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FFCP PHASE1:Mm9::chr5:9725305..9725345,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=108069
|EntrezGene=108069
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9QYS2
|UniProt=Q9QYS2
|association_with_transcript=6bp_to_ENSMUST00000004076,NM_181850,uc008wll.1_5end
|association_with_transcript=6bp_to_ENSMUST00000004076,NM_181850,uc008wll.1_5end
|cluster_id=chr5:9725305..9725345,-
|description=CAGE_peak_3_at_Grm3_5end
|description=CAGE_peak_3_at_Grm3_5end
|id=chr5:9725305..9725345,-
|id=chr5:9725305..9725345,-
|ontology_enrichment_celltype=CL:0000117!1.41e-09!23;CL:0000337!1.41e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.21e-16,23;CL:0000337,2.21e-16,23;CL:0000540,1.93e-11,33;CL:0000047,1.93e-11,33;CL:0000031,1.93e-11,33;CL:0000404,1.93e-11,33;CL:0000393,5.51e-09,39;CL:0000211,5.51e-09,39;CL:0002319,9.60e-08,43;CL:0000221,1.80e-07,44;CL:0000133,1.80e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!7.75e-22!52;UBERON:0005068!7.75e-22!52;UBERON:0006241!7.75e-22!52;UBERON:0007135!7.75e-22!52;UBERON:0000955!1.72e-20!50;UBERON:0006238!1.72e-20!50;UBERON:0001017!6.60e-20!73;UBERON:0005743!6.60e-20!73;UBERON:0002616!9.60e-20!49;UBERON:0000033!1.14e-19!63;UBERON:0000073!1.92e-19!75;UBERON:0001016!1.92e-19!75;UBERON:0002346!4.22e-18!71;UBERON:0003075!4.22e-18!71;UBERON:0007284!4.22e-18!71;UBERON:0002020!8.68e-18!34;UBERON:0004121!2.51e-15!102;UBERON:0000924!2.51e-15!102;UBERON:0006601!2.51e-15!102;UBERON:0003080!5.49e-15!40;UBERON:0003056!8.88e-15!49;UBERON:0002791!2.81e-14!29;UBERON:0003528!2.81e-14!29;UBERON:0001893!2.81e-14!29;UBERON:0002780!3.52e-14!39;UBERON:0001890!3.52e-14!39;UBERON:0006240!3.52e-14!39;UBERON:0000153!5.61e-10!94;UBERON:0007811!5.67e-10!86;UBERON:0002021!6.95e-10!10;UBERON:0000411!6.95e-10!10;UBERON:0001950!6.95e-10!10;UBERON:0000956!6.72e-09!21;UBERON:0001869!6.72e-09!21;UBERON:0000203!6.72e-09!21;UBERON:0002619!1.70e-08!17;UBERON:0003076!1.09e-07!12;UBERON:0003057!1.09e-07!12;UBERON:0002420!5.75e-07!8;UBERON:0007245!5.75e-07!8;UBERON:0010009!5.75e-07!8;UBERON:0010011!5.75e-07!8;UBERON:0000454!5.75e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.12e-34,54;UBERON:0001017,3.19e-33,73;UBERON:0001016,4.88e-32,75;UBERON:0001049,7.13e-32,52;UBERON:0005068,7.13e-32,52;UBERON:0006241,7.13e-32,52;UBERON:0007135,7.13e-32,52;UBERON:0002020,6.57e-29,34;UBERON:0000955,2.57e-25,47;UBERON:0006238,2.57e-25,47;UBERON:0002346,4.41e-24,64;UBERON:0003075,4.41e-24,64;UBERON:0007284,4.41e-24,64;UBERON:0002616,4.93e-24,46;UBERON:0004121,6.12e-23,95;UBERON:0000924,6.12e-23,95;UBERON:0006601,6.12e-23,95;UBERON:0003528,2.73e-22,29;UBERON:0002791,2.73e-22,29;UBERON:0001893,2.73e-22,29;UBERON:0010371,2.53e-21,73;UBERON:0003080,4.10e-20,40;UBERON:0002780,1.03e-18,39;UBERON:0001890,1.03e-18,39;UBERON:0006240,1.03e-18,39;UBERON:0002021,1.00e-17,10;UBERON:0000411,1.00e-17,10;UBERON:0001950,1.00e-17,10;UBERON:0003056,3.83e-15,49;UBERON:0010314,6.28e-15,92;UBERON:0002619,1.72e-13,17;UBERON:0003076,1.26e-12,12;UBERON:0003057,1.26e-12,12;UBERON:0000956,2.29e-12,21;UBERON:0001869,2.29e-12,21;UBERON:0000203,2.29e-12,21;UBERON:0002420,4.52e-12,8;UBERON:0007245,4.52e-12,8;UBERON:0010009,4.52e-12,8;UBERON:0010011,4.52e-12,8;UBERON:0000454,4.52e-12,8;UBERON:0002240,1.23e-09,6;UBERON:0005174,1.23e-09,6;UBERON:0001137,1.23e-09,6;UBERON:0000025,1.88e-09,114;UBERON:0004111,5.63e-09,122;UBERON:0001948,4.64e-08,5;UBERON:0002315,4.64e-08,5;UBERON:0000369,9.44e-08,5;UBERON:0002435,9.44e-08,5;UBERON:0000204,9.44e-08,5;UBERON:0010082,9.44e-08,5;UBERON:0002950,1.36e-07,4;UBERON:0001891,1.36e-07,4;UBERON:0009616,1.36e-07,4;UBERON:0010286,1.36e-07,4
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.58328969722285,0,0,0,0,0,0,0,0,2.42779753031517,2.64495489636016,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.270011876663381,0,3.42781181284564,5.52171352379034,0,0,0,6.60695285996332,11.2364857514965,11.5204899942183,2.37395317914349,3.11057988248193,1.04182674111352,6.42120897703176,14.069065250792,8.86229837105499,6.48182888042069,8.96941589034349,2.79599168737951,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.520455980298408,0.304465478312141,0,0,0.117588707135705,0,0,0.433798070759735,0,0,0,0,0,7.61230072230023,5.86450779077674,0,0,0,0,14.9790639404823,14.1825186873774,2.63874139437015,15.2965401769203,11.7629110371952,14.5451631191692,9.73447578406546,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.408218994907967,0.640568601424249,0.374806898238915,0.517406741478031,0,0.378212160335639,0.351902248327898,0,0,0.696504333044333,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0,11.1453672738987,5.04232600658494,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.456994050438915,0,0,0,0.140271639780637,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,16.8578119487182,13.3621322715112,0,0,0,0,0,0,0,0,0,0,0,8.03303291054518,0,0.178065603667255,0.81443479676788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0,0.120625849856312,0,0,0,13.5360470467672,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.324016022465404,0.209088296014469,0.436725127492355,0.269728692769641,0.330613822901344,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8130515932779,11.0478056761722,8.59343270159095,9.45192502890282,15.7568979547248,14.3524840504043,15.5255175053315,20.7147753483141,14.0474146785103,11.9084871702919,0,0.399024873401031,1.02440163452481,0.729320151204882,0.628839487883947,0,0.666740183404846,1.03017528619447,0.64183841918363,1.01078884705519,1.01391719956096,0.188626341386076,0.655490552289177,1.02440243847791,0.689225627467359,0.476293691283074,1.15884325944855,0.964546102318525,0,1.17759136107518,0.685738504770831,0.354951612318675,0.715308569841963,0.436039249896986,1.03520318456864,1.18460451048347,1.09756783723664,1.57841826862706,0.814824683075171,0.561142271657738,1.06771516311757,0.394017929502254,0.409231043169689,1.70430525304563,0.192906610981141,0.249810577937946,0.701794825336225,0.644613162144895,0.382576664137687,0.220591419119515,0
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.58328969722285,0,0,0,0,0,0,0,0,2.42779753031517,2.64495489636016,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.270011876663381,0,3.42781181284564,5.52171352379034,0,0,0,6.60695285996332,11.2364857514965,11.5204899942183,2.37395317914349,3.11057988248193,1.04182674111352,6.42120897703176,14.069065250792,8.86229837105499,6.48182888042069,8.96941589034349,2.79599168737951,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.520455980298408,0.304465478312141,0,0,0.117588707135705,0,0,0.433798070759735,0,0,0,0,0,7.61230072230023,5.86450779077674,0,0,0,0,14.9790639404823,14.1825186873774,2.63874139437015,15.2965401769203,11.7629110371952,14.5451631191692,9.73447578406546,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.408218994907967,0.640568601424249,0.374806898238915,0.517406741478031,0,0.378212160335639,0.351902248327898,0,0,0.696504333044333,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0,11.1453672738987,5.04232600658494,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.456994050438915,0,0,0,0.140271639780637,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,16.8578119487182,13.3621322715112,0,0,0,0,0,0,0,0,0,0,0,8.03303291054518,0,0.178065603667255,0.81443479676788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0,0.120625849856312,0,0,0,13.5360470467672,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.324016022465404,0.209088296014469,0.436725127492355,0.269728692769641,0.330613822901344,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8130515932779,11.0478056761722,8.59343270159095,9.45192502890282,15.7568979547248,14.3524840504043,15.5255175053315,20.7147753483141,14.0474146785103,11.9084871702919,0,0.399024873401031,1.02440163452481,0.729320151204882,0.628839487883947,0,0.666740183404846,1.03017528619447,0.64183841918363,1.01078884705519,1.01391719956096,0.188626341386076,0.655490552289177,1.02440243847791,0.689225627467359,0.476293691283074,1.15884325944855,0.964546102318525,0,1.17759136107518,0.685738504770831,0.354951612318675,0.715308569841963,0.436039249896986,1.03520318456864,1.18460451048347,1.09756783723664,1.57841826862706,0.814824683075171,0.561142271657738,1.06771516311757,0.394017929502254,0.409231043169689,1.70430525304563,0.192906610981141,0.249810577937946,0.701794825336225,0.644613162144895,0.382576664137687,0.220591419119515,0
|short_description=p3@Grm3
|short_description=p3@Grm3
}}
}}

Latest revision as of 09:51, 26 September 2015

Short description:p3@Grm3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Grm3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 6bp_to_ENSMUST00000004076, NM_181850, uc008wll.1_5end
EntrezGene:Grm3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Grm3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.86
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I25.86
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A414.98
corpus striatum, adult.CNhs10487.19-21D814.18
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D515.30
cortex, neonate N30.CNhs11107.1392-42F211.76
diencephalon, adult.CNhs10482.20-12F214.55
diencephalon, neonate N30.CNhs11201.1388-42B29.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E811.15
hippocampus, neonate N00.CNhs11228.627-43G15.04
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C216.86
medulla oblongata, neonate N30.CNhs11200.1396-42A313.36
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C913.54
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.81
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.45
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A615.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.21e-1623
neuroblast (sensu Vertebrata)2.21e-1623
neuron1.93e-1133
neuronal stem cell1.93e-1133
neuroblast1.93e-1133
electrically signaling cell1.93e-1133
electrically responsive cell5.51e-0939
electrically active cell5.51e-0939
neural cell9.60e-0843
ectodermal cell1.80e-0744
neurectodermal cell1.80e-0744

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.12e-3454
central nervous system3.19e-3373
nervous system4.88e-3275
neural tube7.13e-3252
neural rod7.13e-3252
future spinal cord7.13e-3252
neural keel7.13e-3252
gray matter6.57e-2934
brain2.57e-2547
future brain2.57e-2547
neurectoderm4.41e-2464
neural plate4.41e-2464
presumptive neural plate4.41e-2464
regional part of brain4.93e-2446
ectoderm-derived structure6.12e-2395
ectoderm6.12e-2395
presumptive ectoderm6.12e-2395
brain grey matter2.73e-2229
regional part of telencephalon2.73e-2229
telencephalon2.73e-2229
ecto-epithelium2.53e-2173
anterior neural tube4.10e-2040
regional part of forebrain1.03e-1839
forebrain1.03e-1839
future forebrain1.03e-1839
occipital lobe1.00e-1710
visual cortex1.00e-1710
neocortex1.00e-1710
pre-chordal neural plate3.83e-1549
structure with developmental contribution from neural crest6.28e-1592
regional part of cerebral cortex1.72e-1317
posterior neural tube1.26e-1212
chordal neural plate1.26e-1212
cerebral cortex2.29e-1221
cerebral hemisphere2.29e-1221
pallium2.29e-1221
basal ganglion4.52e-128
nuclear complex of neuraxis4.52e-128
aggregate regional part of brain4.52e-128
collection of basal ganglia4.52e-128
cerebral subcortex4.52e-128
spinal cord1.23e-096
dorsal region element1.23e-096
dorsum1.23e-096
tube1.88e-09114
anatomical conduit5.63e-09122
regional part of spinal cord4.64e-085
gray matter of spinal cord4.64e-085
corpus striatum9.44e-085
striatum9.44e-085
ventral part of telencephalon9.44e-085
future corpus striatum9.44e-085
regional part of midbrain1.36e-074
midbrain1.36e-074
presumptive midbrain1.36e-074
midbrain neural tube1.36e-074
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