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FFCP PHASE1:Mm9::chr12:113749314..113749346,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=104885
|EntrezGene=104885
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8BHH9
|UniProt=Q8BHH9
|association_with_transcript=24bp_to_ENSMUST00000066791,NM_178915,uc007per.1_5end
|association_with_transcript=24bp_to_ENSMUST00000066791,NM_178915,uc007per.1_5end
|cluster_id=chr12:113749314..113749346,-
|description=CAGE_peak_2_at_Tmem179_5end
|description=CAGE_peak_2_at_Tmem179_5end
|id=chr12:113749314..113749346,-
|id=chr12:113749314..113749346,-
|ontology_enrichment_celltype=CL:0000540!9.83e-19!33;CL:0000047!9.83e-19!33;CL:0000031!9.83e-19!33;CL:0000404!9.83e-19!33;CL:0000221!8.10e-18!44;CL:0000133!8.10e-18!44;CL:0002319!2.34e-17!43;CL:0000117!2.61e-15!23;CL:0000337!2.61e-15!23;CL:0000393!1.61e-13!39;CL:0000211!1.61e-13!39;CL:0000055!1.43e-12!50
|ontology_enrichment_celltype_v019_2=CL:0000540,6.36e-24,33;CL:0000047,6.36e-24,33;CL:0000031,6.36e-24,33;CL:0000404,6.36e-24,33;CL:0000117,9.37e-22,23;CL:0000337,9.37e-22,23;CL:0000221,9.61e-20,44;CL:0000133,9.61e-20,44;CL:0002319,5.10e-19,43;CL:0000393,6.65e-19,39;CL:0000211,6.65e-19,39;CL:0002321,3.90e-09,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.18e-38!75;UBERON:0001016!3.18e-38!75;UBERON:0001017!2.44e-37!73;UBERON:0005743!2.44e-37!73;UBERON:0004121!1.47e-35!102;UBERON:0000924!1.47e-35!102;UBERON:0006601!1.47e-35!102;UBERON:0002346!6.16e-32!71;UBERON:0003075!6.16e-32!71;UBERON:0007284!6.16e-32!71;UBERON:0001049!1.62e-27!52;UBERON:0005068!1.62e-27!52;UBERON:0006241!1.62e-27!52;UBERON:0007135!1.62e-27!52;UBERON:0000033!3.00e-27!63;UBERON:0000955!2.90e-26!50;UBERON:0006238!2.90e-26!50;UBERON:0002616!1.46e-25!49;UBERON:0003056!6.92e-23!49;UBERON:0003080!2.01e-21!40;UBERON:0002020!5.63e-21!34;UBERON:0002780!1.31e-20!39;UBERON:0001890!1.31e-20!39;UBERON:0006240!1.31e-20!39;UBERON:0002791!1.57e-17!29;UBERON:0003528!1.57e-17!29;UBERON:0001893!1.57e-17!29;UBERON:0007811!2.81e-13!86;UBERON:0000956!8.42e-12!21;UBERON:0001869!8.42e-12!21;UBERON:0000203!8.42e-12!21;UBERON:0000153!2.79e-10!94;UBERON:0002619!3.00e-10!17;UBERON:0002021!1.06e-08!10;UBERON:0000411!1.06e-08!10;UBERON:0001950!1.06e-08!10;UBERON:0002420!4.73e-07!8;UBERON:0007245!4.73e-07!8;UBERON:0010009!4.73e-07!8;UBERON:0010011!4.73e-07!8;UBERON:0000454!4.73e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.75e-45,75;UBERON:0001017,6.26e-45,73;UBERON:0004121,4.29e-39,95;UBERON:0000924,4.29e-39,95;UBERON:0006601,4.29e-39,95;UBERON:0000073,5.99e-37,54;UBERON:0002346,2.66e-34,64;UBERON:0003075,2.66e-34,64;UBERON:0007284,2.66e-34,64;UBERON:0001049,3.44e-34,52;UBERON:0005068,3.44e-34,52;UBERON:0006241,3.44e-34,52;UBERON:0007135,3.44e-34,52;UBERON:0010371,3.07e-31,73;UBERON:0002020,1.03e-30,34;UBERON:0000955,2.76e-28,47;UBERON:0006238,2.76e-28,47;UBERON:0002616,3.36e-27,46;UBERON:0003528,6.45e-25,29;UBERON:0002791,6.45e-25,29;UBERON:0001893,6.45e-25,29;UBERON:0003080,1.41e-24,40;UBERON:0003056,9.18e-24,49;UBERON:0002780,2.56e-23,39;UBERON:0001890,2.56e-23,39;UBERON:0006240,2.56e-23,39;UBERON:0010314,7.24e-23,92;UBERON:0002619,1.12e-15,17;UBERON:0000956,2.00e-15,21;UBERON:0001869,2.00e-15,21;UBERON:0000203,2.00e-15,21;UBERON:0002021,8.92e-14,10;UBERON:0000411,8.92e-14,10;UBERON:0001950,8.92e-14,10;UBERON:0002420,5.81e-11,8;UBERON:0007245,5.81e-11,8;UBERON:0010009,5.81e-11,8;UBERON:0010011,5.81e-11,8;UBERON:0000454,5.81e-11,8;UBERON:0003076,8.49e-10,12;UBERON:0003057,8.49e-10,12;UBERON:0004111,1.40e-09,122;UBERON:0000025,5.10e-09,114;UBERON:0011216,6.99e-09,194;UBERON:0002240,3.93e-08,6;UBERON:0005174,3.93e-08,6;UBERON:0001137,3.93e-08,6;UBERON:0002950,3.71e-07,4;UBERON:0001891,3.71e-07,4;UBERON:0009616,3.71e-07,4;UBERON:0010286,3.71e-07,4;UBERON:0001948,6.11e-07,5;UBERON:0002315,6.11e-07,5
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0,0.139986421625363,0,0,0,0,0,0,0,7.48570905180512,6.34789175126439,6.97214543856797,0.677689064138264,0,0.449949858640699,0,0,0.898800331555214,1.53687322128622,0.829516898467821,1.4850653216486,0.841299845405528,12.8542942981712,11.7060326704355,2.44981598429908,1.72521847832825,3.67687514644008,12.1127469099328,18.0039146700115,19.2008166570304,9.10015385338338,7.41049913179518,6.25096044668112,26.5223849051312,42.7699583624077,28.8788688298171,9.1334861496837,9.681274294339,7.82877672466262,0.832988126665025,1.20914496170857,0,0,0,0,0,0,0.983110940922263,0,0,0,1.40843419776681,0,0,0,0.216491041011214,0,0,0.22836775943812,0,1.03909497345377,0.520455980298408,0.913396434936424,0.461230994512117,0.452167921657868,0.117588707135705,0.376999773989026,0,0,0,0.161766849947409,0,0,0,1.46390398505774,2.09446706813455,0,0,0,0,17.3757141709594,15.0975198930147,3.8952849154988,12.8629996942285,17.9000820131231,13.9217989854905,17.6842976743856,0,0,0,0.841767423545896,0,0.689706313300419,0.360124259610698,0.30140963567143,1.08858398642125,1.0249097622788,1.78033276663485,1.81092359517311,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8276868624118,2.88132914661996,0,0.264450566663544,0.426576501070468,0,0.38660238396628,0,0.444756087689741,0,0,0.329397909448022,0.251335208800269,0.397912944082302,0.779856348476481,0.898819408654221,0.216138049874694,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6972613587304,18.9882932279369,0,0,0.631016438832513,1.17131623288992,1.93881057959519,0.238968797952552,0.891194696329576,1.41538265394416,1.21443210502468,1.16902343164525,1.97643888973262,8.67567554338879,0,0.35613120733451,0.162886959353576,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0.356497378384721,0.632073515871632,0,0,3.74483566329167,0.18006109403131,0.129358683782755,0.857348140126369,0.354680467284547,0.891844088010353,0.987294123612726,1.2178597964584,0,0.42366414172764,1.7642271844397,0.16488625294148,0,0,0,0,0,13.1651964427462,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0.259229946583586,0,0,0.149516546043979,0,0.388902376688095,0,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,14.6835479080437,13.3494318587081,21.7700295106971,19.7631159695241,13.0165678756422,16.6186657425734,10.8003600037089,12.6089936902782,10.8754178156209,13.9795284172991,0,0.399024873401031,0.853668028770671,0.243106717068294,0.628839487883947,0.735374033800057,0.888986911206461,0.206035057238894,0.962757628775446,0.252697211763798,1.52087579934144,0.377252682772152,0.561849044819294,0.960377286073039,0.861532034334199,0.952587382566147,0.811190281613988,0.192909220463705,0,0.883193520806384,0.685738504770831,0.70990322463735,1.43061713968393,1.0174249164263,1.41164070622996,0.676916863133412,1.28049581010941,0.789209134313529,0.950628796921032,2.24456908663095,1.06771516311757,1.18205378850676,2.04615521584845,0.77468420592983,0.385813221962283,2.24829520144151,0.701794825336225,0.214871054048298,0.57386499620653,0.441182838239031,0.463735671240843
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0,0.139986421625363,0,0,0,0,0,0,0,7.48570905180512,6.34789175126439,6.97214543856797,0.677689064138264,0,0.449949858640699,0,0,0.898800331555214,1.53687322128622,0.829516898467821,1.4850653216486,0.841299845405528,12.8542942981712,11.7060326704355,2.44981598429908,1.72521847832825,3.67687514644008,12.1127469099328,18.0039146700115,19.2008166570304,9.10015385338338,7.41049913179518,6.25096044668112,26.5223849051312,42.7699583624077,28.8788688298171,9.1334861496837,9.681274294339,7.82877672466262,0.832988126665025,1.20914496170857,0,0,0,0,0,0,0.983110940922263,0,0,0,1.40843419776681,0,0,0,0.216491041011214,0,0,0.22836775943812,0,1.03909497345377,0.520455980298408,0.913396434936424,0.461230994512117,0.452167921657868,0.117588707135705,0.376999773989026,0,0,0,0.161766849947409,0,0,0,1.46390398505774,2.09446706813455,0,0,0,0,17.3757141709594,15.0975198930147,3.8952849154988,12.8629996942285,17.9000820131231,13.9217989854905,17.6842976743856,0,0,0,0.841767423545896,0,0.689706313300419,0.360124259610698,0.30140963567143,1.08858398642125,1.0249097622788,1.78033276663485,1.81092359517311,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8276868624118,2.88132914661996,0,0.264450566663544,0.426576501070468,0,0.38660238396628,0,0.444756087689741,0,0,0.329397909448022,0.251335208800269,0.397912944082302,0.779856348476481,0.898819408654221,0.216138049874694,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6972613587304,18.9882932279369,0,0,0.631016438832513,1.17131623288992,1.93881057959519,0.238968797952552,0.891194696329576,1.41538265394416,1.21443210502468,1.16902343164525,1.97643888973262,8.67567554338879,0,0.35613120733451,0.162886959353576,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0.356497378384721,0.632073515871632,0,0,3.74483566329167,0.18006109403131,0.129358683782755,0.857348140126369,0.354680467284547,0.891844088010353,0.987294123612726,1.2178597964584,0,0.42366414172764,1.7642271844397,0.16488625294148,0,0,0,0,0,13.1651964427462,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0.259229946583586,0,0,0.149516546043979,0,0.388902376688095,0,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,14.6835479080437,13.3494318587081,21.7700295106971,19.7631159695241,13.0165678756422,16.6186657425734,10.8003600037089,12.6089936902782,10.8754178156209,13.9795284172991,0,0.399024873401031,0.853668028770671,0.243106717068294,0.628839487883947,0.735374033800057,0.888986911206461,0.206035057238894,0.962757628775446,0.252697211763798,1.52087579934144,0.377252682772152,0.561849044819294,0.960377286073039,0.861532034334199,0.952587382566147,0.811190281613988,0.192909220463705,0,0.883193520806384,0.685738504770831,0.70990322463735,1.43061713968393,1.0174249164263,1.41164070622996,0.676916863133412,1.28049581010941,0.789209134313529,0.950628796921032,2.24456908663095,1.06771516311757,1.18205378850676,2.04615521584845,0.77468420592983,0.385813221962283,2.24829520144151,0.701794825336225,0.214871054048298,0.57386499620653,0.441182838239031,0.463735671240843
|short_description=p2@Tmem179
|short_description=p2@Tmem179
}}
}}

Latest revision as of 09:06, 26 September 2015

Short description:p2@Tmem179
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Tmem179_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 24bp_to_ENSMUST00000066791, NM_178915, uc007per.1_5end
EntrezGene:Tmem179
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Tmem179

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.81
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.49
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.71
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.10
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E426.52
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E542.77
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I628.88
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.83
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A417.38
corpus striatum, adult.CNhs10487.19-21D815.10
corpus striatum, neonate N00.CNhs11226.630-43F13.90
cortex, adult.CNhs10473.12-14D512.86
cortex, neonate N30.CNhs11107.1392-42F217.90
diencephalon, adult.CNhs10482.20-12F213.92
diencephalon, neonate N30.CNhs11201.1388-42B217.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E812.83
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C216.70
medulla oblongata, neonate N30.CNhs11200.1396-42A318.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I98.68
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C913.17
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.68
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.35
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.77
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A516.62
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.98
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron6.36e-2433
neuronal stem cell6.36e-2433
neuroblast6.36e-2433
electrically signaling cell6.36e-2433
CNS neuron (sensu Vertebrata)9.37e-2223
neuroblast (sensu Vertebrata)9.37e-2223
ectodermal cell9.61e-2044
neurectodermal cell9.61e-2044
neural cell5.10e-1943
electrically responsive cell6.65e-1939
electrically active cell6.65e-1939
embryonic cell3.90e-0970

Uber anatomy
Ontology termp-valuen
nervous system5.75e-4575
central nervous system6.26e-4573
ectoderm-derived structure4.29e-3995
ectoderm4.29e-3995
presumptive ectoderm4.29e-3995
regional part of nervous system5.99e-3754
neurectoderm2.66e-3464
neural plate2.66e-3464
presumptive neural plate2.66e-3464
neural tube3.44e-3452
neural rod3.44e-3452
future spinal cord3.44e-3452
neural keel3.44e-3452
ecto-epithelium3.07e-3173
gray matter1.03e-3034
brain2.76e-2847
future brain2.76e-2847
regional part of brain3.36e-2746
brain grey matter6.45e-2529
regional part of telencephalon6.45e-2529
telencephalon6.45e-2529
anterior neural tube1.41e-2440
pre-chordal neural plate9.18e-2449
regional part of forebrain2.56e-2339
forebrain2.56e-2339
future forebrain2.56e-2339
structure with developmental contribution from neural crest7.24e-2392
regional part of cerebral cortex1.12e-1517
cerebral cortex2.00e-1521
cerebral hemisphere2.00e-1521
pallium2.00e-1521
occipital lobe8.92e-1410
visual cortex8.92e-1410
neocortex8.92e-1410
basal ganglion5.81e-118
nuclear complex of neuraxis5.81e-118
aggregate regional part of brain5.81e-118
collection of basal ganglia5.81e-118
cerebral subcortex5.81e-118
posterior neural tube8.49e-1012
chordal neural plate8.49e-1012
anatomical conduit1.40e-09122
tube5.10e-09114
organ system subdivision6.99e-09194
spinal cord3.93e-086
dorsal region element3.93e-086
dorsum3.93e-086
regional part of midbrain3.71e-074
midbrain3.71e-074
presumptive midbrain3.71e-074
midbrain neural tube3.71e-074
regional part of spinal cord6.11e-075
gray matter of spinal cord6.11e-075
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