FFCP PHASE1:Mm9::chr17:24625682..24625716,+: Difference between revisions
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{{FFCP|EntrezGene=268932|HGNC=|MCL_coexpression_id=1|UniProt=Q6P9K8|association_with_transcript=-11bp_to_ENSMUST00000024958,ENSMUST00000088474,ENSMUST00000115347,NM_027937,uc008awm.1,uc008awo.1,uc008awp.2,uc012amk.1_5end|description=CAGE_peak_4_at_Caskin1_5end|id=chr17:24625682..24625716,+|ontology_enrichment_celltype=CL:0000117!1.13e-13!23;CL:0000337!1.13e-13!23;CL:0000221!1.56e-11!44;CL:0000133!1.56e-11!44;CL:0000540!2.95e-11!33;CL:0000047!2.95e-11!33;CL:0000031!2.95e-11!33;CL:0000404!2.95e-11!33;CL:0002319!4.64e-11!43;CL:0000393!5.68e-08!39;CL:0000211!5.68e-08!39;CL:0000055!8.06e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.57e-23,23;CL:0000337,3.57e-23,23;CL:0000540,3.23e-17,33;CL:0000047,3.23e-17,33;CL:0000031,3.23e-17,33;CL:0000404,3.23e-17,33;CL:0000221,1.01e-13,44;CL:0000133,1.01e-13,44;CL:0000393,1.60e-13,39;CL:0000211,1.60e-13,39;CL:0002319,6.21e-13,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!8.33e-31!102;UBERON:0000924!8.33e-31!102;UBERON:0006601!8.33e-31!102;UBERON:0001017!2.69e-30!73;UBERON:0005743!2.69e-30!73;UBERON:0000073!8.64e-30!75;UBERON:0001016!8.64e-30!75;UBERON:0002346!1.17e-29!71;UBERON:0003075!1.17e-29!71;UBERON:0007284!1.17e-29!71;UBERON:0000033!3.38e-28!63;UBERON:0001049!5.94e-28!52;UBERON:0005068!5.94e-28!52;UBERON:0006241!5.94e-28!52;UBERON:0007135!5.94e-28!52;UBERON:0000955!8.25e-27!50;UBERON:0006238!8.25e-27!50;UBERON:0002616!5.76e-26!49;UBERON:0002020!2.95e-22!34;UBERON:0003080!3.93e-22!40;UBERON:0003056!4.71e-22!49;UBERON:0002780!2.23e-21!39;UBERON:0001890!2.23e-21!39;UBERON:0006240!2.23e-21!39;UBERON:0002791!4.16e-19!29;UBERON:0003528!4.16e-19!29;UBERON:0001893!4.16e-19!29;UBERON:0000153!3.03e-14!94;UBERON:0000956!4.17e-14!21;UBERON:0001869!4.17e-14!21;UBERON:0000203!4.17e-14!21;UBERON:0007811!9.09e-14!86;UBERON:0002619!6.22e-12!17;UBERON:0002021!7.13e-09!10;UBERON:0000411!7.13e-09!10;UBERON:0001950!7.13e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.36e-44,54;UBERON:0001017,2.43e-43,73;UBERON:0001016,8.55e-42,75;UBERON:0001049,3.09e-41,52;UBERON:0005068,3.09e-41,52;UBERON:0006241,3.09e-41,52;UBERON:0007135,3.09e-41,52;UBERON:0002020,7.86e-36,34;UBERON:0000955,2.98e-35,47;UBERON:0006238,2.98e-35,47;UBERON:0004121,3.10e-34,95;UBERON:0000924,3.10e-34,95;UBERON:0006601,3.10e-34,95;UBERON:0002616,9.42e-34,46;UBERON:0002346,9.07e-33,64;UBERON:0003075,9.07e-33,64;UBERON:0007284,9.07e-33,64;UBERON:0003080,6.78e-31,40;UBERON:0010371,3.04e-30,73;UBERON:0003528,9.22e-30,29;UBERON:0002791,9.22e-30,29;UBERON:0001893,9.22e-30,29;UBERON:0002780,1.60e-29,39;UBERON:0001890,1.60e-29,39;UBERON:0006240,1.60e-29,39;UBERON:0003056,5.84e-25,49;UBERON:0010314,1.41e-23,92;UBERON:0000956,3.48e-20,21;UBERON:0001869,3.48e-20,21;UBERON:0000203,3.48e-20,21;UBERON:0002619,5.42e-16,17;UBERON:0002021,8.48e-16,10;UBERON:0000411,8.48e-16,10;UBERON:0001950,8.48e-16,10;UBERON:0004111,3.94e-12,122;UBERON:0000025,4.11e-12,114;UBERON:0002420,1.30e-10,8;UBERON:0007245,1.30e-10,8;UBERON:0010009,1.30e-10,8;UBERON:0010011,1.30e-10,8;UBERON:0000454,1.30e-10,8;UBERON:0003076,3.39e-10,12;UBERON:0003057,3.39e-10,12;UBERON:0002240,3.05e-08,6;UBERON:0005174,3.05e-08,6;UBERON:0001137,3.05e-08,6;UBERON:0011216,4.80e-08,194;UBERON:0001948,4.57e-07,5;UBERON:0002315,4.57e-07,5;UBERON:0000369,5.17e-07,5;UBERON:0002435,5.17e-07,5;UBERON:0000204,5.17e-07,5;UBERON:0010082,5.17e-07,5|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.65407546914134,0.878744730937887,0.777719596297134,0.279972843250725,0,0,0,0,0,0,0,1.82084814773638,1.5869729378161,1.26766280701236,0,0,0,0,0,0.599200221036809,3.07374644257244,1.76272340924412,1.21505344498522,1.89292465216244,5.71301968807607,4.19650227808066,2.08234358665422,1.72521847832825,0.919218786610021,3.30347642998166,5.49055553766307,4.6081959976873,2.37395317914349,2.19570344645783,1.04182674111352,5.58365998002762,4.50210088025344,5.04234217663473,3.83017161115768,4.9830088279686,1.4911955666024,0.151452386666368,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,0,0,0,0.11418387971906,0,1.33597925158342,0.173485326766136,0.913396434936424,0.922461989024234,0.753613202763113,0.705532242814229,1.0053327306374,1.23597483867187,0.289198713839823,0,0.485300549842228,0,0,0,5.27005434620785,3.35114730901528,0,0,0,0,7.78911324905078,8.23501085073528,8.79580464790051,8.34356736922927,6.13717097592793,6.85700547046548,8.92326946872667,0.509196819251581,0.248813941220186,0.252722758433675,0,0.130120442962704,0.459804208866946,0.360124259610698,0.452114453507145,0.544291993210623,0.640568601424249,0.843315521037559,1.29351685369508,0.215567992932842,0.378212160335639,0.527853372491847,0.657587197282725,0.556094498451196,0.348252166522167,0.205782136407943,0.995171334092466,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,10.9350773253346,4.32199371992995,0,0.264450566663544,0,0.232236671860439,0,0,0.444756087689741,0,0,0,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.350679099451593,0.379419222745544,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0.478364305972461,0,0,0,0,0,0,0,3.05046120976805,4.33683240391152,0,0,0,0.390438744296638,0.430846795465598,0,0.891194696329576,0,0,0.292255857911312,1.18586333383957,9.63963949265421,0.709700426041343,0.35613120733451,0.81443479676788,0,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0.129358683782755,0.214337035031592,0.886701168211368,1.60531935841864,0.658196082408484,1.2178597964584,1.40803024838226,1.27099242518292,0,0,0,0.180938774784468,0,0.164140899745061,0,4.63563255026274,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.216010681643603,0.209088296014469,0,0.134864346384821,0.661227645802687,0,0,0.621339313086926,0,0.747582730219894,0.496375471371293,0.583353565032143,0.904118764344118,0.675824501963113,1.05621514781179,1.0416350787516,1.99232754408851,1.20792060413003,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0.448569283047378,0.335769232728157,0,0,0,0.214368379079066,0,8.471277639256,11.0478056761722,9.73922372846974,10.1393377582776,7.53590771747707,6.7985450765073,11.4753825039407,9.00642406448441,8.15656336171568,8.28416498802912,0,0.399024873401031,0.341467211508268,0.729320151204882,0.419226325255965,0.367687016900028,0.666740183404846,0.618105171716683,0.64183841918363,0.252697211763798,1.01391719956096,0.565879024158229,0.749132059759059,0.384150914429216,0.861532034334199,0,0.811190281613988,0,0.824171801606613,0.441596760403192,0.342869252385415,0.354951612318675,0.476872379894642,0.581385666529314,0.564656282491984,0.846146078916765,0.73171189149109,0.789209134313529,1.08643291076689,0,0.474540072496697,0.689531376628944,1.22769312950907,0.77468420592983,0.964533054905707,1.49886346762768,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0|short_description=p4@Caskin1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=268932 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q6P9K8 | |||
|association_with_transcript=-11bp_to_ENSMUST00000024958,ENSMUST00000088474,ENSMUST00000115347,NM_027937,uc008awm.1,uc008awo.1,uc008awp.2,uc012amk.1_5end | |||
|cluster_id=chr17:24625682..24625716,+ | |||
|description=CAGE_peak_4_at_Caskin1_5end | |||
|id=chr17:24625682..24625716,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.13e-13!23;CL:0000337!1.13e-13!23;CL:0000221!1.56e-11!44;CL:0000133!1.56e-11!44;CL:0000540!2.95e-11!33;CL:0000047!2.95e-11!33;CL:0000031!2.95e-11!33;CL:0000404!2.95e-11!33;CL:0002319!4.64e-11!43;CL:0000393!5.68e-08!39;CL:0000211!5.68e-08!39;CL:0000055!8.06e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.57e-23,23;CL:0000337,3.57e-23,23;CL:0000540,3.23e-17,33;CL:0000047,3.23e-17,33;CL:0000031,3.23e-17,33;CL:0000404,3.23e-17,33;CL:0000221,1.01e-13,44;CL:0000133,1.01e-13,44;CL:0000393,1.60e-13,39;CL:0000211,1.60e-13,39;CL:0002319,6.21e-13,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!8.33e-31!102;UBERON:0000924!8.33e-31!102;UBERON:0006601!8.33e-31!102;UBERON:0001017!2.69e-30!73;UBERON:0005743!2.69e-30!73;UBERON:0000073!8.64e-30!75;UBERON:0001016!8.64e-30!75;UBERON:0002346!1.17e-29!71;UBERON:0003075!1.17e-29!71;UBERON:0007284!1.17e-29!71;UBERON:0000033!3.38e-28!63;UBERON:0001049!5.94e-28!52;UBERON:0005068!5.94e-28!52;UBERON:0006241!5.94e-28!52;UBERON:0007135!5.94e-28!52;UBERON:0000955!8.25e-27!50;UBERON:0006238!8.25e-27!50;UBERON:0002616!5.76e-26!49;UBERON:0002020!2.95e-22!34;UBERON:0003080!3.93e-22!40;UBERON:0003056!4.71e-22!49;UBERON:0002780!2.23e-21!39;UBERON:0001890!2.23e-21!39;UBERON:0006240!2.23e-21!39;UBERON:0002791!4.16e-19!29;UBERON:0003528!4.16e-19!29;UBERON:0001893!4.16e-19!29;UBERON:0000153!3.03e-14!94;UBERON:0000956!4.17e-14!21;UBERON:0001869!4.17e-14!21;UBERON:0000203!4.17e-14!21;UBERON:0007811!9.09e-14!86;UBERON:0002619!6.22e-12!17;UBERON:0002021!7.13e-09!10;UBERON:0000411!7.13e-09!10;UBERON:0001950!7.13e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.36e-44,54;UBERON:0001017,2.43e-43,73;UBERON:0001016,8.55e-42,75;UBERON:0001049,3.09e-41,52;UBERON:0005068,3.09e-41,52;UBERON:0006241,3.09e-41,52;UBERON:0007135,3.09e-41,52;UBERON:0002020,7.86e-36,34;UBERON:0000955,2.98e-35,47;UBERON:0006238,2.98e-35,47;UBERON:0004121,3.10e-34,95;UBERON:0000924,3.10e-34,95;UBERON:0006601,3.10e-34,95;UBERON:0002616,9.42e-34,46;UBERON:0002346,9.07e-33,64;UBERON:0003075,9.07e-33,64;UBERON:0007284,9.07e-33,64;UBERON:0003080,6.78e-31,40;UBERON:0010371,3.04e-30,73;UBERON:0003528,9.22e-30,29;UBERON:0002791,9.22e-30,29;UBERON:0001893,9.22e-30,29;UBERON:0002780,1.60e-29,39;UBERON:0001890,1.60e-29,39;UBERON:0006240,1.60e-29,39;UBERON:0003056,5.84e-25,49;UBERON:0010314,1.41e-23,92;UBERON:0000956,3.48e-20,21;UBERON:0001869,3.48e-20,21;UBERON:0000203,3.48e-20,21;UBERON:0002619,5.42e-16,17;UBERON:0002021,8.48e-16,10;UBERON:0000411,8.48e-16,10;UBERON:0001950,8.48e-16,10;UBERON:0004111,3.94e-12,122;UBERON:0000025,4.11e-12,114;UBERON:0002420,1.30e-10,8;UBERON:0007245,1.30e-10,8;UBERON:0010009,1.30e-10,8;UBERON:0010011,1.30e-10,8;UBERON:0000454,1.30e-10,8;UBERON:0003076,3.39e-10,12;UBERON:0003057,3.39e-10,12;UBERON:0002240,3.05e-08,6;UBERON:0005174,3.05e-08,6;UBERON:0001137,3.05e-08,6;UBERON:0011216,4.80e-08,194;UBERON:0001948,4.57e-07,5;UBERON:0002315,4.57e-07,5;UBERON:0000369,5.17e-07,5;UBERON:0002435,5.17e-07,5;UBERON:0000204,5.17e-07,5;UBERON:0010082,5.17e-07,5 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.65407546914134,0.878744730937887,0.777719596297134,0.279972843250725,0,0,0,0,0,0,0,1.82084814773638,1.5869729378161,1.26766280701236,0,0,0,0,0,0.599200221036809,3.07374644257244,1.76272340924412,1.21505344498522,1.89292465216244,5.71301968807607,4.19650227808066,2.08234358665422,1.72521847832825,0.919218786610021,3.30347642998166,5.49055553766307,4.6081959976873,2.37395317914349,2.19570344645783,1.04182674111352,5.58365998002762,4.50210088025344,5.04234217663473,3.83017161115768,4.9830088279686,1.4911955666024,0.151452386666368,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,0,0,0,0.11418387971906,0,1.33597925158342,0.173485326766136,0.913396434936424,0.922461989024234,0.753613202763113,0.705532242814229,1.0053327306374,1.23597483867187,0.289198713839823,0,0.485300549842228,0,0,0,5.27005434620785,3.35114730901528,0,0,0,0,7.78911324905078,8.23501085073528,8.79580464790051,8.34356736922927,6.13717097592793,6.85700547046548,8.92326946872667,0.509196819251581,0.248813941220186,0.252722758433675,0,0.130120442962704,0.459804208866946,0.360124259610698,0.452114453507145,0.544291993210623,0.640568601424249,0.843315521037559,1.29351685369508,0.215567992932842,0.378212160335639,0.527853372491847,0.657587197282725,0.556094498451196,0.348252166522167,0.205782136407943,0.995171334092466,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,10.9350773253346,4.32199371992995,0,0.264450566663544,0,0.232236671860439,0,0,0.444756087689741,0,0,0,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.350679099451593,0.379419222745544,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0.478364305972461,0,0,0,0,0,0,0,3.05046120976805,4.33683240391152,0,0,0,0.390438744296638,0.430846795465598,0,0.891194696329576,0,0,0.292255857911312,1.18586333383957,9.63963949265421,0.709700426041343,0.35613120733451,0.81443479676788,0,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0.129358683782755,0.214337035031592,0.886701168211368,1.60531935841864,0.658196082408484,1.2178597964584,1.40803024838226,1.27099242518292,0,0,0,0.180938774784468,0,0.164140899745061,0,4.63563255026274,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.216010681643603,0.209088296014469,0,0.134864346384821,0.661227645802687,0,0,0.621339313086926,0,0.747582730219894,0.496375471371293,0.583353565032143,0.904118764344118,0.675824501963113,1.05621514781179,1.0416350787516,1.99232754408851,1.20792060413003,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0.448569283047378,0.335769232728157,0,0,0,0.214368379079066,0,8.471277639256,11.0478056761722,9.73922372846974,10.1393377582776,7.53590771747707,6.7985450765073,11.4753825039407,9.00642406448441,8.15656336171568,8.28416498802912,0,0.399024873401031,0.341467211508268,0.729320151204882,0.419226325255965,0.367687016900028,0.666740183404846,0.618105171716683,0.64183841918363,0.252697211763798,1.01391719956096,0.565879024158229,0.749132059759059,0.384150914429216,0.861532034334199,0,0.811190281613988,0,0.824171801606613,0.441596760403192,0.342869252385415,0.354951612318675,0.476872379894642,0.581385666529314,0.564656282491984,0.846146078916765,0.73171189149109,0.789209134313529,1.08643291076689,0,0.474540072496697,0.689531376628944,1.22769312950907,0.77468420592983,0.964533054905707,1.49886346762768,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0 | |||
|short_description=p4@Caskin1 | |||
}} |
Latest revision as of 01:34, 26 September 2015
Short description: | p4@Caskin1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Caskin1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -11bp_to_ENSMUST00000024958, ENSMUST00000088474, ENSMUST00000115347, NM_027937, uc008awm.1, uc008awo.1, uc008awp.2, uc012amk.1_5end |
EntrezGene: | Caskin1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.57e-23 | 23 |
neuroblast (sensu Vertebrata) | 3.57e-23 | 23 |
neuron | 3.23e-17 | 33 |
neuronal stem cell | 3.23e-17 | 33 |
neuroblast | 3.23e-17 | 33 |
electrically signaling cell | 3.23e-17 | 33 |
ectodermal cell | 1.01e-13 | 44 |
neurectodermal cell | 1.01e-13 | 44 |
electrically responsive cell | 1.60e-13 | 39 |
electrically active cell | 1.60e-13 | 39 |
neural cell | 6.21e-13 | 43 |