FFCP PHASE1:Mm9::chr3:106904618..106904630,+: Difference between revisions
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{{FFCP|EntrezGene=16490|HGNC=|MCL_coexpression_id=20|UniProt=P63141,B2RS05,Q3TZ64|association_with_transcript=133bp_to_ENSMUST00000038695,NM_008417,uc008qws.1_5end|description=CAGE_peak_2_at_Kcna2_5end|id=chr3:106904618..106904630,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,7.11e-11,3;CL:0002614,3.13e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!5.65e-24!63;UBERON:0000955!5.25e-23!50;UBERON:0006238!5.25e-23!50;UBERON:0001049!6.60e-23!52;UBERON:0005068!6.60e-23!52;UBERON:0006241!6.60e-23!52;UBERON:0007135!6.60e-23!52;UBERON:0002616!5.95e-22!49;UBERON:0001017!4.27e-21!73;UBERON:0005743!4.27e-21!73;UBERON:0002346!4.82e-21!71;UBERON:0003075!4.82e-21!71;UBERON:0007284!4.82e-21!71;UBERON:0000073!3.27e-20!75;UBERON:0001016!3.27e-20!75;UBERON:0004121!2.43e-19!102;UBERON:0000924!2.43e-19!102;UBERON:0006601!2.43e-19!102;UBERON:0003056!5.62e-17!49;UBERON:0007811!2.30e-15!86;UBERON:0002020!3.71e-15!34;UBERON:0003080!4.48e-15!40;UBERON:0000153!5.08e-14!94;UBERON:0002021!5.41e-14!10;UBERON:0000411!5.41e-14!10;UBERON:0001950!5.41e-14!10;UBERON:0002780!5.97e-14!39;UBERON:0001890!5.97e-14!39;UBERON:0006240!5.97e-14!39;UBERON:0002791!4.05e-12!29;UBERON:0003528!4.05e-12!29;UBERON:0001893!4.05e-12!29;UBERON:0002298!9.93e-10!6;UBERON:0000956!3.11e-09!21;UBERON:0001869!3.11e-09!21;UBERON:0000203!3.11e-09!21;UBERON:0003076!8.78e-09!12;UBERON:0003057!8.78e-09!12;UBERON:0002619!9.61e-09!17;UBERON:0000025!5.31e-08!114;UBERON:0004111!2.28e-07!122;UBERON:0002950!7.65e-07!4;UBERON:0001891!7.65e-07!4;UBERON:0009616!7.65e-07!4;UBERON:0007023!9.30e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.49e-36,54;UBERON:0002616,1.10e-32,46;UBERON:0000955,6.76e-32,47;UBERON:0006238,6.76e-32,47;UBERON:0001049,1.92e-31,52;UBERON:0005068,1.92e-31,52;UBERON:0006241,1.92e-31,52;UBERON:0007135,1.92e-31,52;UBERON:0002021,1.40e-29,10;UBERON:0000411,1.40e-29,10;UBERON:0001950,1.40e-29,10;UBERON:0001017,5.50e-28,73;UBERON:0001016,4.07e-27,75;UBERON:0003080,7.03e-25,40;UBERON:0002346,1.03e-24,64;UBERON:0003075,1.03e-24,64;UBERON:0007284,1.03e-24,64;UBERON:0003528,1.19e-24,29;UBERON:0002791,1.19e-24,29;UBERON:0001893,1.19e-24,29;UBERON:0002780,1.38e-22,39;UBERON:0001890,1.38e-22,39;UBERON:0006240,1.38e-22,39;UBERON:0010371,4.07e-21,73;UBERON:0002020,1.48e-20,34;UBERON:0004121,1.99e-20,95;UBERON:0000924,1.99e-20,95;UBERON:0006601,1.99e-20,95;UBERON:0002619,3.01e-20,17;UBERON:0003056,1.29e-19,49;UBERON:0000956,2.11e-19,21;UBERON:0001869,2.11e-19,21;UBERON:0000203,2.11e-19,21;UBERON:0010314,8.05e-16,92;UBERON:0002950,1.83e-13,4;UBERON:0001891,1.83e-13,4;UBERON:0009616,1.83e-13,4;UBERON:0010286,1.83e-13,4;UBERON:0000025,7.00e-12,114;UBERON:0004684,7.11e-11,3;UBERON:0002275,7.11e-11,3;UBERON:0004111,8.47e-11,122;UBERON:0002038,3.13e-10,3;UBERON:0009663,3.13e-10,3;UBERON:0009661,3.13e-10,3;UBERON:0000125,3.13e-10,3;UBERON:0002308,3.13e-10,3;UBERON:0004733,2.97e-09,6;UBERON:0004732,2.97e-09,6;UBERON:0002028,2.97e-09,6;UBERON:0007277,2.97e-09,6;UBERON:0001896,3.97e-08,2;UBERON:0002298,3.97e-08,2;UBERON:0005290,3.97e-08,2;UBERON:0010096,3.97e-08,2;UBERON:0011216,1.65e-07,194;UBERON:0003076,5.78e-07,12;UBERON:0003057,5.78e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0.883474163806454,0,0,0,9.91042928994498,4.21368215681119,5.68344173048101,0,0.0914876436024097,0,4.74611098302348,2.8138130501584,3.97275444219706,0.294628585473668,0.569486723196412,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,4.39171195517321,3.35114730901528,0.255457055208591,0,0,0,9.43681028250383,1.83000241127451,0,8.69121600961382,4.09144731728529,4.1557608911912,2.10913641988085,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.384341160854549,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0.275936746304732,11.2385412991454,8.08760637486202,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0.963963949265421,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0.291480836629851,10.0129663085675,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,2.25900737046827,1.38097570952153,2.29158205375759,1.89038500578056,7.53590771747707,4.5323633843382,1.35004500046361,1.80128481289688,5.89085131679466,8.28416498802912,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p2@Kcna2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16490 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=P63141,B2RS05,Q3TZ64 | |||
|association_with_transcript=133bp_to_ENSMUST00000038695,NM_008417,uc008qws.1_5end | |||
|cluster_id=chr3:106904618..106904630,+ | |||
|description=CAGE_peak_2_at_Kcna2_5end | |||
|id=chr3:106904618..106904630,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,7.11e-11,3;CL:0002614,3.13e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.65e-24!63;UBERON:0000955!5.25e-23!50;UBERON:0006238!5.25e-23!50;UBERON:0001049!6.60e-23!52;UBERON:0005068!6.60e-23!52;UBERON:0006241!6.60e-23!52;UBERON:0007135!6.60e-23!52;UBERON:0002616!5.95e-22!49;UBERON:0001017!4.27e-21!73;UBERON:0005743!4.27e-21!73;UBERON:0002346!4.82e-21!71;UBERON:0003075!4.82e-21!71;UBERON:0007284!4.82e-21!71;UBERON:0000073!3.27e-20!75;UBERON:0001016!3.27e-20!75;UBERON:0004121!2.43e-19!102;UBERON:0000924!2.43e-19!102;UBERON:0006601!2.43e-19!102;UBERON:0003056!5.62e-17!49;UBERON:0007811!2.30e-15!86;UBERON:0002020!3.71e-15!34;UBERON:0003080!4.48e-15!40;UBERON:0000153!5.08e-14!94;UBERON:0002021!5.41e-14!10;UBERON:0000411!5.41e-14!10;UBERON:0001950!5.41e-14!10;UBERON:0002780!5.97e-14!39;UBERON:0001890!5.97e-14!39;UBERON:0006240!5.97e-14!39;UBERON:0002791!4.05e-12!29;UBERON:0003528!4.05e-12!29;UBERON:0001893!4.05e-12!29;UBERON:0002298!9.93e-10!6;UBERON:0000956!3.11e-09!21;UBERON:0001869!3.11e-09!21;UBERON:0000203!3.11e-09!21;UBERON:0003076!8.78e-09!12;UBERON:0003057!8.78e-09!12;UBERON:0002619!9.61e-09!17;UBERON:0000025!5.31e-08!114;UBERON:0004111!2.28e-07!122;UBERON:0002950!7.65e-07!4;UBERON:0001891!7.65e-07!4;UBERON:0009616!7.65e-07!4;UBERON:0007023!9.30e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.49e-36,54;UBERON:0002616,1.10e-32,46;UBERON:0000955,6.76e-32,47;UBERON:0006238,6.76e-32,47;UBERON:0001049,1.92e-31,52;UBERON:0005068,1.92e-31,52;UBERON:0006241,1.92e-31,52;UBERON:0007135,1.92e-31,52;UBERON:0002021,1.40e-29,10;UBERON:0000411,1.40e-29,10;UBERON:0001950,1.40e-29,10;UBERON:0001017,5.50e-28,73;UBERON:0001016,4.07e-27,75;UBERON:0003080,7.03e-25,40;UBERON:0002346,1.03e-24,64;UBERON:0003075,1.03e-24,64;UBERON:0007284,1.03e-24,64;UBERON:0003528,1.19e-24,29;UBERON:0002791,1.19e-24,29;UBERON:0001893,1.19e-24,29;UBERON:0002780,1.38e-22,39;UBERON:0001890,1.38e-22,39;UBERON:0006240,1.38e-22,39;UBERON:0010371,4.07e-21,73;UBERON:0002020,1.48e-20,34;UBERON:0004121,1.99e-20,95;UBERON:0000924,1.99e-20,95;UBERON:0006601,1.99e-20,95;UBERON:0002619,3.01e-20,17;UBERON:0003056,1.29e-19,49;UBERON:0000956,2.11e-19,21;UBERON:0001869,2.11e-19,21;UBERON:0000203,2.11e-19,21;UBERON:0010314,8.05e-16,92;UBERON:0002950,1.83e-13,4;UBERON:0001891,1.83e-13,4;UBERON:0009616,1.83e-13,4;UBERON:0010286,1.83e-13,4;UBERON:0000025,7.00e-12,114;UBERON:0004684,7.11e-11,3;UBERON:0002275,7.11e-11,3;UBERON:0004111,8.47e-11,122;UBERON:0002038,3.13e-10,3;UBERON:0009663,3.13e-10,3;UBERON:0009661,3.13e-10,3;UBERON:0000125,3.13e-10,3;UBERON:0002308,3.13e-10,3;UBERON:0004733,2.97e-09,6;UBERON:0004732,2.97e-09,6;UBERON:0002028,2.97e-09,6;UBERON:0007277,2.97e-09,6;UBERON:0001896,3.97e-08,2;UBERON:0002298,3.97e-08,2;UBERON:0005290,3.97e-08,2;UBERON:0010096,3.97e-08,2;UBERON:0011216,1.65e-07,194;UBERON:0003076,5.78e-07,12;UBERON:0003057,5.78e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0.883474163806454,0,0,0,9.91042928994498,4.21368215681119,5.68344173048101,0,0.0914876436024097,0,4.74611098302348,2.8138130501584,3.97275444219706,0.294628585473668,0.569486723196412,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,4.39171195517321,3.35114730901528,0.255457055208591,0,0,0,9.43681028250383,1.83000241127451,0,8.69121600961382,4.09144731728529,4.1557608911912,2.10913641988085,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.384341160854549,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0.275936746304732,11.2385412991454,8.08760637486202,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0.963963949265421,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0.291480836629851,10.0129663085675,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,2.25900737046827,1.38097570952153,2.29158205375759,1.89038500578056,7.53590771747707,4.5323633843382,1.35004500046361,1.80128481289688,5.89085131679466,8.28416498802912,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p2@Kcna2 | |||
}} |
Latest revision as of 06:40, 27 September 2015
Short description: | p2@Kcna2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kcna2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 133bp_to_ENSMUST00000038695, NM_008417, uc008qws.1_5end |
EntrezGene: | Kcna2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 7.11e-11 | 3 |
neuron of the substantia nigra | 3.13e-10 | 3 |