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FFCP PHASE1:Mm9::chr2:96158092..96158104,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=241568
|EntrezGene=241568
|HGNC=
|HGNC=
|MCL_coexpression_id=20
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=Q8C031
|UniProt=Q8C031
|association_with_transcript=-221bp_to_ENSMUST00000135431,uc008lhc.1,uc008lhd.1_5end
|association_with_transcript=-221bp_to_ENSMUST00000135431,uc008lhc.1,uc008lhd.1_5end
|cluster_id=chr2:96158092..96158104,+
|description=CAGE_peak_5_at_Lrrc4c_5end
|description=CAGE_peak_5_at_Lrrc4c_5end
|id=chr2:96158092..96158104,+
|id=chr2:96158092..96158104,+
|ontology_enrichment_celltype=CL:0000117!8.05e-10!23;CL:0000337!8.05e-10!23
|ontology_enrichment_celltype=CL:0000117!8.05e-10!23;CL:0000337!8.05e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.03e-16,23;CL:0000337,4.03e-16,23;CL:0000540,4.20e-10,33;CL:0000047,4.20e-10,33;CL:0000031,4.20e-10,33;CL:0000404,4.20e-10,33;CL:0000393,5.33e-08,39;CL:0000211,5.33e-08,39;CL:0002612,4.09e-07,3;CL:0002319,6.19e-07,43;CL:0002614,8.48e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!3.43e-19!63;UBERON:0001049!2.72e-18!52;UBERON:0005068!2.72e-18!52;UBERON:0006241!2.72e-18!52;UBERON:0007135!2.72e-18!52;UBERON:0000955!2.19e-16!50;UBERON:0006238!2.19e-16!50;UBERON:0002020!3.88e-16!34;UBERON:0002346!6.63e-16!71;UBERON:0003075!6.63e-16!71;UBERON:0007284!6.63e-16!71;UBERON:0002616!1.11e-15!49;UBERON:0001017!1.91e-15!73;UBERON:0005743!1.91e-15!73;UBERON:0000073!1.39e-14!75;UBERON:0001016!1.39e-14!75;UBERON:0003056!3.12e-14!49;UBERON:0002791!4.73e-12!29;UBERON:0003528!4.73e-12!29;UBERON:0001893!4.73e-12!29;UBERON:0004121!6.97e-12!102;UBERON:0000924!6.97e-12!102;UBERON:0006601!6.97e-12!102;UBERON:0003080!2.00e-11!40;UBERON:0002780!1.23e-10!39;UBERON:0001890!1.23e-10!39;UBERON:0006240!1.23e-10!39;UBERON:0007811!9.44e-10!86;UBERON:0000025!3.17e-09!114;UBERON:0002021!5.62e-09!10;UBERON:0000411!5.62e-09!10;UBERON:0001950!5.62e-09!10;UBERON:0004111!1.44e-08!122;UBERON:0003076!3.15e-08!12;UBERON:0003057!3.15e-08!12;UBERON:0000153!3.83e-08!94;UBERON:0002420!5.21e-08!8;UBERON:0007245!5.21e-08!8;UBERON:0010009!5.21e-08!8;UBERON:0010011!5.21e-08!8;UBERON:0000454!5.21e-08!8;UBERON:0002619!1.76e-07!17;UBERON:0002298!5.47e-07!6;UBERON:0002240!7.98e-07!6;UBERON:0005174!7.98e-07!6;UBERON:0001137!7.98e-07!6
|ontology_enrichment_uberon=UBERON:0000033!3.43e-19!63;UBERON:0001049!2.72e-18!52;UBERON:0005068!2.72e-18!52;UBERON:0006241!2.72e-18!52;UBERON:0007135!2.72e-18!52;UBERON:0000955!2.19e-16!50;UBERON:0006238!2.19e-16!50;UBERON:0002020!3.88e-16!34;UBERON:0002346!6.63e-16!71;UBERON:0003075!6.63e-16!71;UBERON:0007284!6.63e-16!71;UBERON:0002616!1.11e-15!49;UBERON:0001017!1.91e-15!73;UBERON:0005743!1.91e-15!73;UBERON:0000073!1.39e-14!75;UBERON:0001016!1.39e-14!75;UBERON:0003056!3.12e-14!49;UBERON:0002791!4.73e-12!29;UBERON:0003528!4.73e-12!29;UBERON:0001893!4.73e-12!29;UBERON:0004121!6.97e-12!102;UBERON:0000924!6.97e-12!102;UBERON:0006601!6.97e-12!102;UBERON:0003080!2.00e-11!40;UBERON:0002780!1.23e-10!39;UBERON:0001890!1.23e-10!39;UBERON:0006240!1.23e-10!39;UBERON:0007811!9.44e-10!86;UBERON:0000025!3.17e-09!114;UBERON:0002021!5.62e-09!10;UBERON:0000411!5.62e-09!10;UBERON:0001950!5.62e-09!10;UBERON:0004111!1.44e-08!122;UBERON:0003076!3.15e-08!12;UBERON:0003057!3.15e-08!12;UBERON:0000153!3.83e-08!94;UBERON:0002420!5.21e-08!8;UBERON:0007245!5.21e-08!8;UBERON:0010009!5.21e-08!8;UBERON:0010011!5.21e-08!8;UBERON:0000454!5.21e-08!8;UBERON:0002619!1.76e-07!17;UBERON:0002298!5.47e-07!6;UBERON:0002240!7.98e-07!6;UBERON:0005174!7.98e-07!6;UBERON:0001137!7.98e-07!6
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.81e-36,54;UBERON:0001049,2.30e-33,52;UBERON:0005068,2.30e-33,52;UBERON:0006241,2.30e-33,52;UBERON:0007135,2.30e-33,52;UBERON:0001017,3.30e-30,73;UBERON:0001016,3.69e-29,75;UBERON:0002346,5.35e-29,64;UBERON:0003075,5.35e-29,64;UBERON:0007284,5.35e-29,64;UBERON:0002020,7.52e-28,34;UBERON:0000955,4.48e-25,47;UBERON:0006238,4.48e-25,47;UBERON:0010371,2.32e-24,73;UBERON:0004121,8.76e-24,95;UBERON:0000924,8.76e-24,95;UBERON:0006601,8.76e-24,95;UBERON:0002616,1.01e-23,46;UBERON:0010314,3.35e-20,92;UBERON:0003528,9.71e-20,29;UBERON:0002791,9.71e-20,29;UBERON:0001893,9.71e-20,29;UBERON:0003080,9.42e-19,40;UBERON:0002780,3.18e-17,39;UBERON:0001890,3.18e-17,39;UBERON:0006240,3.18e-17,39;UBERON:0003056,4.15e-17,49;UBERON:0003076,1.44e-16,12;UBERON:0003057,1.44e-16,12;UBERON:0002420,6.81e-15,8;UBERON:0007245,6.81e-15,8;UBERON:0010009,6.81e-15,8;UBERON:0010011,6.81e-15,8;UBERON:0000454,6.81e-15,8;UBERON:0002021,2.77e-14,10;UBERON:0000411,2.77e-14,10;UBERON:0001950,2.77e-14,10;UBERON:0000025,1.16e-12,114;UBERON:0002240,1.88e-12,6;UBERON:0005174,1.88e-12,6;UBERON:0001137,1.88e-12,6;UBERON:0004111,2.80e-11,122;UBERON:0001948,2.19e-10,5;UBERON:0002315,2.19e-10,5;UBERON:0000369,1.11e-09,5;UBERON:0002435,1.11e-09,5;UBERON:0000204,1.11e-09,5;UBERON:0010082,1.11e-09,5;UBERON:0002619,2.55e-09,17;UBERON:0002950,7.89e-09,4;UBERON:0001891,7.89e-09,4;UBERON:0009616,7.89e-09,4;UBERON:0010286,7.89e-09,4;UBERON:0000956,8.38e-09,21;UBERON:0001869,8.38e-09,21;UBERON:0000203,8.38e-09,21;UBERON:0002257,4.09e-07,3;UBERON:0002038,8.48e-07,3;UBERON:0009663,8.48e-07,3;UBERON:0009661,8.48e-07,3;UBERON:0000125,8.48e-07,3;UBERON:0002308,8.48e-07,3
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,1.41621522601718,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,2.57085885963423,2.42955395046775,0.489963196859816,0.0958454710182364,0,1.10115880999389,2.93680877595932,4.45458946443106,1.45074916503213,2.47016637726506,2.08365348222704,3.35019598801657,3.37657566019008,2.29197371665215,5.30331453852602,4.55589378557129,2.60959224155421,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.44117753425404,5.23616767033638,0,0,0,0,8.08869452786043,8.6925114535539,1.38219787324151,2.60736480288415,1.53429274398198,4.1557608911912,6.16516799657479,0.101839363850316,0,0,0.210441855886474,0,0.229902104433473,0.360124259610698,0.60281927134286,0.748401490664606,1.0249097622788,0.374806898238915,1.03481348295606,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0.720248245844059,0.946978942340841,1.96764231747404,1.07986979021165,0.930135779001631,0.536546802799238,0.817357396570186,0.329119699826961,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.536825675041487,1.05144974282064,0.308713837137853,0,0,0,0.696710015581316,0,0.201683524623343,0.444756087689741,0.190225626112559,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0.335012514883631,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,8.0275294993896,5.86058432961016,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.532020700926821,0,0,0,0,0,0,0,0,0,0,0,0,9.27126510052548,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.324016022465404,0,0,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0.564751842617067,4.14292712856459,1.14579102687879,1.71853182343688,2.74033007908257,1.5107877947794,2.02506750069542,3.15224842256954,1.81256963593682,3.10656187051092,0,0.399024873401031,0.853668028770671,0.729320151204882,0.209613162627982,0.551530525350042,0.44449345560323,0.412070114477788,1.28367683836726,0.252697211763798,0,1.13175804831646,0.842773567228942,0.768301828858431,0.516919220600519,0.476293691283074,0.463537303779422,0.578727661391115,0.412085900803307,0.147198920134397,1.02860775715625,0.532427418478012,0.238436189947321,0.872078499793971,0.376437521661322,0.338458431566706,0,1.05227884575137,0.271608227691724,0,1.06771516311757,0.985044823755635,1.22769312950907,0.619747364743864,0,0,0.467863216890817,0.644613162144895,0.382576664137687,0,0.231867835620421
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,1.41621522601718,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,2.57085885963423,2.42955395046775,0.489963196859816,0.0958454710182364,0,1.10115880999389,2.93680877595932,4.45458946443106,1.45074916503213,2.47016637726506,2.08365348222704,3.35019598801657,3.37657566019008,2.29197371665215,5.30331453852602,4.55589378557129,2.60959224155421,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.44117753425404,5.23616767033638,0,0,0,0,8.08869452786043,8.6925114535539,1.38219787324151,2.60736480288415,1.53429274398198,4.1557608911912,6.16516799657479,0.101839363850316,0,0,0.210441855886474,0,0.229902104433473,0.360124259610698,0.60281927134286,0.748401490664606,1.0249097622788,0.374806898238915,1.03481348295606,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0.720248245844059,0.946978942340841,1.96764231747404,1.07986979021165,0.930135779001631,0.536546802799238,0.817357396570186,0.329119699826961,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.536825675041487,1.05144974282064,0.308713837137853,0,0,0,0.696710015581316,0,0.201683524623343,0.444756087689741,0.190225626112559,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0.335012514883631,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,8.0275294993896,5.86058432961016,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.532020700926821,0,0,0,0,0,0,0,0,0,0,0,0,9.27126510052548,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.324016022465404,0,0,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0.564751842617067,4.14292712856459,1.14579102687879,1.71853182343688,2.74033007908257,1.5107877947794,2.02506750069542,3.15224842256954,1.81256963593682,3.10656187051092,0,0.399024873401031,0.853668028770671,0.729320151204882,0.209613162627982,0.551530525350042,0.44449345560323,0.412070114477788,1.28367683836726,0.252697211763798,0,1.13175804831646,0.842773567228942,0.768301828858431,0.516919220600519,0.476293691283074,0.463537303779422,0.578727661391115,0.412085900803307,0.147198920134397,1.02860775715625,0.532427418478012,0.238436189947321,0.872078499793971,0.376437521661322,0.338458431566706,0,1.05227884575137,0.271608227691724,0,1.06771516311757,0.985044823755635,1.22769312950907,0.619747364743864,0,0,0.467863216890817,0.644613162144895,0.382576664137687,0,0.231867835620421
|short_description=p5@Lrrc4c
|short_description=p5@Lrrc4c
}}
}}

Latest revision as of 03:55, 27 September 2015

Short description:p5@Lrrc4c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Lrrc4c_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: -221bp_to_ENSMUST00000135431, uc008lhc.1, uc008lhd.1_5end
EntrezGene:Lrrc4c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Lrrc4c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.44
cerebellum, neonate N30.CNhs11135.1395-42I25.24
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.09
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B26.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.03
medulla oblongata, neonate N30.CNhs11200.1396-42A35.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C99.27
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.81e-3654
neural tube2.30e-3352
neural rod2.30e-3352
future spinal cord2.30e-3352
neural keel2.30e-3352
central nervous system3.30e-3073
nervous system3.69e-2975
neurectoderm5.35e-2964
neural plate5.35e-2964
presumptive neural plate5.35e-2964
gray matter7.52e-2834
brain4.48e-2547
future brain4.48e-2547
ecto-epithelium2.32e-2473
ectoderm-derived structure8.76e-2495
ectoderm8.76e-2495
presumptive ectoderm8.76e-2495
regional part of brain1.01e-2346
structure with developmental contribution from neural crest3.35e-2092
brain grey matter9.71e-2029
regional part of telencephalon9.71e-2029
telencephalon9.71e-2029
anterior neural tube9.42e-1940
regional part of forebrain3.18e-1739
forebrain3.18e-1739
future forebrain3.18e-1739
pre-chordal neural plate4.15e-1749
posterior neural tube1.44e-1612
chordal neural plate1.44e-1612
basal ganglion6.81e-158
nuclear complex of neuraxis6.81e-158
aggregate regional part of brain6.81e-158
collection of basal ganglia6.81e-158
cerebral subcortex6.81e-158
occipital lobe2.77e-1410
visual cortex2.77e-1410
neocortex2.77e-1410
tube1.16e-12114
spinal cord1.88e-126
dorsal region element1.88e-126
dorsum1.88e-126
anatomical conduit2.80e-11122
regional part of spinal cord2.19e-105
gray matter of spinal cord2.19e-105
corpus striatum1.11e-095
striatum1.11e-095
ventral part of telencephalon1.11e-095
future corpus striatum1.11e-095
regional part of cerebral cortex2.55e-0917
regional part of midbrain7.89e-094
midbrain7.89e-094
presumptive midbrain7.89e-094
midbrain neural tube7.89e-094
cerebral cortex8.38e-0921
cerebral hemisphere8.38e-0921
pallium8.38e-0921
ventral horn of spinal cord4.09e-073
substantia nigra8.48e-073
telencephalic nucleus8.48e-073
midbrain nucleus8.48e-073
neural nucleus8.48e-073
nucleus of brain8.48e-073
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