FFCP PHASE1:Mm9::chr2:158492927..158492930,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=228852 | |EntrezGene=228852 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3325 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q5S7,Q544H9,Q8VHQ3,Q8C9G4 | |UniProt=E9Q5S7,Q544H9,Q8VHQ3,Q8C9G4 | ||
|association_with_transcript=56bp_to_ENSMUST00000163423,NM_001159662,uc008nqo.2,uc008nqp.2_5end | |association_with_transcript=56bp_to_ENSMUST00000163423,NM_001159662,uc008nqo.2,uc008nqp.2_5end | ||
|cluster_id=chr2:158492927..158492930,+ | |||
|description=CAGE_peak_5_at_Ppp1r16b_5end | |description=CAGE_peak_5_at_Ppp1r16b_5end | ||
|id=chr2:158492927..158492930,+ | |id=chr2:158492927..158492930,+ | ||
|ontology_enrichment_celltype=CL:0000838!1.41e-07!12;CL:0000791!6.77e-07!9;CL:0000789!6.77e-07!9;CL:0002420!6.77e-07!9;CL:0002419!6.77e-07!9;CL:0000790!6.77e-07!9;CL:0000084!8.62e-07!11;CL:0000827!8.62e-07!11 | |ontology_enrichment_celltype=CL:0000838!1.41e-07!12;CL:0000791!6.77e-07!9;CL:0000789!6.77e-07!9;CL:0002420!6.77e-07!9;CL:0002419!6.77e-07!9;CL:0000790!6.77e-07!9;CL:0000084!8.62e-07!11;CL:0000827!8.62e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.33e-13,9;CL:0000789,3.33e-13,9;CL:0002420,3.33e-13,9;CL:0002419,3.33e-13,9;CL:0000790,3.33e-13,9;CL:0000838,4.53e-12,12;CL:0000624,8.78e-12,8;CL:0000542,5.81e-11,13;CL:0000051,5.81e-11,13;CL:0000084,1.89e-10,11;CL:0000827,1.89e-10,11;CL:0000893,3.64e-09,6;CL:0002489,3.64e-09,6;CL:0000898,3.64e-09,6;CL:0000809,3.64e-09,6;CL:0000810,3.64e-09,6;CL:0000895,3.64e-09,6;CL:0000808,3.64e-09,6;CL:0000894,3.64e-09,6;CL:0000806,3.64e-09,6;CL:0000807,3.64e-09,6;CL:0000805,3.64e-09,6;CL:0002425,3.64e-09,6;CL:0002436,3.64e-09,6;CL:0002427,3.64e-09,6;CL:0002428,3.64e-09,6;CL:0002429,3.64e-09,6;CL:0002433,3.64e-09,6;CL:0002431,3.64e-09,6;CL:0002432,3.64e-09,6;CL:0002031,1.99e-08,25;CL:0000738,7.50e-08,17;CL:0002087,7.50e-08,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!1.64e-12!86;UBERON:0000153!6.48e-11!94;UBERON:0000955!4.88e-10!50;UBERON:0006238!4.88e-10!50;UBERON:0001049!1.72e-09!52;UBERON:0005068!1.72e-09!52;UBERON:0006241!1.72e-09!52;UBERON:0007135!1.72e-09!52;UBERON:0002616!1.87e-09!49;UBERON:0000064!2.21e-08!99;UBERON:0002020!4.73e-08!34;UBERON:0000065!1.02e-07!41;UBERON:0001017!1.56e-07!73;UBERON:0005743!1.56e-07!73;UBERON:0002791!2.83e-07!29;UBERON:0003528!2.83e-07!29;UBERON:0001893!2.83e-07!29;UBERON:0001004!2.91e-07!42;UBERON:0000073!3.38e-07!75;UBERON:0001016!3.38e-07!75;UBERON:0000477!3.56e-07!154;UBERON:0000033!6.70e-07!63 | |ontology_enrichment_uberon=UBERON:0007811!1.64e-12!86;UBERON:0000153!6.48e-11!94;UBERON:0000955!4.88e-10!50;UBERON:0006238!4.88e-10!50;UBERON:0001049!1.72e-09!52;UBERON:0005068!1.72e-09!52;UBERON:0006241!1.72e-09!52;UBERON:0007135!1.72e-09!52;UBERON:0002616!1.87e-09!49;UBERON:0000064!2.21e-08!99;UBERON:0002020!4.73e-08!34;UBERON:0000065!1.02e-07!41;UBERON:0001017!1.56e-07!73;UBERON:0005743!1.56e-07!73;UBERON:0002791!2.83e-07!29;UBERON:0003528!2.83e-07!29;UBERON:0001893!2.83e-07!29;UBERON:0001004!2.91e-07!42;UBERON:0000073!3.38e-07!75;UBERON:0001016!3.38e-07!75;UBERON:0000477!3.56e-07!154;UBERON:0000033!6.70e-07!63 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.08e-10,54;UBERON:0000065,1.21e-10,41;UBERON:0001004,2.88e-10,42;UBERON:0000955,7.44e-10,47;UBERON:0006238,7.44e-10,47;UBERON:0002370,1.26e-09,23;UBERON:0000974,1.26e-09,23;UBERON:0004807,1.26e-09,23;UBERON:0005058,1.26e-09,23;UBERON:0003351,1.26e-09,23;UBERON:0009113,1.26e-09,23;UBERON:0003295,1.26e-09,23;UBERON:0009722,1.26e-09,23;UBERON:0005562,1.26e-09,23;UBERON:0007690,1.26e-09,23;UBERON:0001049,2.52e-09,52;UBERON:0005068,2.52e-09,52;UBERON:0006241,2.52e-09,52;UBERON:0007135,2.52e-09,52;UBERON:0006562,4.34e-09,24;UBERON:0003408,4.34e-09,24;UBERON:0001557,4.34e-09,24;UBERON:0001042,4.34e-09,24;UBERON:0008814,4.34e-09,24;UBERON:0009145,4.34e-09,24;UBERON:0002616,6.45e-09,46;UBERON:0001017,3.46e-08,73;UBERON:0001016,8.44e-08,75;UBERON:0000072,1.00e-07,27;UBERON:0002021,1.25e-07,10;UBERON:0000411,1.25e-07,10;UBERON:0001950,1.25e-07,10;UBERON:0011216,2.63e-07,194;UBERON:0004177,5.60e-07,29;UBERON:0005057,5.60e-07,29;UBERON:0000483,9.31e-07,174 | |||
|phase1_expression=0,0.348975407639361,0,0.90739263392049,0,0,0.467225281191051,1.16210991097419,5.34997144176334,4.91535505276186,1.19852577757853,1.27635454392538,1.54080656938085,1.13646523144697,0.666219523631325,0.607425802169478,0,2.05050407482854,2.74228867211478,2.97072756258621,1.61582251287033,0.198581902401771,0.522399578277871,0,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,7.21465206048266,3.62681071005672,2.35265659399725,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0.768436610643109,0.414758449233911,0.675029691658453,0.841299845405528,0.856952953211411,1.10434270475807,0,0.191690942036473,0,1.10115880999389,1.78762273319263,1.99688493233117,0.263772575460388,0.365950574409639,0.52091337055676,2.51264699101243,0.56276261003168,1.68078072554491,0.589257170947335,0.711858403995515,0,0.075726193333184,0,2.31891590961342,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.68510327831436,5.43769555659061,0.445326417194474,0,0,0,0,0.117588707135705,0.376999773989026,0,0,0,0.161766849947409,0.662524555381181,0,0,4.39171195517321,3.56059401582874,0.510914110417183,0.958520996047362,0,0,1.49790639404823,2.74500361691176,0.376963056338593,2.08589184230732,3.06858548796397,2.28566849015516,3.0825839982874,0,0.248813941220186,0,0.631325567659422,0,0,0,0,0.272145996605311,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0.398068533636986,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0.32833492815819,0.162137619091711,0.438599962275997,0,0.268412837520744,1.89260953707715,0.823236899034275,0.330418782983798,0.264450566663544,0,0,0.257734922644187,0,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0,0,0,0,0.189667900953082,0.456994050438915,0,0.407302655690628,0.193952487167626,0.210407459670956,0.0632365371242573,0.295220295959204,0,0.987177311374404,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0.482443521363367,1.47802552133284,0,0,0.169745085775188,0.704070744865506,0.502518772325447,1.19021820443007,1.17080188714679,0.788175720530955,1.10732344824387,1.75400245523236,1.47476983244164,1.55416483679306,0.867894351489069,0,0,0.491764273019036,0.275936746304732,4.0137647496948,3.04750385139728,0,0.252470927204373,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0,3.21321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0.356737635204141,0,0,0,0,0,0.16488625294148,0,0,0,0,0,3.52308073819968,0.854354403989263,0,0,0,0.410082683163076,0.915112692826091,0.849892149969277,0.979660166265606,0.967399816630967,0,0,0,0,0,0,0,0,0,0,0,0,0.897099276263873,0.66183396182839,0.194451188344048,0.516639293910924,0.844780627453891,0.352071715937262,1.0416350787516,0.524296722128554,0,0,1.89606672376907,0,0.102710957164827,0.25984164595559,0.895133478337407,0.993406773906324,1.08175904567972,0.590758108698309,1.61546319917036,1.143102099825,1.20991422164209,1.26695244961678,1.44317762460494,1.5193997283604,0,0,0,0,0.19318959403219,0,0,0,0,0,1.84130094602871,0.572895513439397,1.20297227640581,3.42541259885321,3.0215755895588,0.675022500231806,3.15224842256954,3.17199686288943,2.07104124700728,0,0,0.170733605754134,0,0,0.367687016900028,0.222246727801615,0,0,0,0,0.565879024158229,0.187283014939765,0.320125762024346,0.17230640686684,0,0.231768651889711,0.964546102318525,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0.355905054372522,0.492522411877817,0,0.309873682371932,0.192906610981141,0,0.467863216890817,0,0,0.441182838239031,0 | |phase1_expression=0,0.348975407639361,0,0.90739263392049,0,0,0.467225281191051,1.16210991097419,5.34997144176334,4.91535505276186,1.19852577757853,1.27635454392538,1.54080656938085,1.13646523144697,0.666219523631325,0.607425802169478,0,2.05050407482854,2.74228867211478,2.97072756258621,1.61582251287033,0.198581902401771,0.522399578277871,0,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,7.21465206048266,3.62681071005672,2.35265659399725,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0.768436610643109,0.414758449233911,0.675029691658453,0.841299845405528,0.856952953211411,1.10434270475807,0,0.191690942036473,0,1.10115880999389,1.78762273319263,1.99688493233117,0.263772575460388,0.365950574409639,0.52091337055676,2.51264699101243,0.56276261003168,1.68078072554491,0.589257170947335,0.711858403995515,0,0.075726193333184,0,2.31891590961342,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.68510327831436,5.43769555659061,0.445326417194474,0,0,0,0,0.117588707135705,0.376999773989026,0,0,0,0.161766849947409,0.662524555381181,0,0,4.39171195517321,3.56059401582874,0.510914110417183,0.958520996047362,0,0,1.49790639404823,2.74500361691176,0.376963056338593,2.08589184230732,3.06858548796397,2.28566849015516,3.0825839982874,0,0.248813941220186,0,0.631325567659422,0,0,0,0,0.272145996605311,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0.398068533636986,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0.32833492815819,0.162137619091711,0.438599962275997,0,0.268412837520744,1.89260953707715,0.823236899034275,0.330418782983798,0.264450566663544,0,0,0.257734922644187,0,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0,0,0,0,0.189667900953082,0.456994050438915,0,0.407302655690628,0.193952487167626,0.210407459670956,0.0632365371242573,0.295220295959204,0,0.987177311374404,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0.482443521363367,1.47802552133284,0,0,0.169745085775188,0.704070744865506,0.502518772325447,1.19021820443007,1.17080188714679,0.788175720530955,1.10732344824387,1.75400245523236,1.47476983244164,1.55416483679306,0.867894351489069,0,0,0.491764273019036,0.275936746304732,4.0137647496948,3.04750385139728,0,0.252470927204373,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0,3.21321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0.356737635204141,0,0,0,0,0,0.16488625294148,0,0,0,0,0,3.52308073819968,0.854354403989263,0,0,0,0.410082683163076,0.915112692826091,0.849892149969277,0.979660166265606,0.967399816630967,0,0,0,0,0,0,0,0,0,0,0,0,0.897099276263873,0.66183396182839,0.194451188344048,0.516639293910924,0.844780627453891,0.352071715937262,1.0416350787516,0.524296722128554,0,0,1.89606672376907,0,0.102710957164827,0.25984164595559,0.895133478337407,0.993406773906324,1.08175904567972,0.590758108698309,1.61546319917036,1.143102099825,1.20991422164209,1.26695244961678,1.44317762460494,1.5193997283604,0,0,0,0,0.19318959403219,0,0,0,0,0,1.84130094602871,0.572895513439397,1.20297227640581,3.42541259885321,3.0215755895588,0.675022500231806,3.15224842256954,3.17199686288943,2.07104124700728,0,0,0.170733605754134,0,0,0.367687016900028,0.222246727801615,0,0,0,0,0.565879024158229,0.187283014939765,0.320125762024346,0.17230640686684,0,0.231768651889711,0.964546102318525,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0.355905054372522,0.492522411877817,0,0.309873682371932,0.192906610981141,0,0.467863216890817,0,0,0.441182838239031,0 | ||
|short_description=p5@Ppp1r16b | |short_description=p5@Ppp1r16b | ||
}} | }} |
Latest revision as of 01:20, 26 September 2015
Short description: | p5@Ppp1r16b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ppp1r16b_5end |
Coexpression cluster: | MCL_coexpression_mm9:3325 |
Association with transcript: | 56bp_to_ENSMUST00000163423, NM_001159662, uc008nqo.2, uc008nqp.2_5end |
EntrezGene: | Ppp1r16b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data