FFCP PHASE1:Mm9::chr11:98614826..98614845,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21833 | |EntrezGene=21833 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1283 | |||
|TSSclassifier=NA | |||
|UniProt=P63058 | |UniProt=P63058 | ||
|association_with_transcript=-54bp_to_ENSMUST00000124072_5end | |association_with_transcript=-54bp_to_ENSMUST00000124072_5end | ||
|cluster_id=chr11:98614826..98614845,+ | |||
|description=CAGE_peak_9_at_Thra_5end | |description=CAGE_peak_9_at_Thra_5end | ||
|id=chr11:98614826..98614845,+ | |id=chr11:98614826..98614845,+ | ||
|ontology_enrichment_celltype=CL:0000117!4.85e-13!23;CL:0000337!4.85e-13!23;CL:0000540!1.97e-09!33;CL:0000047!1.97e-09!33;CL:0000031!1.97e-09!33;CL:0000404!1.97e-09!33;CL:0002319!1.09e-08!43;CL:0000221!2.03e-08!44;CL:0000133!2.03e-08!44;CL:0000393!6.01e-08!39;CL:0000211!6.01e-08!39;CL:0000055!6.72e-08!50 | |ontology_enrichment_celltype=CL:0000117!4.85e-13!23;CL:0000337!4.85e-13!23;CL:0000540!1.97e-09!33;CL:0000047!1.97e-09!33;CL:0000031!1.97e-09!33;CL:0000404!1.97e-09!33;CL:0002319!1.09e-08!43;CL:0000221!2.03e-08!44;CL:0000133!2.03e-08!44;CL:0000393!6.01e-08!39;CL:0000211!6.01e-08!39;CL:0000055!6.72e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.52e-30,23;CL:0000337,5.52e-30,23;CL:0000540,4.64e-19,33;CL:0000047,4.64e-19,33;CL:0000031,4.64e-19,33;CL:0000404,4.64e-19,33;CL:0002319,7.38e-18,43;CL:0000221,2.67e-17,44;CL:0000133,2.67e-17,44;CL:0000393,3.21e-15,39;CL:0000211,3.21e-15,39;CL:0002321,1.66e-08,70;CL:0002609,1.13e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.59e-21!73;UBERON:0005743!2.59e-21!73;UBERON:0000073!9.30e-20!75;UBERON:0001016!9.30e-20!75;UBERON:0001049!9.32e-20!52;UBERON:0005068!9.32e-20!52;UBERON:0006241!9.32e-20!52;UBERON:0007135!9.32e-20!52;UBERON:0002020!2.59e-19!34;UBERON:0000955!1.27e-18!50;UBERON:0006238!1.27e-18!50;UBERON:0002616!5.05e-18!49;UBERON:0000033!6.06e-17!63;UBERON:0002791!4.00e-16!29;UBERON:0003528!4.00e-16!29;UBERON:0001893!4.00e-16!29;UBERON:0002346!6.75e-16!71;UBERON:0003075!6.75e-16!71;UBERON:0007284!6.75e-16!71;UBERON:0003056!3.69e-15!49;UBERON:0003080!4.20e-15!40;UBERON:0004121!6.38e-15!102;UBERON:0000924!6.38e-15!102;UBERON:0006601!6.38e-15!102;UBERON:0002780!1.27e-14!39;UBERON:0001890!1.27e-14!39;UBERON:0006240!1.27e-14!39;UBERON:0000956!4.19e-13!21;UBERON:0001869!4.19e-13!21;UBERON:0000203!4.19e-13!21;UBERON:0002619!5.23e-11!17;UBERON:0000025!8.91e-11!114;UBERON:0004111!6.98e-09!122;UBERON:0007811!5.35e-08!86;UBERON:0002021!6.56e-08!10;UBERON:0000411!6.56e-08!10;UBERON:0001950!6.56e-08!10;UBERON:0000153!2.30e-07!94 | |ontology_enrichment_uberon=UBERON:0001017!2.59e-21!73;UBERON:0005743!2.59e-21!73;UBERON:0000073!9.30e-20!75;UBERON:0001016!9.30e-20!75;UBERON:0001049!9.32e-20!52;UBERON:0005068!9.32e-20!52;UBERON:0006241!9.32e-20!52;UBERON:0007135!9.32e-20!52;UBERON:0002020!2.59e-19!34;UBERON:0000955!1.27e-18!50;UBERON:0006238!1.27e-18!50;UBERON:0002616!5.05e-18!49;UBERON:0000033!6.06e-17!63;UBERON:0002791!4.00e-16!29;UBERON:0003528!4.00e-16!29;UBERON:0001893!4.00e-16!29;UBERON:0002346!6.75e-16!71;UBERON:0003075!6.75e-16!71;UBERON:0007284!6.75e-16!71;UBERON:0003056!3.69e-15!49;UBERON:0003080!4.20e-15!40;UBERON:0004121!6.38e-15!102;UBERON:0000924!6.38e-15!102;UBERON:0006601!6.38e-15!102;UBERON:0002780!1.27e-14!39;UBERON:0001890!1.27e-14!39;UBERON:0006240!1.27e-14!39;UBERON:0000956!4.19e-13!21;UBERON:0001869!4.19e-13!21;UBERON:0000203!4.19e-13!21;UBERON:0002619!5.23e-11!17;UBERON:0000025!8.91e-11!114;UBERON:0004111!6.98e-09!122;UBERON:0007811!5.35e-08!86;UBERON:0002021!6.56e-08!10;UBERON:0000411!6.56e-08!10;UBERON:0001950!6.56e-08!10;UBERON:0000153!2.30e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.20e-41,34;UBERON:0000073,2.57e-39,54;UBERON:0001017,1.28e-37,73;UBERON:0001016,2.56e-36,75;UBERON:0001049,7.11e-36,52;UBERON:0005068,7.11e-36,52;UBERON:0006241,7.11e-36,52;UBERON:0007135,7.11e-36,52;UBERON:0003528,1.23e-33,29;UBERON:0002791,1.23e-33,29;UBERON:0001893,1.23e-33,29;UBERON:0002346,6.12e-29,64;UBERON:0003075,6.12e-29,64;UBERON:0007284,6.12e-29,64;UBERON:0000955,1.07e-28,47;UBERON:0006238,1.07e-28,47;UBERON:0003080,1.68e-28,40;UBERON:0004121,1.06e-27,95;UBERON:0000924,1.06e-27,95;UBERON:0006601,1.06e-27,95;UBERON:0002616,2.37e-27,46;UBERON:0002780,2.47e-27,39;UBERON:0001890,2.47e-27,39;UBERON:0006240,2.47e-27,39;UBERON:0000956,2.22e-24,21;UBERON:0001869,2.22e-24,21;UBERON:0000203,2.22e-24,21;UBERON:0010371,3.73e-24,73;UBERON:0003056,2.02e-23,49;UBERON:0002619,3.88e-21,17;UBERON:0010314,2.30e-18,92;UBERON:0002021,1.06e-17,10;UBERON:0000411,1.06e-17,10;UBERON:0001950,1.06e-17,10;UBERON:0000025,3.82e-14,114;UBERON:0004111,1.46e-12,122;UBERON:0002240,3.83e-10,6;UBERON:0005174,3.83e-10,6;UBERON:0001137,3.83e-10,6;UBERON:0002420,3.96e-10,8;UBERON:0007245,3.96e-10,8;UBERON:0010009,3.96e-10,8;UBERON:0010011,3.96e-10,8;UBERON:0000454,3.96e-10,8;UBERON:0001948,5.57e-09,5;UBERON:0002315,5.57e-09,5;UBERON:0000369,7.02e-09,5;UBERON:0002435,7.02e-09,5;UBERON:0000204,7.02e-09,5;UBERON:0010082,7.02e-09,5;UBERON:0011216,4.97e-08,194;UBERON:0003076,1.27e-07,12;UBERON:0003057,1.27e-07,12 | |||
|phase1_expression=0.480446541314382,0,0,0.30246421130683,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.425216450755349,0.0992909512008853,0,0,0,0.57423196411502,0,0.430942465371778,0.570070258369122,0.252030129759931,0,0,0.61506478758457,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0.405507724878058,0.183546752161682,0,1.09012578190223,0.659058548203415,1.1665793944457,0.279972843250725,0,0,0,0,0.257259436035947,0.573066879877513,0,1.21389876515759,2.11596391708813,1.26766280701236,0.338844532069132,0,0,0,0,0.898800331555214,3.84218305321555,2.07379224616955,6.48028503992115,1.89292465216244,1.99955689082663,2.20868540951614,0.734944795289724,2.39613677545591,2.75765635983006,3.30347642998166,1.91531007127782,2.76491759861238,2.63772575460388,3.47653045689157,2.6045668527838,2.51264699101243,0,1.83357897332172,2.06240009831567,3.84403538157578,1.67759501242771,0,0,0.579728977403356,0.860423876981386,0,0.539703191637817,0,0.448026887097336,0.280888840263504,0,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0,0.125666591329675,0,1.59059292611903,0,0.485300549842228,0,0,0,0.585561594023094,0.83778682725382,0.510914110417183,0.11981512450592,0,0,1.19832511523858,1.37250180845588,1.50785222535437,0.695297280769106,1.27857728665165,2.49345653471472,1.1356888414743,0.611036183101898,0,0,0,0.260240885925407,0.459804208866946,0.360124259610698,0.452114453507145,0.272145996605311,0.896796041993948,0.749613796477831,1.03481348295606,0,0,0,0.219195732427575,0.278047249225598,0.696504333044333,0.823128545631774,0.796137067273973,0,0,0,0.207125772535502,0,0.720248245844059,0.473489471170421,0.196764231747404,0.771335564436891,1.39520366850245,0,0.350296027101508,0.16455984991348,0.656669856316381,0.405344047729279,0.730999937126662,0.878200461164203,0,1.26173969138476,2.05809224758569,0.330418782983798,0,0,0,0.128867461322093,0.403367049246685,0.444756087689741,0.190225626112559,0.474529061544512,0,0.251335208800269,0.397912944082302,0.779856348476481,0,0.864552199498777,0.796565093017469,0.379335801906163,0.342745537829186,0,0,0.193952487167626,0.210407459670956,0.316182685621286,0.295220295959204,0.156998727841375,0.616985819609003,0,0.333690211432188,0,0.449724224769707,0,0.241177159752417,0,0,0,0.549122826376163,2.87536413054709,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.472905432318573,0,0.637819074629948,0.327726629431476,0.518054945597687,0.433947175744535,0,0,0,0,0.80275294993896,1.17211686592203,0.327869890753351,0.252470927204373,0,0.390438744296638,0,0,0.222798674082394,0,0.809621403349789,0.584511715822624,0.395287777946524,1.92792789853084,0.141940085208269,0.178065603667255,0.488660878060728,0,0,0,0,0.565815239267694,0.590603785761546,0,0,0,0.712994756769443,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0.428674070063185,0.177340233642274,0.178368817602071,0.329098041204242,0.913394847343798,0,0,0,0.49465875882444,0.807322133479528,0.542816324353403,0,0,0.582961673259701,1.29797711407357,0,0,0,0.188368457004691,0.27338845544205,0,0,0.139951452323658,0.276399947608848,0.954670618015114,0,0.203319467126849,0.432021363287205,0.418176592028937,0.87345025498471,0.269728692769641,0.330613822901344,0.523511883968059,0.129614973291793,0,0,0.448549638131936,0,1.36115831840833,1.54991788173277,1.18269287843545,0.58678619322877,1.17183946359555,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0.39736270956253,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.201652370273681,0,0.0962118416403295,0,0,0,0,0.167884616364078,0.19318959403219,0,0,0,0,6.7770221114048,5.06357760157895,6.87474616127276,3.95262319390481,2.05524755931193,3.7769694869485,3.37511250115903,2.70192721934532,1.35942722695261,1.55328093525546,0.31136204275253,0.798049746802062,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0,0.505394423527595,1.01391719956096,0,0.468207537349412,0.384150914429216,0.574354689556133,0,0.463537303779422,0.38581844092741,0.412085900803307,0.588795680537589,0.685738504770831,0.354951612318675,0.715308569841963,0.145346416632329,0.0941093804153306,0.25384382367503,0.548783918618318,0.526139422875686,0.407412341537585,0,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.999242311751784,0.935726433781634,0.429742108096597,1.14772999241306,0.220591419119515,0 | |phase1_expression=0.480446541314382,0,0,0.30246421130683,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.425216450755349,0.0992909512008853,0,0,0,0.57423196411502,0,0.430942465371778,0.570070258369122,0.252030129759931,0,0,0.61506478758457,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0.405507724878058,0.183546752161682,0,1.09012578190223,0.659058548203415,1.1665793944457,0.279972843250725,0,0,0,0,0.257259436035947,0.573066879877513,0,1.21389876515759,2.11596391708813,1.26766280701236,0.338844532069132,0,0,0,0,0.898800331555214,3.84218305321555,2.07379224616955,6.48028503992115,1.89292465216244,1.99955689082663,2.20868540951614,0.734944795289724,2.39613677545591,2.75765635983006,3.30347642998166,1.91531007127782,2.76491759861238,2.63772575460388,3.47653045689157,2.6045668527838,2.51264699101243,0,1.83357897332172,2.06240009831567,3.84403538157578,1.67759501242771,0,0,0.579728977403356,0.860423876981386,0,0.539703191637817,0,0.448026887097336,0.280888840263504,0,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0,0.125666591329675,0,1.59059292611903,0,0.485300549842228,0,0,0,0.585561594023094,0.83778682725382,0.510914110417183,0.11981512450592,0,0,1.19832511523858,1.37250180845588,1.50785222535437,0.695297280769106,1.27857728665165,2.49345653471472,1.1356888414743,0.611036183101898,0,0,0,0.260240885925407,0.459804208866946,0.360124259610698,0.452114453507145,0.272145996605311,0.896796041993948,0.749613796477831,1.03481348295606,0,0,0,0.219195732427575,0.278047249225598,0.696504333044333,0.823128545631774,0.796137067273973,0,0,0,0.207125772535502,0,0.720248245844059,0.473489471170421,0.196764231747404,0.771335564436891,1.39520366850245,0,0.350296027101508,0.16455984991348,0.656669856316381,0.405344047729279,0.730999937126662,0.878200461164203,0,1.26173969138476,2.05809224758569,0.330418782983798,0,0,0,0.128867461322093,0.403367049246685,0.444756087689741,0.190225626112559,0.474529061544512,0,0.251335208800269,0.397912944082302,0.779856348476481,0,0.864552199498777,0.796565093017469,0.379335801906163,0.342745537829186,0,0,0.193952487167626,0.210407459670956,0.316182685621286,0.295220295959204,0.156998727841375,0.616985819609003,0,0.333690211432188,0,0.449724224769707,0,0.241177159752417,0,0,0,0.549122826376163,2.87536413054709,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.472905432318573,0,0.637819074629948,0.327726629431476,0.518054945597687,0.433947175744535,0,0,0,0,0.80275294993896,1.17211686592203,0.327869890753351,0.252470927204373,0,0.390438744296638,0,0,0.222798674082394,0,0.809621403349789,0.584511715822624,0.395287777946524,1.92792789853084,0.141940085208269,0.178065603667255,0.488660878060728,0,0,0,0,0.565815239267694,0.590603785761546,0,0,0,0.712994756769443,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0.428674070063185,0.177340233642274,0.178368817602071,0.329098041204242,0.913394847343798,0,0,0,0.49465875882444,0.807322133479528,0.542816324353403,0,0,0.582961673259701,1.29797711407357,0,0,0,0.188368457004691,0.27338845544205,0,0,0.139951452323658,0.276399947608848,0.954670618015114,0,0.203319467126849,0.432021363287205,0.418176592028937,0.87345025498471,0.269728692769641,0.330613822901344,0.523511883968059,0.129614973291793,0,0,0.448549638131936,0,1.36115831840833,1.54991788173277,1.18269287843545,0.58678619322877,1.17183946359555,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0.39736270956253,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.201652370273681,0,0.0962118416403295,0,0,0,0,0.167884616364078,0.19318959403219,0,0,0,0,6.7770221114048,5.06357760157895,6.87474616127276,3.95262319390481,2.05524755931193,3.7769694869485,3.37511250115903,2.70192721934532,1.35942722695261,1.55328093525546,0.31136204275253,0.798049746802062,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0,0.505394423527595,1.01391719956096,0,0.468207537349412,0.384150914429216,0.574354689556133,0,0.463537303779422,0.38581844092741,0.412085900803307,0.588795680537589,0.685738504770831,0.354951612318675,0.715308569841963,0.145346416632329,0.0941093804153306,0.25384382367503,0.548783918618318,0.526139422875686,0.407412341537585,0,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.999242311751784,0.935726433781634,0.429742108096597,1.14772999241306,0.220591419119515,0 | ||
|short_description=p9@Thra | |short_description=p9@Thra | ||
}} | }} |
Latest revision as of 03:20, 26 September 2015
Short description: | p9@Thra |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Thra_5end |
Coexpression cluster: | MCL_coexpression_mm9:1283 |
Association with transcript: | -54bp_to_ENSMUST00000124072_5end |
EntrezGene: | Thra |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.52e-30 | 23 |
neuroblast (sensu Vertebrata) | 5.52e-30 | 23 |
neuron | 4.64e-19 | 33 |
neuronal stem cell | 4.64e-19 | 33 |
neuroblast | 4.64e-19 | 33 |
electrically signaling cell | 4.64e-19 | 33 |
neural cell | 7.38e-18 | 43 |
ectodermal cell | 2.67e-17 | 44 |
neurectodermal cell | 2.67e-17 | 44 |
electrically responsive cell | 3.21e-15 | 39 |
electrically active cell | 3.21e-15 | 39 |
embryonic cell | 1.66e-08 | 70 |
neuron of cerebral cortex | 1.13e-07 | 6 |