FFCP PHASE1:Mm9::chr11:87793972..87793994,-: Difference between revisions
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{{FFCP|EntrezGene=68097|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=343bp_to_uc011yce.1_5end|description=CAGE_peak_9_at_Dynll2_5end|id=chr11:87793972..87793994,-|ontology_enrichment_celltype=CL:0000117!2.14e-13!23;CL:0000337!2.14e-13!23;CL:0000393!3.29e-09!39;CL:0000211!3.29e-09!39;CL:0000055!2.14e-08!50;CL:0000540!2.41e-08!33;CL:0000047!2.41e-08!33;CL:0000031!2.41e-08!33;CL:0000404!2.41e-08!33;CL:0000221!1.95e-07!44;CL:0000133!1.95e-07!44;CL:0002319!4.63e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.35e-27,23;CL:0000337,1.35e-27,23;CL:0000540,2.91e-18,33;CL:0000047,2.91e-18,33;CL:0000031,2.91e-18,33;CL:0000404,2.91e-18,33;CL:0002319,1.98e-17,43;CL:0000221,5.96e-17,44;CL:0000133,5.96e-17,44;CL:0000393,5.82e-15,39;CL:0000211,5.82e-15,39;CL:0002614,7.13e-11,3;CL:0002321,1.47e-10,70;CL:0002610,3.98e-10,3;CL:0002613,6.06e-10,3;CL:0002612,3.31e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.57e-19!63;UBERON:0001017!7.44e-19!73;UBERON:0005743!7.44e-19!73;UBERON:0001049!7.47e-19!52;UBERON:0005068!7.47e-19!52;UBERON:0006241!7.47e-19!52;UBERON:0007135!7.47e-19!52;UBERON:0000955!2.85e-18!50;UBERON:0006238!2.85e-18!50;UBERON:0002616!8.50e-18!49;UBERON:0000073!1.48e-17!75;UBERON:0001016!1.48e-17!75;UBERON:0003080!2.78e-15!40;UBERON:0002780!8.76e-15!39;UBERON:0001890!8.76e-15!39;UBERON:0006240!8.76e-15!39;UBERON:0003056!1.49e-14!49;UBERON:0004111!1.62e-14!122;UBERON:0004121!2.63e-14!102;UBERON:0000924!2.63e-14!102;UBERON:0006601!2.63e-14!102;UBERON:0002346!4.73e-14!71;UBERON:0003075!4.73e-14!71;UBERON:0007284!4.73e-14!71;UBERON:0002020!7.99e-14!34;UBERON:0000025!2.24e-13!114;UBERON:0007811!5.08e-12!86;UBERON:0002791!2.23e-11!29;UBERON:0003528!2.23e-11!29;UBERON:0001893!2.23e-11!29;UBERON:0000153!5.73e-10!94;UBERON:0000477!6.13e-09!154;UBERON:0000956!3.30e-07!21;UBERON:0001869!3.30e-07!21;UBERON:0000203!3.30e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.55e-26,54;UBERON:0001017,9.27e-24,73;UBERON:0001016,5.42e-23,75;UBERON:0002020,6.19e-23,34;UBERON:0001049,1.23e-19,52;UBERON:0005068,1.23e-19,52;UBERON:0006241,1.23e-19,52;UBERON:0007135,1.23e-19,52;UBERON:0004121,1.11e-18,95;UBERON:0000924,1.11e-18,95;UBERON:0006601,1.11e-18,95;UBERON:0002346,6.67e-17,64;UBERON:0003075,6.67e-17,64;UBERON:0007284,6.67e-17,64;UBERON:0003528,7.94e-16,29;UBERON:0002791,7.94e-16,29;UBERON:0001893,7.94e-16,29;UBERON:0002021,2.79e-14,10;UBERON:0000411,2.79e-14,10;UBERON:0001950,2.79e-14,10;UBERON:0010371,2.82e-14,73;UBERON:0002420,3.26e-14,8;UBERON:0007245,3.26e-14,8;UBERON:0010009,3.26e-14,8;UBERON:0010011,3.26e-14,8;UBERON:0000454,3.26e-14,8;UBERON:0002616,5.03e-14,46;UBERON:0000955,1.18e-13,47;UBERON:0006238,1.18e-13,47;UBERON:0002780,6.39e-13,39;UBERON:0001890,6.39e-13,39;UBERON:0006240,6.39e-13,39;UBERON:0003080,1.59e-12,40;UBERON:0003056,3.24e-11,49;UBERON:0002038,7.13e-11,3;UBERON:0009663,7.13e-11,3;UBERON:0009661,7.13e-11,3;UBERON:0000125,7.13e-11,3;UBERON:0002308,7.13e-11,3;UBERON:0010314,2.02e-10,92;UBERON:0004684,3.98e-10,3;UBERON:0002275,3.98e-10,3;UBERON:0001948,1.27e-09,5;UBERON:0002315,1.27e-09,5;UBERON:0002257,3.31e-09,3;UBERON:0000025,1.57e-08,114;UBERON:0003076,2.53e-08,12;UBERON:0003057,2.53e-08,12;UBERON:0002950,3.05e-08,4;UBERON:0001891,3.05e-08,4;UBERON:0009616,3.05e-08,4;UBERON:0010286,3.05e-08,4;UBERON:0002240,4.97e-08,6;UBERON:0005174,4.97e-08,6;UBERON:0001137,4.97e-08,6;UBERON:0002619,5.21e-08,17;UBERON:0004111,1.13e-07,122;UBERON:0011216,3.08e-07,194|phase1_expression=0.960893082628764,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.304130793658544,0.550640256485045,2.34717403304412,0,0,0.58328969722285,0.139986421625363,0,0.167782606057736,0,0,0.514518872071894,0,0.515672092277442,1.61853168687678,1.5869729378161,0.633831403506179,0.338844532069132,0,0,0,0,0.299600110518405,1.15265491596466,0.518448061542388,0.540023753326763,0.210324961351382,1.99955689082663,0.220868540951614,0.367472397644862,0.958454710182364,0.919218786610021,1.10115880999389,4.08599481872601,5.06901559745603,1.31886287730194,1.9212405156506,3.12548022334056,3.35019598801657,4.50210088025344,6.41752640662602,1.47314292736834,1.28134512719193,1.1183966749518,0,0,0,0.860423876981386,0,1.07940638327563,0,0,0,0.170430322578058,0.259786004602869,0,0.704217098883403,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0.461230994512117,0.301445281105245,0,0.125666591329675,0,0.289198713839823,0,0,0,0,0,0,0.41889341362691,0.766371165625774,0,0,0,0.748953197024114,0.915001205637253,0.125654352112864,0.521472960576829,0.255715457330331,0.41557608911912,0.973447578406546,0.101839363850316,0.124406970610093,0.252722758433675,1.26265113531884,0.260240885925407,0,0,0.150704817835715,0.0680364991513279,0.384341160854549,0.374806898238915,0.517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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68097 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=343bp_to_uc011yce.1_5end | |||
|cluster_id=chr11:87793972..87793994,- | |||
|description=CAGE_peak_9_at_Dynll2_5end | |||
|id=chr11:87793972..87793994,- | |||
|ontology_enrichment_celltype=CL:0000117!2.14e-13!23;CL:0000337!2.14e-13!23;CL:0000393!3.29e-09!39;CL:0000211!3.29e-09!39;CL:0000055!2.14e-08!50;CL:0000540!2.41e-08!33;CL:0000047!2.41e-08!33;CL:0000031!2.41e-08!33;CL:0000404!2.41e-08!33;CL:0000221!1.95e-07!44;CL:0000133!1.95e-07!44;CL:0002319!4.63e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.35e-27,23;CL:0000337,1.35e-27,23;CL:0000540,2.91e-18,33;CL:0000047,2.91e-18,33;CL:0000031,2.91e-18,33;CL:0000404,2.91e-18,33;CL:0002319,1.98e-17,43;CL:0000221,5.96e-17,44;CL:0000133,5.96e-17,44;CL:0000393,5.82e-15,39;CL:0000211,5.82e-15,39;CL:0002614,7.13e-11,3;CL:0002321,1.47e-10,70;CL:0002610,3.98e-10,3;CL:0002613,6.06e-10,3;CL:0002612,3.31e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.57e-19!63;UBERON:0001017!7.44e-19!73;UBERON:0005743!7.44e-19!73;UBERON:0001049!7.47e-19!52;UBERON:0005068!7.47e-19!52;UBERON:0006241!7.47e-19!52;UBERON:0007135!7.47e-19!52;UBERON:0000955!2.85e-18!50;UBERON:0006238!2.85e-18!50;UBERON:0002616!8.50e-18!49;UBERON:0000073!1.48e-17!75;UBERON:0001016!1.48e-17!75;UBERON:0003080!2.78e-15!40;UBERON:0002780!8.76e-15!39;UBERON:0001890!8.76e-15!39;UBERON:0006240!8.76e-15!39;UBERON:0003056!1.49e-14!49;UBERON:0004111!1.62e-14!122;UBERON:0004121!2.63e-14!102;UBERON:0000924!2.63e-14!102;UBERON:0006601!2.63e-14!102;UBERON:0002346!4.73e-14!71;UBERON:0003075!4.73e-14!71;UBERON:0007284!4.73e-14!71;UBERON:0002020!7.99e-14!34;UBERON:0000025!2.24e-13!114;UBERON:0007811!5.08e-12!86;UBERON:0002791!2.23e-11!29;UBERON:0003528!2.23e-11!29;UBERON:0001893!2.23e-11!29;UBERON:0000153!5.73e-10!94;UBERON:0000477!6.13e-09!154;UBERON:0000956!3.30e-07!21;UBERON:0001869!3.30e-07!21;UBERON:0000203!3.30e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.55e-26,54;UBERON:0001017,9.27e-24,73;UBERON:0001016,5.42e-23,75;UBERON:0002020,6.19e-23,34;UBERON:0001049,1.23e-19,52;UBERON:0005068,1.23e-19,52;UBERON:0006241,1.23e-19,52;UBERON:0007135,1.23e-19,52;UBERON:0004121,1.11e-18,95;UBERON:0000924,1.11e-18,95;UBERON:0006601,1.11e-18,95;UBERON:0002346,6.67e-17,64;UBERON:0003075,6.67e-17,64;UBERON:0007284,6.67e-17,64;UBERON:0003528,7.94e-16,29;UBERON:0002791,7.94e-16,29;UBERON:0001893,7.94e-16,29;UBERON:0002021,2.79e-14,10;UBERON:0000411,2.79e-14,10;UBERON:0001950,2.79e-14,10;UBERON:0010371,2.82e-14,73;UBERON:0002420,3.26e-14,8;UBERON:0007245,3.26e-14,8;UBERON:0010009,3.26e-14,8;UBERON:0010011,3.26e-14,8;UBERON:0000454,3.26e-14,8;UBERON:0002616,5.03e-14,46;UBERON:0000955,1.18e-13,47;UBERON:0006238,1.18e-13,47;UBERON:0002780,6.39e-13,39;UBERON:0001890,6.39e-13,39;UBERON:0006240,6.39e-13,39;UBERON:0003080,1.59e-12,40;UBERON:0003056,3.24e-11,49;UBERON:0002038,7.13e-11,3;UBERON:0009663,7.13e-11,3;UBERON:0009661,7.13e-11,3;UBERON:0000125,7.13e-11,3;UBERON:0002308,7.13e-11,3;UBERON:0010314,2.02e-10,92;UBERON:0004684,3.98e-10,3;UBERON:0002275,3.98e-10,3;UBERON:0001948,1.27e-09,5;UBERON:0002315,1.27e-09,5;UBERON:0002257,3.31e-09,3;UBERON:0000025,1.57e-08,114;UBERON:0003076,2.53e-08,12;UBERON:0003057,2.53e-08,12;UBERON:0002950,3.05e-08,4;UBERON:0001891,3.05e-08,4;UBERON:0009616,3.05e-08,4;UBERON:0010286,3.05e-08,4;UBERON:0002240,4.97e-08,6;UBERON:0005174,4.97e-08,6;UBERON:0001137,4.97e-08,6;UBERON:0002619,5.21e-08,17;UBERON:0004111,1.13e-07,122;UBERON:0011216,3.08e-07,194 | |||
|phase1_expression=0.960893082628764,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.304130793658544,0.550640256485045,2.34717403304412,0,0,0.58328969722285,0.139986421625363,0,0.167782606057736,0,0,0.514518872071894,0,0.515672092277442,1.61853168687678,1.5869729378161,0.633831403506179,0.338844532069132,0,0,0,0,0.299600110518405,1.15265491596466,0.518448061542388,0.540023753326763,0.210324961351382,1.99955689082663,0.220868540951614,0.367472397644862,0.958454710182364,0.919218786610021,1.10115880999389,4.08599481872601,5.06901559745603,1.31886287730194,1.9212405156506,3.12548022334056,3.35019598801657,4.50210088025344,6.41752640662602,1.47314292736834,1.28134512719193,1.1183966749518,0,0,0,0.860423876981386,0,1.07940638327563,0,0,0,0.170430322578058,0.259786004602869,0,0.704217098883403,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0.461230994512117,0.301445281105245,0,0.125666591329675,0,0.289198713839823,0,0,0,0,0,0,0.41889341362691,0.766371165625774,0,0,0,0.748953197024114,0.915001205637253,0.125654352112864,0.521472960576829,0.255715457330331,0.41557608911912,0.973447578406546,0.101839363850316,0.124406970610093,0.252722758433675,1.26265113531884,0.260240885925407,0,0,0.150704817835715,0.0680364991513279,0.384341160854549,0.374806898238915,0.517406741478031,0,0,0,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.393528463494808,0.308534225774757,0.232533944750408,0.536546802799238,0.233530684734339,0.493679549740441,0.985004784474571,0.405344047729279,0.146199987425332,0.658650345873152,0,0.210289948564127,0.308713837137853,0,0.793351699990633,0.426576501070468,0,0.257734922644187,0.201683524623343,0.22237804384487,0.570676878337677,0,0.494096864172033,0.251335208800269,0.397912944082302,0,0,0,0.398282546508734,0.569003702859245,0.228497025219458,0,0.203651327845314,0.193952487167626,0.210407459670956,0,0.442830443938806,0.470996183524124,0,0.296452627087149,0.166845105716094,0.393117990226406,0,0,0.241177159752417,0,0,0,0,1.43768206527355,0,0,0,0.717589654087649,0,0.184753190166605,0.37898282354097,0.162964976442026,0.509235257325564,0,0.167506257441816,0.238043640886014,0,0,0.221464689648775,0.637819074629948,0,0,0,0,0.54390568381871,0,0,0.80275294993896,1.05490517932983,0,0,0,0,0,0,0.445597348164788,0,0,0.292255857911312,0,0.642642632843614,0,0,0.325773918707152,0.164970122972535,0,0.485561272309963,0,0.377210159511796,0,0,0,0.727067458955011,0,0,1.05418608574999,0,0.340439605753788,0.720244376125241,0.388076051348264,1.28602221018955,0.354680467284547,0.891844088010353,0.658196082408484,0.304464949114599,0,0.21183207086382,0,0.32977250588296,0.161464426695906,0,0.119372344003136,0,0.582961673259701,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.432021363287205,0.418176592028937,0,0,0.165306911450672,0,0.388844919875379,0.621339313086926,0,0,0.330916980914195,0.777804753376191,0.387479470433193,0,0.117357238645754,0,0.209718688851422,0.241584120826006,0,0,0.810900861160657,0.205421914329655,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.194915761479505,0,0,0.226730383615211,0.443971906748129,0.179427713218951,0.167884616364078,0.965947970160952,0,0.549454872801795,0.214368379079066,0,1.12950368523413,1.38097570952153,2.29158205375759,0.859265911718438,2.05524755931193,0,2.70009000092722,1.35096360967266,0.453142408984205,2.07104124700728,0.207574695168353,0.399024873401031,0,0,0,0.367687016900028,0,0,0.64183841918363,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0.685738504770831,0.532427418478012,0,0,0.0941093804153306,0.25384382367503,0.365855945745545,0,0.135804113845862,0.561142271657738,0,0.394017929502254,0,0,0,0.499621155875892,0,0,0,0,0.231867835620421 | |||
|short_description=p9@Dynll2 | |||
}} |
Latest revision as of 22:26, 25 September 2015
Short description: | p9@Dynll2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Dynll2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 343bp_to_uc011yce.1_5end |
EntrezGene: | Dynll2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.35e-27 | 23 |
neuroblast (sensu Vertebrata) | 1.35e-27 | 23 |
neuron | 2.91e-18 | 33 |
neuronal stem cell | 2.91e-18 | 33 |
neuroblast | 2.91e-18 | 33 |
electrically signaling cell | 2.91e-18 | 33 |
neural cell | 1.98e-17 | 43 |
ectodermal cell | 5.96e-17 | 44 |
neurectodermal cell | 5.96e-17 | 44 |
electrically responsive cell | 5.82e-15 | 39 |
electrically active cell | 5.82e-15 | 39 |
neuron of the substantia nigra | 7.13e-11 | 3 |
embryonic cell | 1.47e-10 | 70 |
raphe nuclei neuron | 3.98e-10 | 3 |
striatum neuron | 6.06e-10 | 3 |
neuron of the ventral spinal cord | 3.31e-09 | 3 |