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FFCP PHASE1:Mm9::chr2:96158171..96158214,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=241568
|EntrezGene=241568
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8C031
|UniProt=Q8C031
|association_with_transcript=-111bp_to_ENSMUST00000135431,uc008lhc.1,uc008lhd.1_5end
|association_with_transcript=-111bp_to_ENSMUST00000135431,uc008lhc.1,uc008lhd.1_5end
|cluster_id=chr2:96158171..96158214,+
|description=CAGE_peak_2_at_Lrrc4c_5end
|description=CAGE_peak_2_at_Lrrc4c_5end
|id=chr2:96158171..96158214,+
|id=chr2:96158171..96158214,+
|ontology_enrichment_celltype=CL:0000117!1.97e-13!23;CL:0000337!1.97e-13!23;CL:0000540!7.34e-09!33;CL:0000047!7.34e-09!33;CL:0000031!7.34e-09!33;CL:0000404!7.34e-09!33;CL:0000221!5.69e-07!44;CL:0000133!5.69e-07!44;CL:0002319!9.34e-07!43
|ontology_enrichment_celltype=CL:0000117!1.97e-13!23;CL:0000337!1.97e-13!23;CL:0000540!7.34e-09!33;CL:0000047!7.34e-09!33;CL:0000031!7.34e-09!33;CL:0000404!7.34e-09!33;CL:0000221!5.69e-07!44;CL:0000133!5.69e-07!44;CL:0002319!9.34e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,9.04e-11,23;CL:0000337,9.04e-11,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!7.84e-25!63;UBERON:0002346!5.21e-22!71;UBERON:0003075!5.21e-22!71;UBERON:0007284!5.21e-22!71;UBERON:0001049!5.99e-22!52;UBERON:0005068!5.99e-22!52;UBERON:0006241!5.99e-22!52;UBERON:0007135!5.99e-22!52;UBERON:0000073!1.10e-21!75;UBERON:0001016!1.10e-21!75;UBERON:0001017!3.37e-21!73;UBERON:0005743!3.37e-21!73;UBERON:0002020!6.54e-21!34;UBERON:0000955!9.65e-21!50;UBERON:0006238!9.65e-21!50;UBERON:0002616!5.51e-20!49;UBERON:0003056!6.43e-20!49;UBERON:0004121!2.44e-19!102;UBERON:0000924!2.44e-19!102;UBERON:0006601!2.44e-19!102;UBERON:0002791!2.57e-17!29;UBERON:0003528!2.57e-17!29;UBERON:0001893!2.57e-17!29;UBERON:0003080!1.40e-15!40;UBERON:0002780!1.13e-14!39;UBERON:0001890!1.13e-14!39;UBERON:0006240!1.13e-14!39;UBERON:0007811!2.04e-13!86;UBERON:0000153!1.72e-11!94;UBERON:0002021!3.09e-11!10;UBERON:0000411!3.09e-11!10;UBERON:0001950!3.09e-11!10;UBERON:0000956!4.40e-11!21;UBERON:0001869!4.40e-11!21;UBERON:0000203!4.40e-11!21;UBERON:0002619!1.22e-10!17;UBERON:0002420!1.08e-07!8;UBERON:0007245!1.08e-07!8;UBERON:0010009!1.08e-07!8;UBERON:0010011!1.08e-07!8;UBERON:0000454!1.08e-07!8;UBERON:0000025!3.46e-07!114;UBERON:0003076!4.03e-07!12;UBERON:0003057!4.03e-07!12;UBERON:0002298!9.64e-07!6
|ontology_enrichment_uberon=UBERON:0000033!7.84e-25!63;UBERON:0002346!5.21e-22!71;UBERON:0003075!5.21e-22!71;UBERON:0007284!5.21e-22!71;UBERON:0001049!5.99e-22!52;UBERON:0005068!5.99e-22!52;UBERON:0006241!5.99e-22!52;UBERON:0007135!5.99e-22!52;UBERON:0000073!1.10e-21!75;UBERON:0001016!1.10e-21!75;UBERON:0001017!3.37e-21!73;UBERON:0005743!3.37e-21!73;UBERON:0002020!6.54e-21!34;UBERON:0000955!9.65e-21!50;UBERON:0006238!9.65e-21!50;UBERON:0002616!5.51e-20!49;UBERON:0003056!6.43e-20!49;UBERON:0004121!2.44e-19!102;UBERON:0000924!2.44e-19!102;UBERON:0006601!2.44e-19!102;UBERON:0002791!2.57e-17!29;UBERON:0003528!2.57e-17!29;UBERON:0001893!2.57e-17!29;UBERON:0003080!1.40e-15!40;UBERON:0002780!1.13e-14!39;UBERON:0001890!1.13e-14!39;UBERON:0006240!1.13e-14!39;UBERON:0007811!2.04e-13!86;UBERON:0000153!1.72e-11!94;UBERON:0002021!3.09e-11!10;UBERON:0000411!3.09e-11!10;UBERON:0001950!3.09e-11!10;UBERON:0000956!4.40e-11!21;UBERON:0001869!4.40e-11!21;UBERON:0000203!4.40e-11!21;UBERON:0002619!1.22e-10!17;UBERON:0002420!1.08e-07!8;UBERON:0007245!1.08e-07!8;UBERON:0010009!1.08e-07!8;UBERON:0010011!1.08e-07!8;UBERON:0000454!1.08e-07!8;UBERON:0000025!3.46e-07!114;UBERON:0003076!4.03e-07!12;UBERON:0003057!4.03e-07!12;UBERON:0002298!9.64e-07!6
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.58e-36,54;UBERON:0001049,3.31e-33,52;UBERON:0005068,3.31e-33,52;UBERON:0006241,3.31e-33,52;UBERON:0007135,3.31e-33,52;UBERON:0002020,8.64e-29,34;UBERON:0001017,3.04e-28,73;UBERON:0000955,4.96e-28,47;UBERON:0006238,4.96e-28,47;UBERON:0002346,2.83e-27,64;UBERON:0003075,2.83e-27,64;UBERON:0007284,2.83e-27,64;UBERON:0001016,2.99e-27,75;UBERON:0002616,1.18e-26,46;UBERON:0003528,6.21e-24,29;UBERON:0002791,6.21e-24,29;UBERON:0001893,6.21e-24,29;UBERON:0010371,7.18e-23,73;UBERON:0003080,5.50e-22,40;UBERON:0002021,4.87e-21,10;UBERON:0000411,4.87e-21,10;UBERON:0001950,4.87e-21,10;UBERON:0004121,5.10e-21,95;UBERON:0000924,5.10e-21,95;UBERON:0006601,5.10e-21,95;UBERON:0002780,2.35e-20,39;UBERON:0001890,2.35e-20,39;UBERON:0006240,2.35e-20,39;UBERON:0003056,1.80e-18,49;UBERON:0010314,1.30e-17,92;UBERON:0002420,6.55e-14,8;UBERON:0007245,6.55e-14,8;UBERON:0010009,6.55e-14,8;UBERON:0010011,6.55e-14,8;UBERON:0000454,6.55e-14,8;UBERON:0002619,1.41e-13,17;UBERON:0000956,1.33e-12,21;UBERON:0001869,1.33e-12,21;UBERON:0000203,1.33e-12,21;UBERON:0003076,9.85e-12,12;UBERON:0003057,9.85e-12,12;UBERON:0000025,1.37e-11,114;UBERON:0004111,2.70e-10,122;UBERON:0000369,4.12e-09,5;UBERON:0002435,4.12e-09,5;UBERON:0000204,4.12e-09,5;UBERON:0010082,4.12e-09,5;UBERON:0002950,2.12e-08,4;UBERON:0001891,2.12e-08,4;UBERON:0009616,2.12e-08,4;UBERON:0010286,2.12e-08,4;UBERON:0002240,1.24e-07,6;UBERON:0005174,1.24e-07,6;UBERON:0001137,1.24e-07,6
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0,0.210324961351382,0.571301968807607,1.76694832761291,0.367472397644862,0.0958454710182364,0.919218786610021,4.40463523997555,5.36286819957788,4.45458946443106,1.18697658957174,2.10421580285542,1.56274011167028,2.51264699101243,4.50210088025344,4.43114918552749,2.65165726926301,3.84403538157578,1.4911955666024,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,5.85561594023094,5.44561437714983,0,0,0,0,15.1288545798871,10.0650132620098,3.01570445070875,9.03886464999838,10.4843337505436,4.36354893575076,7.46309810111685,0,0,0,0.420883711772948,0.130120442962704,0.229902104433473,0.360124259610698,0.30140963567143,0.816437989815934,0.896796041993948,0.843315521037559,2.32833033665114,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0.36012412292203,0.710234206755631,0.590292695242212,1.23413690309903,0.465067889500816,0.536546802799238,0.233530684734339,0.16455984991348,0,0,0.292399974850665,0,0.268412837520744,2.3131894342054,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06422595946285,9.49414661396846,0,0,0,0,0.215423397732799,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,7.97328798645192,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.471277639256,9.66682996665071,15.4681788628637,10.998603669996,8.90607275701835,15.8632718451837,8.10027000278167,10.8077088773813,13.1411298605419,13.9795284172991,0.103787347584177,0.798049746802062,1.36586884603307,0,0,0.367687016900028,0.888986911206461,1.23621034343337,0.320919209591815,0.758091635291392,0.50695859978048,0.754505365544305,1.591905626988,0.576226371643824,0.574354689556133,0.476293691283074,1.0429589335037,0.192909220463705,0.412085900803307,0.735994600671987,0.685738504770831,0.354951612318675,1.43061713968393,1.16277133305863,0.941093804153306,0.761531471025089,1.09756783723664,0.263069711437843,0.814824683075171,0,0.711810108745045,0.788035859004508,1.22769312950907,0.77468420592983,0.385813221962283,0.749431733813838,0.701794825336225,0.214871054048298,0.191288332068843,0,0
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0,0.210324961351382,0.571301968807607,1.76694832761291,0.367472397644862,0.0958454710182364,0.919218786610021,4.40463523997555,5.36286819957788,4.45458946443106,1.18697658957174,2.10421580285542,1.56274011167028,2.51264699101243,4.50210088025344,4.43114918552749,2.65165726926301,3.84403538157578,1.4911955666024,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,5.85561594023094,5.44561437714983,0,0,0,0,15.1288545798871,10.0650132620098,3.01570445070875,9.03886464999838,10.4843337505436,4.36354893575076,7.46309810111685,0,0,0,0.420883711772948,0.130120442962704,0.229902104433473,0.360124259610698,0.30140963567143,0.816437989815934,0.896796041993948,0.843315521037559,2.32833033665114,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0.36012412292203,0.710234206755631,0.590292695242212,1.23413690309903,0.465067889500816,0.536546802799238,0.233530684734339,0.16455984991348,0,0,0.292399974850665,0,0.268412837520744,2.3131894342054,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06422595946285,9.49414661396846,0,0,0,0,0.215423397732799,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,7.97328798645192,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.471277639256,9.66682996665071,15.4681788628637,10.998603669996,8.90607275701835,15.8632718451837,8.10027000278167,10.8077088773813,13.1411298605419,13.9795284172991,0.103787347584177,0.798049746802062,1.36586884603307,0,0,0.367687016900028,0.888986911206461,1.23621034343337,0.320919209591815,0.758091635291392,0.50695859978048,0.754505365544305,1.591905626988,0.576226371643824,0.574354689556133,0.476293691283074,1.0429589335037,0.192909220463705,0.412085900803307,0.735994600671987,0.685738504770831,0.354951612318675,1.43061713968393,1.16277133305863,0.941093804153306,0.761531471025089,1.09756783723664,0.263069711437843,0.814824683075171,0,0.711810108745045,0.788035859004508,1.22769312950907,0.77468420592983,0.385813221962283,0.749431733813838,0.701794825336225,0.214871054048298,0.191288332068843,0,0
|short_description=p2@Lrrc4c
|short_description=p2@Lrrc4c
}}
}}

Latest revision as of 03:55, 27 September 2015

Short description:p2@Lrrc4c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lrrc4c_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -111bp_to_ENSMUST00000135431, uc008lhc.1, uc008lhd.1_5end
EntrezGene:Lrrc4c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lrrc4c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A415.13
corpus striatum, adult.CNhs10487.19-21D810.07
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D59.04
cortex, neonate N30.CNhs11107.1392-42F210.48
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B27.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C27.06
medulla oblongata, neonate N30.CNhs11200.1396-42A39.49
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C97.97
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.98
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.04e-1123
neuroblast (sensu Vertebrata)9.04e-1123

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.58e-3654
neural tube3.31e-3352
neural rod3.31e-3352
future spinal cord3.31e-3352
neural keel3.31e-3352
gray matter8.64e-2934
central nervous system3.04e-2873
brain4.96e-2847
future brain4.96e-2847
neurectoderm2.83e-2764
neural plate2.83e-2764
presumptive neural plate2.83e-2764
nervous system2.99e-2775
regional part of brain1.18e-2646
brain grey matter6.21e-2429
regional part of telencephalon6.21e-2429
telencephalon6.21e-2429
ecto-epithelium7.18e-2373
anterior neural tube5.50e-2240
occipital lobe4.87e-2110
visual cortex4.87e-2110
neocortex4.87e-2110
ectoderm-derived structure5.10e-2195
ectoderm5.10e-2195
presumptive ectoderm5.10e-2195
regional part of forebrain2.35e-2039
forebrain2.35e-2039
future forebrain2.35e-2039
pre-chordal neural plate1.80e-1849
structure with developmental contribution from neural crest1.30e-1792
basal ganglion6.55e-148
nuclear complex of neuraxis6.55e-148
aggregate regional part of brain6.55e-148
collection of basal ganglia6.55e-148
cerebral subcortex6.55e-148
regional part of cerebral cortex1.41e-1317
cerebral cortex1.33e-1221
cerebral hemisphere1.33e-1221
pallium1.33e-1221
posterior neural tube9.85e-1212
chordal neural plate9.85e-1212
tube1.37e-11114
anatomical conduit2.70e-10122
corpus striatum4.12e-095
striatum4.12e-095
ventral part of telencephalon4.12e-095
future corpus striatum4.12e-095
regional part of midbrain2.12e-084
midbrain2.12e-084
presumptive midbrain2.12e-084
midbrain neural tube2.12e-084
spinal cord1.24e-076
dorsal region element1.24e-076
dorsum1.24e-076
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