 |
neural keel | 6.41e-15 | 56 |
regional part of forebrain | 9.41e-14 | 41 |
forebrain | 9.41e-14 | 41 |
anterior neural tube | 9.41e-14 | 41 |
future forebrain | 9.41e-14 | 41 |
regional part of nervous system | 9.52e-14 | 53 |
regional part of brain | 9.52e-14 | 53 |
nervous system | 1.55e-11 | 89 |
central nervous system | 2.44e-11 | 81 |
brain grey matter | 4.49e-11 | 34 |
gray matter | 4.49e-11 | 34 |
immune system | 4.54e-11 | 93 |
brain | 4.84e-11 | 68 |
future brain | 4.84e-11 | 68 |
telencephalon | 8.75e-11 | 34 |
bone marrow | 1.15e-10 | 76 |
regional part of telencephalon | 2.06e-10 | 32 |
cerebral hemisphere | 5.25e-10 | 32 |
bone element | 6.00e-10 | 82 |
regional part of cerebral cortex | 1.34e-08 | 22 |
neural plate | 9.81e-08 | 82 |
presumptive neural plate | 9.81e-08 | 82 |
neocortex | 1.12e-07 | 20 |
neurectoderm | 1.20e-07 | 86 |
cerebral cortex | 2.81e-07 | 25 |
pallium | 2.81e-07 | 25 |
skeletal element | 3.59e-07 | 90 |