FFCP PHASE1:Mm9::chr11:77306696..77306715,+: Difference between revisions
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{{FFCP|EntrezGene=216963|HGNC=|MCL_coexpression_id=1|UniProt=Q68FF6|association_with_transcript=-198bp_to_NM_001004144,uc007kgy.1_5end|description=CAGE_peak_5_at_Git1_5end|id=chr11:77306696..77306715,+|ontology_enrichment_celltype=CL:0000117!7.38e-13!23;CL:0000337!7.38e-13!23;CL:0000221!1.47e-10!44;CL:0000133!1.47e-10!44;CL:0002319!3.54e-10!43;CL:0000540!5.78e-10!33;CL:0000047!5.78e-10!33;CL:0000031!5.78e-10!33;CL:0000404!5.78e-10!33;CL:0000055!5.69e-07!50;CL:0000393!6.83e-07!39;CL:0000211!6.83e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.60e-23,23;CL:0000337,3.60e-23,23;CL:0000540,2.00e-14,33;CL:0000047,2.00e-14,33;CL:0000031,2.00e-14,33;CL:0000404,2.00e-14,33;CL:0000221,6.87e-13,44;CL:0000133,6.87e-13,44;CL:0002319,3.83e-12,43;CL:0000393,2.28e-11,39;CL:0000211,2.28e-11,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.12e-26!75;UBERON:0001016!5.12e-26!75;UBERON:0001017!6.29e-26!73;UBERON:0005743!6.29e-26!73;UBERON:0000033!9.17e-25!63;UBERON:0001049!5.25e-24!52;UBERON:0005068!5.25e-24!52;UBERON:0006241!5.25e-24!52;UBERON:0007135!5.25e-24!52;UBERON:0004121!8.25e-24!102;UBERON:0000924!8.25e-24!102;UBERON:0006601!8.25e-24!102;UBERON:0000955!4.47e-23!50;UBERON:0006238!4.47e-23!50;UBERON:0002616!1.70e-22!49;UBERON:0002346!2.98e-21!71;UBERON:0003075!2.98e-21!71;UBERON:0007284!2.98e-21!71;UBERON:0003056!8.50e-19!49;UBERON:0002020!7.33e-18!34;UBERON:0003080!2.33e-17!40;UBERON:0002780!9.66e-17!39;UBERON:0001890!9.66e-17!39;UBERON:0006240!9.66e-17!39;UBERON:0002791!5.37e-15!29;UBERON:0003528!5.37e-15!29;UBERON:0001893!5.37e-15!29;UBERON:0007811!5.08e-14!86;UBERON:0000153!1.10e-12!94;UBERON:0000956!2.35e-10!21;UBERON:0001869!2.35e-10!21;UBERON:0000203!2.35e-10!21;UBERON:0002619!4.86e-09!17;UBERON:0002021!3.35e-08!10;UBERON:0000411!3.35e-08!10;UBERON:0001950!3.35e-08!10;UBERON:0004111!1.52e-07!122;UBERON:0000025!2.69e-07!114;UBERON:0003076!2.78e-07!12;UBERON:0003057!2.78e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.44e-45,54;UBERON:0001017,7.29e-42,73;UBERON:0001049,8.47e-42,52;UBERON:0005068,8.47e-42,52;UBERON:0006241,8.47e-42,52;UBERON:0007135,8.47e-42,52;UBERON:0001016,2.05e-40,75;UBERON:0002020,2.52e-35,34;UBERON:0000955,6.12e-35,47;UBERON:0006238,6.12e-35,47;UBERON:0002616,1.13e-33,46;UBERON:0002346,1.36e-33,64;UBERON:0003075,1.36e-33,64;UBERON:0007284,1.36e-33,64;UBERON:0004121,4.10e-32,95;UBERON:0000924,4.10e-32,95;UBERON:0006601,4.10e-32,95;UBERON:0010371,1.51e-29,73;UBERON:0003080,1.17e-28,40;UBERON:0003528,1.40e-28,29;UBERON:0002791,1.40e-28,29;UBERON:0001893,1.40e-28,29;UBERON:0002780,2.72e-27,39;UBERON:0001890,2.72e-27,39;UBERON:0006240,2.72e-27,39;UBERON:0003056,2.13e-23,49;UBERON:0010314,4.27e-21,92;UBERON:0000956,8.01e-18,21;UBERON:0001869,8.01e-18,21;UBERON:0000203,8.01e-18,21;UBERON:0002619,1.76e-17,17;UBERON:0002021,1.87e-17,10;UBERON:0000411,1.87e-17,10;UBERON:0001950,1.87e-17,10;UBERON:0000025,4.12e-13,114;UBERON:0003076,4.16e-13,12;UBERON:0003057,4.16e-13,12;UBERON:0004111,2.45e-12,122;UBERON:0002420,3.90e-12,8;UBERON:0007245,3.90e-12,8;UBERON:0010009,3.90e-12,8;UBERON:0010011,3.90e-12,8;UBERON:0000454,3.90e-12,8;UBERON:0002240,5.32e-09,6;UBERON:0005174,5.32e-09,6;UBERON:0001137,5.32e-09,6;UBERON:0011216,1.22e-08,194;UBERON:0000369,2.04e-08,5;UBERON:0002435,2.04e-08,5;UBERON:0000204,2.04e-08,5;UBERON:0010082,2.04e-08,5;UBERON:0001948,8.08e-08,5;UBERON:0002315,8.08e-08,5|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0,0,0,0.422366166455,0.234064526321993,0.171217968225505,0.239316476986009,0,0,0,0,0,0.630924330716475,0.137114433605739,0,1.27564935226605,0.0992909512008853,0.522399578277871,0,0,0,0,0,0.380046838912748,0,0,0,1.23012957516914,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,2.34717403304412,0.872100625521786,0.439372365468944,0,0.279972843250725,1.43752564364972,0,0.725362142011344,0,0,0,0,2.42779753031517,3.70293685490423,4.43681982454325,1.0165335962074,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.829516898467821,2.29510095163874,0.420649922702764,3.99911378165325,4.63823935998388,1.34739879136449,1.82106394934649,0.919218786610021,8.8092704799511,6.12899222808901,3.84016333140609,4.74790635828698,4.66586982372289,5.2091337055676,3.62937898701795,4.50210088025344,2.44477196442896,2.65165726926301,2.84743361598206,3.35519002485541,0.605809546665472,0.302286240427142,0.289864488701678,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0,0.301445281105245,0.587943535678524,0.125666591329675,0.247194967734374,0,0.884610551949874,0.485300549842228,0,0,0,1.75668478206928,1.46612694769419,0,0.718890747035522,0,0.381210681219194,4.04434726393021,2.74500361691176,3.76963056338593,7.12679712788333,6.64860189058859,3.74018480207208,4.70499662896497,0.509196819251581,0.248813941220186,0,0.420883711772948,0.650602214813519,0.459804208866946,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216963 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q68FF6 | |||
|association_with_transcript=-198bp_to_NM_001004144,uc007kgy.1_5end | |||
|cluster_id=chr11:77306696..77306715,+ | |||
|description=CAGE_peak_5_at_Git1_5end | |||
|id=chr11:77306696..77306715,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.38e-13!23;CL:0000337!7.38e-13!23;CL:0000221!1.47e-10!44;CL:0000133!1.47e-10!44;CL:0002319!3.54e-10!43;CL:0000540!5.78e-10!33;CL:0000047!5.78e-10!33;CL:0000031!5.78e-10!33;CL:0000404!5.78e-10!33;CL:0000055!5.69e-07!50;CL:0000393!6.83e-07!39;CL:0000211!6.83e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.60e-23,23;CL:0000337,3.60e-23,23;CL:0000540,2.00e-14,33;CL:0000047,2.00e-14,33;CL:0000031,2.00e-14,33;CL:0000404,2.00e-14,33;CL:0000221,6.87e-13,44;CL:0000133,6.87e-13,44;CL:0002319,3.83e-12,43;CL:0000393,2.28e-11,39;CL:0000211,2.28e-11,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.12e-26!75;UBERON:0001016!5.12e-26!75;UBERON:0001017!6.29e-26!73;UBERON:0005743!6.29e-26!73;UBERON:0000033!9.17e-25!63;UBERON:0001049!5.25e-24!52;UBERON:0005068!5.25e-24!52;UBERON:0006241!5.25e-24!52;UBERON:0007135!5.25e-24!52;UBERON:0004121!8.25e-24!102;UBERON:0000924!8.25e-24!102;UBERON:0006601!8.25e-24!102;UBERON:0000955!4.47e-23!50;UBERON:0006238!4.47e-23!50;UBERON:0002616!1.70e-22!49;UBERON:0002346!2.98e-21!71;UBERON:0003075!2.98e-21!71;UBERON:0007284!2.98e-21!71;UBERON:0003056!8.50e-19!49;UBERON:0002020!7.33e-18!34;UBERON:0003080!2.33e-17!40;UBERON:0002780!9.66e-17!39;UBERON:0001890!9.66e-17!39;UBERON:0006240!9.66e-17!39;UBERON:0002791!5.37e-15!29;UBERON:0003528!5.37e-15!29;UBERON:0001893!5.37e-15!29;UBERON:0007811!5.08e-14!86;UBERON:0000153!1.10e-12!94;UBERON:0000956!2.35e-10!21;UBERON:0001869!2.35e-10!21;UBERON:0000203!2.35e-10!21;UBERON:0002619!4.86e-09!17;UBERON:0002021!3.35e-08!10;UBERON:0000411!3.35e-08!10;UBERON:0001950!3.35e-08!10;UBERON:0004111!1.52e-07!122;UBERON:0000025!2.69e-07!114;UBERON:0003076!2.78e-07!12;UBERON:0003057!2.78e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.44e-45,54;UBERON:0001017,7.29e-42,73;UBERON:0001049,8.47e-42,52;UBERON:0005068,8.47e-42,52;UBERON:0006241,8.47e-42,52;UBERON:0007135,8.47e-42,52;UBERON:0001016,2.05e-40,75;UBERON:0002020,2.52e-35,34;UBERON:0000955,6.12e-35,47;UBERON:0006238,6.12e-35,47;UBERON:0002616,1.13e-33,46;UBERON:0002346,1.36e-33,64;UBERON:0003075,1.36e-33,64;UBERON:0007284,1.36e-33,64;UBERON:0004121,4.10e-32,95;UBERON:0000924,4.10e-32,95;UBERON:0006601,4.10e-32,95;UBERON:0010371,1.51e-29,73;UBERON:0003080,1.17e-28,40;UBERON:0003528,1.40e-28,29;UBERON:0002791,1.40e-28,29;UBERON:0001893,1.40e-28,29;UBERON:0002780,2.72e-27,39;UBERON:0001890,2.72e-27,39;UBERON:0006240,2.72e-27,39;UBERON:0003056,2.13e-23,49;UBERON:0010314,4.27e-21,92;UBERON:0000956,8.01e-18,21;UBERON:0001869,8.01e-18,21;UBERON:0000203,8.01e-18,21;UBERON:0002619,1.76e-17,17;UBERON:0002021,1.87e-17,10;UBERON:0000411,1.87e-17,10;UBERON:0001950,1.87e-17,10;UBERON:0000025,4.12e-13,114;UBERON:0003076,4.16e-13,12;UBERON:0003057,4.16e-13,12;UBERON:0004111,2.45e-12,122;UBERON:0002420,3.90e-12,8;UBERON:0007245,3.90e-12,8;UBERON:0010009,3.90e-12,8;UBERON:0010011,3.90e-12,8;UBERON:0000454,3.90e-12,8;UBERON:0002240,5.32e-09,6;UBERON:0005174,5.32e-09,6;UBERON:0001137,5.32e-09,6;UBERON:0011216,1.22e-08,194;UBERON:0000369,2.04e-08,5;UBERON:0002435,2.04e-08,5;UBERON:0000204,2.04e-08,5;UBERON:0010082,2.04e-08,5;UBERON:0001948,8.08e-08,5;UBERON:0002315,8.08e-08,5 | |||
|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0,0,0,0.422366166455,0.234064526321993,0.171217968225505,0.239316476986009,0,0,0,0,0,0.630924330716475,0.137114433605739,0,1.27564935226605,0.0992909512008853,0.522399578277871,0,0,0,0,0,0.380046838912748,0,0,0,1.23012957516914,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,2.34717403304412,0.872100625521786,0.439372365468944,0,0.279972843250725,1.43752564364972,0,0.725362142011344,0,0,0,0,2.42779753031517,3.70293685490423,4.43681982454325,1.0165335962074,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.829516898467821,2.29510095163874,0.420649922702764,3.99911378165325,4.63823935998388,1.34739879136449,1.82106394934649,0.919218786610021,8.8092704799511,6.12899222808901,3.84016333140609,4.74790635828698,4.66586982372289,5.2091337055676,3.62937898701795,4.50210088025344,2.44477196442896,2.65165726926301,2.84743361598206,3.35519002485541,0.605809546665472,0.302286240427142,0.289864488701678,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0,0.301445281105245,0.587943535678524,0.125666591329675,0.247194967734374,0,0.884610551949874,0.485300549842228,0,0,0,1.75668478206928,1.46612694769419,0,0.718890747035522,0,0.381210681219194,4.04434726393021,2.74500361691176,3.76963056338593,7.12679712788333,6.64860189058859,3.74018480207208,4.70499662896497,0.509196819251581,0.248813941220186,0,0.420883711772948,0.650602214813519,0.459804208866946,0.900310649026746,0.60281927134286,1.42876648217788,0.384341160854549,0.655912071918102,0.517406741478031,0.862271971731369,0.378212160335639,0.527853372491847,0,0,0.696504333044333,0,0.199034266818493,0,0.257347907114715,0,0.414251545071004,0.938104239924385,0.540186184383045,0.710234206755631,0.590292695242212,0.771335564436891,0.232533944750408,0.268273401399619,0.817357396570186,0.493679549740441,0.164167464079095,0.405344047729279,0.146199987425332,0,0.134206418760372,5.67782861123144,3.39585220851639,0,0,0,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0,0.397912944082302,0,0,0,0.199141273254367,0.379335801906163,0.456994050438915,0,0.407302655690628,0.193952487167626,0.420814919341911,0.379419222745544,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.393117990226406,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0.8858587585951,0.637819074629948,0.163863314715738,0.345369963731791,0,0,0,0.491764273019036,0,3.21101179975584,3.8679856575427,0.163934945376675,0.252470927204373,0,0.390438744296638,0.215423397732799,0.238968797952552,0.891194696329576,0.283076530788832,0,0.584511715822624,0.395287777946524,2.89189184779626,0.141940085208269,0.890328018336276,1.95464351224291,0.329940245945071,0,0,0.302323556964751,0,0,0,0,0.727067458955011,0,0,0,0,0.680879211507576,0.18006109403131,0.776152102696527,0.214337035031592,0.532020700926821,2.49716344642899,0.493647061806363,1.8267896946876,0,0.21183207086382,0,0,0.322928853391811,0.0603129249281559,0.238744688006273,0.328281799490123,0,3.15223013417866,0,0.206386867963223,0,0,0.136694227721025,0,0.679913719975421,0.839708713941948,0.829199842826543,0,0.474503990371703,0,0.108005340821801,0.209088296014469,0,0,0.247960367176008,0,0.129614973291793,0.621339313086926,2.25477175473676,0.149516546043979,0.827292452285488,0.583353565032143,0.258319646955462,0.168956125490778,0,0.39061315453185,0.838874755405687,1.93267296660805,3.74439008135225,0,0.202725215290164,0.513554785824136,0.129920822977795,0,0,0,0.147689527174577,0.302899349844443,0.457240839929999,0,0.194915761479505,0.0962118416403295,0,0.226730383615211,0,0.0897138566094757,0.335769232728157,0.386379188064381,0.187682475451182,0.73260649706906,0.214368379079066,0.501572104035363,6.21227026878773,5.52390283808612,4.58316410751517,5.15559547031063,6.85082519770642,9.06472676867641,10.8003600037089,6.30449684513909,5.43770890781046,6.21312374102184,0.830298780673413,0.399024873401031,0.853668028770671,0.729320151204882,0.628839487883947,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,0.758091635291392,1.01391719956096,0.565879024158229,0.561849044819294,0.512201219238954,0.516919220600519,0.476293691283074,0.579421629724277,0.578727661391115,0.824171801606613,0,0.342869252385415,0.354951612318675,0.238436189947321,0.581385666529314,0.188218760830661,0.25384382367503,0.365855945745545,0.789209134313529,0.271608227691724,0.561142271657738,0.593175090620871,0.591026894253381,1.22769312950907,0.309873682371932,0.578719832943424,0.499621155875892,0.467863216890817,0.859484216193193,0.382576664137687,0.661774257358546,0 | |||
|short_description=p5@Git1 | |||
}} |
Latest revision as of 17:18, 25 September 2015
Short description: | p5@Git1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Git1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -198bp_to_NM_001004144, uc007kgy.1_5end |
EntrezGene: | Git1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.60e-23 | 23 |
neuroblast (sensu Vertebrata) | 3.60e-23 | 23 |
neuron | 2.00e-14 | 33 |
neuronal stem cell | 2.00e-14 | 33 |
neuroblast | 2.00e-14 | 33 |
electrically signaling cell | 2.00e-14 | 33 |
ectodermal cell | 6.87e-13 | 44 |
neurectodermal cell | 6.87e-13 | 44 |
neural cell | 3.83e-12 | 43 |
electrically responsive cell | 2.28e-11 | 39 |
electrically active cell | 2.28e-11 | 39 |