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FFCP PHASE1:Mm9::chr3:94203194..94203255,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=320747
|EntrezGene=320747
|HGNC=
|HGNC=
|MCL_coexpression_id=218
|MCL_coexpression_id=218
|TSSclassifier=NA
|UniProt=Q149C3
|UniProt=Q149C3
|association_with_transcript=53bp_to_NM_177250,uc008qgb.1_5end
|association_with_transcript=53bp_to_NM_177250,uc008qgb.1_5end
|cluster_id=chr3:94203194..94203255,+
|description=CAGE_peak_2_at_Lingo4_5end
|description=CAGE_peak_2_at_Lingo4_5end
|id=chr3:94203194..94203255,+
|id=chr3:94203194..94203255,+
|ontology_enrichment_celltype=CL:0000117!7.94e-09!23;CL:0000337!7.94e-09!23;CL:0000540!3.45e-07!33;CL:0000047!3.45e-07!33;CL:0000031!3.45e-07!33;CL:0000404!3.45e-07!33;CL:0000221!5.24e-07!44;CL:0000133!5.24e-07!44
|ontology_enrichment_celltype=CL:0000117!7.94e-09!23;CL:0000337!7.94e-09!23;CL:0000540!3.45e-07!33;CL:0000047!3.45e-07!33;CL:0000031!3.45e-07!33;CL:0000404!3.45e-07!33;CL:0000221!5.24e-07!44;CL:0000133!5.24e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,2.81e-10,23;CL:0000337,2.81e-10,23;CL:0000540,4.16e-09,33;CL:0000047,4.16e-09,33;CL:0000031,4.16e-09,33;CL:0000404,4.16e-09,33;CL:0002610,2.81e-08,3;CL:0002612,1.52e-07,3;CL:0002614,2.52e-07,3;CL:0000393,2.88e-07,39;CL:0000211,2.88e-07,39;CL:0000221,3.21e-07,44;CL:0000133,3.21e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!2.39e-20!86;UBERON:0000153!4.57e-18!94;UBERON:0004121!1.55e-17!102;UBERON:0000924!1.55e-17!102;UBERON:0006601!1.55e-17!102;UBERON:0001017!5.49e-17!73;UBERON:0005743!5.49e-17!73;UBERON:0000033!4.35e-16!63;UBERON:0002346!5.94e-16!71;UBERON:0003075!5.94e-16!71;UBERON:0007284!5.94e-16!71;UBERON:0000073!6.01e-16!75;UBERON:0001016!6.01e-16!75;UBERON:0001049!4.25e-15!52;UBERON:0005068!4.25e-15!52;UBERON:0006241!4.25e-15!52;UBERON:0007135!4.25e-15!52;UBERON:0000955!1.40e-13!50;UBERON:0006238!1.40e-13!50;UBERON:0002616!4.11e-13!49;UBERON:0003056!1.12e-10!49;UBERON:0002020!2.78e-10!34;UBERON:0003076!1.24e-08!12;UBERON:0003057!1.24e-08!12;UBERON:0003080!1.70e-08!40;UBERON:0000475!2.44e-08!200;UBERON:0002780!7.07e-08!39;UBERON:0001890!7.07e-08!39;UBERON:0006240!7.07e-08!39;UBERON:0000064!1.72e-07!99;UBERON:0002791!3.75e-07!29;UBERON:0003528!3.75e-07!29;UBERON:0001893!3.75e-07!29
|ontology_enrichment_uberon=UBERON:0007811!2.39e-20!86;UBERON:0000153!4.57e-18!94;UBERON:0004121!1.55e-17!102;UBERON:0000924!1.55e-17!102;UBERON:0006601!1.55e-17!102;UBERON:0001017!5.49e-17!73;UBERON:0005743!5.49e-17!73;UBERON:0000033!4.35e-16!63;UBERON:0002346!5.94e-16!71;UBERON:0003075!5.94e-16!71;UBERON:0007284!5.94e-16!71;UBERON:0000073!6.01e-16!75;UBERON:0001016!6.01e-16!75;UBERON:0001049!4.25e-15!52;UBERON:0005068!4.25e-15!52;UBERON:0006241!4.25e-15!52;UBERON:0007135!4.25e-15!52;UBERON:0000955!1.40e-13!50;UBERON:0006238!1.40e-13!50;UBERON:0002616!4.11e-13!49;UBERON:0003056!1.12e-10!49;UBERON:0002020!2.78e-10!34;UBERON:0003076!1.24e-08!12;UBERON:0003057!1.24e-08!12;UBERON:0003080!1.70e-08!40;UBERON:0000475!2.44e-08!200;UBERON:0002780!7.07e-08!39;UBERON:0001890!7.07e-08!39;UBERON:0006240!7.07e-08!39;UBERON:0000064!1.72e-07!99;UBERON:0002791!3.75e-07!29;UBERON:0003528!3.75e-07!29;UBERON:0001893!3.75e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0003076,5.47e-19,12;UBERON:0003057,5.47e-19,12;UBERON:0002240,4.34e-14,6;UBERON:0005174,4.34e-14,6;UBERON:0001137,4.34e-14,6;UBERON:0000073,6.57e-13,54;UBERON:0002370,7.05e-13,23;UBERON:0000974,7.05e-13,23;UBERON:0004807,7.05e-13,23;UBERON:0005058,7.05e-13,23;UBERON:0003351,7.05e-13,23;UBERON:0009113,7.05e-13,23;UBERON:0003295,7.05e-13,23;UBERON:0009722,7.05e-13,23;UBERON:0005562,7.05e-13,23;UBERON:0007690,7.05e-13,23;UBERON:0006562,3.18e-12,24;UBERON:0003408,3.18e-12,24;UBERON:0001557,3.18e-12,24;UBERON:0001042,3.18e-12,24;UBERON:0008814,3.18e-12,24;UBERON:0009145,3.18e-12,24;UBERON:0001017,9.58e-12,73;UBERON:0001948,1.01e-11,5;UBERON:0002315,1.01e-11,5;UBERON:0001016,2.78e-11,75;UBERON:0004177,3.37e-11,29;UBERON:0005057,3.37e-11,29;UBERON:0000072,1.48e-10,27;UBERON:0001049,1.57e-10,52;UBERON:0005068,1.57e-10,52;UBERON:0006241,1.57e-10,52;UBERON:0007135,1.57e-10,52;UBERON:0007811,5.53e-10,36;UBERON:0002950,1.41e-09,4;UBERON:0001891,1.41e-09,4;UBERON:0009616,1.41e-09,4;UBERON:0010286,1.41e-09,4;UBERON:0011216,3.25e-09,194;UBERON:0000077,9.17e-09,35;UBERON:0004121,1.14e-08,95;UBERON:0000924,1.14e-08,95;UBERON:0006601,1.14e-08,95;UBERON:0004684,2.81e-08,3;UBERON:0002275,2.81e-08,3;UBERON:0010371,3.89e-08,73;UBERON:0000153,7.85e-08,43;UBERON:0002346,9.27e-08,64;UBERON:0003075,9.27e-08,64;UBERON:0007284,9.27e-08,64;UBERON:0002257,1.52e-07,3;UBERON:0002038,2.52e-07,3;UBERON:0009663,2.52e-07,3;UBERON:0009661,2.52e-07,3;UBERON:0000125,2.52e-07,3;UBERON:0002308,2.52e-07,3;UBERON:0004733,4.34e-07,6;UBERON:0004732,4.34e-07,6;UBERON:0002028,4.34e-07,6;UBERON:0007277,4.34e-07,6;UBERON:0000483,5.92e-07,174;UBERON:0000119,8.61e-07,176
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.595303031057488,3.47518329203099,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0.65407546914134,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.898800331555214,0.384218305321555,0.207379224616955,0,0.420649922702764,4.28476476605705,3.97563373712904,0.367472397644862,0.287536413054709,0,8.8092704799511,4.46905683298157,6.91229399653096,0.527545150920775,0.182975287204819,0.52091337055676,8.37548997004143,1.12552522006336,2.75036845998258,5.30331453852602,2.98980529678116,1.86399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0.35333957451034,2.39433813620357,0,2.54805239706646,0,0,0,0,0,1.29468941823586,0.742210695324124,0.346970653532272,0,0,0.150722640552623,0.117588707135705,0.376999773989026,0,0,0,0,0,0,0,6.73395833126558,6.28340120440365,0,0,0,0,7.33974133083631,0.915001205637253,0.251308704225729,0.347648640384553,0.511430914660661,4.77912502486988,2.43361894601636,0.101839363850316,0,0.252722758433675,0.631325567659422,0.260240885925407,0.459804208866946,0.180062129805349,0,0.95251098811859,0.640568601424249,0.281105173679186,0.776110112217047,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.617427674275707,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0,0.251335208800269,0.397912944082302,0.779856348476481,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0.234690248288502,0,0,0,0.315270288212382,0.221464689648775,0,0,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,25.2064426280833,19.9259867206745,0,0,0,0,0,0,0,0.566153061577665,0.404810701674894,0,1.58115111178609,0.642642632843614,0.283880170416537,0,0,0.329940245945071,0,0.242780636154981,0,0,0,1.53717573971964,0.516856586336442,0.727067458955011,0,0.948110273807448,0,0,0.680879211507576,0.18006109403131,0.517434735131018,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0.328281799490123,0.291480836629851,35.6016579860179,0,1.03193433981611,0.555583582109135,0,0,0.686334519619568,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.648074866458964,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0,0,2.8441000856536,0,0.205421914329655,1.16928740680016,3.58053391334963,1.19208812868759,2.16351809135944,1.18151621739662,2.3222283488074,3.20068587950999,2.82313318383153,1.36441033035653,1.25075394132428,1.28564592399726,0,0,0,0,0.386379188064381,0,0.183151624267265,0.214368379079066,0,0,0.920650473014354,0.572895513439397,0.343706364687375,0.685082519770642,0,0.675022500231806,1.35096360967266,0.453142408984205,1.03552062350364,0,0.399024873401031,0.170733605754134,0.486213434136588,0,0,0.44449345560323,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.231768651889711,0.38581844092741,0.412085900803307,0,0,0,0.715308569841963,0,0.282328141245992,0.169229215783353,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.464810523557898,0.385813221962283,0,0.233931608445408,0,0.382576664137687,0.220591419119515,0.231867835620421
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.595303031057488,3.47518329203099,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0.65407546914134,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.898800331555214,0.384218305321555,0.207379224616955,0,0.420649922702764,4.28476476605705,3.97563373712904,0.367472397644862,0.287536413054709,0,8.8092704799511,4.46905683298157,6.91229399653096,0.527545150920775,0.182975287204819,0.52091337055676,8.37548997004143,1.12552522006336,2.75036845998258,5.30331453852602,2.98980529678116,1.86399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0.35333957451034,2.39433813620357,0,2.54805239706646,0,0,0,0,0,1.29468941823586,0.742210695324124,0.346970653532272,0,0,0.150722640552623,0.117588707135705,0.376999773989026,0,0,0,0,0,0,0,6.73395833126558,6.28340120440365,0,0,0,0,7.33974133083631,0.915001205637253,0.251308704225729,0.347648640384553,0.511430914660661,4.77912502486988,2.43361894601636,0.101839363850316,0,0.252722758433675,0.631325567659422,0.260240885925407,0.459804208866946,0.180062129805349,0,0.95251098811859,0.640568601424249,0.281105173679186,0.776110112217047,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.617427674275707,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0,0.251335208800269,0.397912944082302,0.779856348476481,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0.234690248288502,0,0,0,0.315270288212382,0.221464689648775,0,0,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,25.2064426280833,19.9259867206745,0,0,0,0,0,0,0,0.566153061577665,0.404810701674894,0,1.58115111178609,0.642642632843614,0.283880170416537,0,0,0.329940245945071,0,0.242780636154981,0,0,0,1.53717573971964,0.516856586336442,0.727067458955011,0,0.948110273807448,0,0,0.680879211507576,0.18006109403131,0.517434735131018,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0.328281799490123,0.291480836629851,35.6016579860179,0,1.03193433981611,0.555583582109135,0,0,0.686334519619568,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.648074866458964,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0,0,2.8441000856536,0,0.205421914329655,1.16928740680016,3.58053391334963,1.19208812868759,2.16351809135944,1.18151621739662,2.3222283488074,3.20068587950999,2.82313318383153,1.36441033035653,1.25075394132428,1.28564592399726,0,0,0,0,0.386379188064381,0,0.183151624267265,0.214368379079066,0,0,0.920650473014354,0.572895513439397,0.343706364687375,0.685082519770642,0,0.675022500231806,1.35096360967266,0.453142408984205,1.03552062350364,0,0.399024873401031,0.170733605754134,0.486213434136588,0,0,0.44449345560323,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.231768651889711,0.38581844092741,0.412085900803307,0,0,0,0.715308569841963,0,0.282328141245992,0.169229215783353,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.464810523557898,0.385813221962283,0,0.233931608445408,0,0.382576664137687,0.220591419119515,0.231867835620421
|short_description=p2@Lingo4
|short_description=p2@Lingo4
}}
}}

Latest revision as of 22:43, 25 September 2015

Short description:p2@Lingo4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lingo4_5end
Coexpression cluster:MCL_coexpression_mm9:218
Association with transcript: 53bp_to_NM_177250, uc008qgb.1_5end
EntrezGene:Lingo4
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Lingo4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I26.28
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.34
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.95
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C225.21
medulla oblongata, neonate N30.CNhs11200.1396-42A319.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C935.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C13.58
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C42.32
thymus, neonate N07.CNhs11211.713-19D33.20
thymus, neonate N10.CNhs11194.748-24E42.82
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
posterior neural tube5.47e-1912
chordal neural plate5.47e-1912
spinal cord4.34e-146
dorsal region element4.34e-146
dorsum4.34e-146
regional part of nervous system6.57e-1354
thymus7.05e-1323
neck7.05e-1323
respiratory system epithelium7.05e-1323
hemolymphoid system gland7.05e-1323
pharyngeal epithelium7.05e-1323
thymic region7.05e-1323
pharyngeal gland7.05e-1323
entire pharyngeal arch endoderm7.05e-1323
thymus primordium7.05e-1323
early pharyngeal endoderm7.05e-1323
pharynx3.18e-1224
gland of gut3.18e-1224
upper respiratory tract3.18e-1224
chordate pharynx3.18e-1224
pharyngeal arch system3.18e-1224
pharyngeal region of foregut3.18e-1224
central nervous system9.58e-1273
regional part of spinal cord1.01e-115
gray matter of spinal cord1.01e-115
nervous system2.78e-1175
hemopoietic organ3.37e-1129
immune organ3.37e-1129
segment of respiratory tract1.48e-1027
neural tube1.57e-1052
neural rod1.57e-1052
future spinal cord1.57e-1052
neural keel1.57e-1052
craniocervical region5.53e-1036
regional part of midbrain1.41e-094
midbrain1.41e-094
presumptive midbrain1.41e-094
midbrain neural tube1.41e-094
organ system subdivision3.25e-09194
mixed endoderm/mesoderm-derived structure9.17e-0935
ectoderm-derived structure1.14e-0895
ectoderm1.14e-0895
presumptive ectoderm1.14e-0895
raphe nuclei2.81e-083
reticular formation2.81e-083
ecto-epithelium3.89e-0873
anterior region of body7.85e-0843
neurectoderm9.27e-0864
neural plate9.27e-0864
presumptive neural plate9.27e-0864
ventral horn of spinal cord1.52e-073
substantia nigra2.52e-073
telencephalic nucleus2.52e-073
midbrain nucleus2.52e-073
neural nucleus2.52e-073
nucleus of brain2.52e-073
segmental subdivision of hindbrain4.34e-076
segmental subdivision of nervous system4.34e-076
hindbrain4.34e-076
presumptive hindbrain4.34e-076
epithelium5.92e-07174
cell layer8.61e-07176
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